Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund26678 Selenicereus undatus HOM05D005921 ORTHO05D007374 1.1e-298 1029.2 525 100.0
EL10Ac1g01606 Beta vulgaris HOM05D005921 ORTHO05D007374 2.4e-205 719.2 525 66.9
Sc02g0003820 Simmondsia chinensis HOM05D005921 ORTHO05D007374 6.9e-189 664.5 491 69.2
GSVIVG01001409001 Vitis vinifera HOM05D005921 ORTHO05D007374 3.3e-183 645.6 523 61.8
Ah.05g168190 Amaranthus hybridus HOM05D005921 ORTHO05