Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund26684 Selenicereus undatus HOM05D011323 ORTHO05D010674 0.0e+00 4358.5 2266 100.0
EL10Ac1g01580 Beta vulgaris HOM05D018884 ORTHO05D010674 4.1e-36 159.1 1122 25.0
AUR62026679 Chenopodium quinoa HOM05D018884 ORTHO05D010674 1.9e-25 123.6 1362 22.3
AUR62040588 Chenopodium quinoa HOM05D018884 ORTHO05D010674 5.9e-19 102.1 1418 21.4
Lj4C698G20 Lonicera japonica HOM05D011323 ORTHO05D010674 1.2e-16 94.4 325 32.6
Nitab4.5_0001344g0010 Nicotiana tabacum HOM05D011323 ORTHO05D010674 8.0e-16 91.7 236 35.2
Cc10_g15040 Coffea canephora HOM05D011323 ORTHO05D010674 3.0e-15 89.7 265 34.3
Peaxi162Scf00079g00245 Petunia axillaris HOM05D011323 ORTHO05D010674 1.7e-13 84.0 193 36.3
AT1G76740 Arabidopsis thaliana HOM05D010491 ORTHO05D012559 3.7e-13 82.8 127 44.9
Gohir.D05G245401 Gossypium hirsutum HOM05D013130 ORTHO05D022454 1.8e-12 80.5 114 42.1
DCAR_001148 Daucus carota HOM05D033900 ORTHO05D010674 3.1e-12 79.7 89 49.4
MD05G1029500 Malus domestica HOM05D012764 ORTHO05D017940 3.1e-12 79.7 301 28.6
Gorai.009G255200 Gossypium raimondii HOM05D013130 ORTHO05D022454 5.4e-12 79.0 114 41.2
COL.COLO4_29877 Corchorus olitorius HOM05D013130 ORTHO05D022454 5.9e-11 75.5 140 38.6
PGR044G2651 Punica granatum HOM05D012764 ORTHO05D010674 5.9e-11 75.5 196 34.2
RcHm_v2.0_Chr6g0274911 Rosa chinensis HOM05D012764 ORTHO05D017940 5.9e-11 75.5 160 37.5
Solyc04g071660.3 Solanum lycopersicum HOM05D011323 ORTHO05D010674 7.7e-11 75.1 255 31.4
Nn1g06053 Nelumbo nucifera HOM05D011323 ORTHO05D010674 1.3e-10 74.3 116 41.4
Thecc.08G155200 Theobroma cacao HOM05D013130 ORTHO05D022454 1.3e-10 74.3 217 32.3
Nitab4.5_0001187g0020 Nicotiana tabacum HOM05D011323 ORTHO05D010674 1.7e-10 73.9 384 26.3
Oeu051274.3 Olea europaea HOM05D027784 ORTHO05D010674 2.9e-10 73.2 343 28.3
PGSC0003DMG400006365 Solanum tuberosum HOM05D011323 ORTHO05D010674 2.9e-10 73.2 131 42.0
HanXRQChr11g0343441 Helianthus annuus HOM05D011323 ORTHO05D010674 3.8e-10 72.8 151 33.1
SGA_v2.0_scaffold108G30881 Striga asiatica HOM05D001241 ORTHO05D010674 3.8e-10 72.8 211 32.2
CiPaw.16G010100 Carya illinoinensis HOM05D015223 ORTHO05D010674 5.0e-10 72.4 178 38.8
FAN27G3106 Fragaria x ananassa HOM05D012764 ORTHO05D017940 6.6e-10 72.0 175 36.0
Prupe.8G035200 Prunus persica HOM05D012764 ORTHO05D017940 6.6e-10 72.0 223 33.2
AL2G36890 Arabidopsis lyrata HOM05D010491 ORTHO05D012559 8.6e-10 71.6 142 36.6
CSS0012606 Camellia sinensis var. sinensis HOM05D033310 ORTHO05D010674 8.6e-10 71.6 162 34.6
Duzib116G0432 Durio zibethinus HOM05D013130 ORTHO05D022454 8.6e-10 71.6 455 25.9
Sopen04g027650 Solanum pennellii HOM05D011323 ORTHO05D010674 8.6e-10 71.6 259 27.8
MSTRG.1096 Avicennia marina HOM05D027784 ORTHO05D010674 1.1e-09 71.2 167 35.3
Haze_17782 Corylus avellana HOM05D015223 ORTHO05D010674 1.5e-09 70.9 83 50.6
CARHR070280 Cardamine hirsuta HOM05D010491 ORTHO05D012559 2.5e-09 70.1 430 26.0
CDE11G0117 Ceratophyllum demersum HOM05D004299 ORTHO05D003557 4.3e-09 69.3 249 29.3
BolC6t40120H Brassica oleracea HOM05D010491 ORTHO05D012559 5.6e-09 68.9 200 30.0
BraA07t31765Z Brassica rapa HOM05D010491 ORTHO05D012559 7.3e-09 68.6 95 42.1
Cfa018307 Carpinus fangiana HOM05D015223 ORTHO05D010674 7.3e-09 68.6 83 48.2
Gohir.A05G244401 Gossypium hirsutum HOM05D013130 ORTHO05D022454 9.5e-09 68.2 365 28.2
CANSAT25G2759 Cannabis sativa HOM05D013130 ORTHO05D010674 2.1e-08 67.0 183 38.3
FAN20G3084 Fragaria x ananassa HOM05D012764 ORTHO05D017940 3.6e-08 66.2 160 36.9
RcHm_v2.0_Chr6g0274831 Rosa chinensis HOM05D012764 ORTHO05D010674 8.0e-08 65.1 110 38.2
FAN24G2902 Fragaria x ananassa HOM05D012764 ORTHO05D017940 1.4e-07 64.3 153 37.3
Lj7A375T60 Lonicera japonica HOM05D011323 ORTHO05D010674 1.4e-07 64.3 86 43.0
Sc02g0003890 Simmondsia chinensis HOM05D018884 ORTHO05D010674 3.0e-07 63.2 174 35.6
THA.LOC104812032 Tarenaya hassleriana HOM05D010491 ORTHO05D010674 3.0e-07 63.2 107 39.3
A07p42390 Brassica napus HOM05D010491 ORTHO05D012559 4.0e-07 62.8 300 26.3
C06p31820 Brassica napus HOM05D010491 ORTHO05D012559 4.0e-07 62.8 118 39.0
CDE02G2994 Ceratophyllum demersum HOM05D004299 ORTHO05D003557 4.0e-07 62.8 343 24.8
ECA247G3667 Erigeron canadensis HOM05D011323 ORTHO05D010674 4.0e-07 62.8 215 31.6
FvH4_2g13370 Fragaria vesca HOM05D012764 ORTHO05D017940 4.0e-07 62.8 151 37.1
BcaC08g45512 Brassica carinata HOM05D010491 ORTHO05D012559 5.2e-07 62.4 118 39.0
Thhalv10018017m.g Eutrema salsugineum HOM05D010491 ORTHO05D012559 5.2e-07 62.4 243 28.8
arahy.Tifrunner.gnm1.ann1.R835TB Arachis hypogaea HOM05D053442 ORTHO05D010674 8.9e-07 61.6 101 37.6
Carub.0002s2365 Capsella rubella HOM05D010491 ORTHO05D012559 8.9e-07 61.6 43 69.8
Migut.C00977 Erythranthe guttata HOM05D027784 ORTHO05D010674 8.9e-07 61.6 394 26.1
Aa31LG4G6810 Aethionema arabicum HOM05D010491 ORTHO05D012559 1.5e-06 60.8 358 27.7
Dinv25882 Davidia involucrata HOM05D016043 ORTHO05D010674 2.0e-06 60.5 157 33.8
A07p28380 Brassica napus HOM05D010491 ORTHO05D012559 2.6e-06 60.1 36 75.0
BraA07t30474Z Brassica rapa HOM05D010491 ORTHO05D012559 2.6e-06 60.1 36 75.0
Sp5g31880 Schrenkiella parvula HOM05D010491 ORTHO05D012559 2.6e-06 60.1 343 26.8
arahy.Tifrunner.gnm1.ann1.UU4M73 Arachis hypogaea HOM05D053442 ORTHO05D010674 4.4e-06 59.3 118 35.6
C06p50950 Brassica napus HOM05D010491 ORTHO05D012559 4.4e-06 59.3 350 26.0
TAR374G1619 Trochodendron aralioides HOM05D004299 ORTHO05D003557 4.4e-06 59.3 113 38.1
BcaB02g07074 Brassica carinata HOM05D010491 ORTHO05D012559 5.7e-06 58.9 114 36.0
FAN15G3692 Fragaria x ananassa HOM05D012764 ORTHO05D017940 7.5e-06 58.5 173 32.4
Sabra19G0058100 Salix brachista HOM05D004299 ORTHO05D003557 7.5e-06 58.5 41 65.9
Atru.chr13.2071 Acer truncatum HOM05D036810 ORTHO05D030759 9.8e-06 58.2 284 27.1
Manes.09G124200 Manihot esculenta HOM05D004299 ORTHO05D003557 9.8e-06 58.2 40 67.5


User provided reference genes

Program Settings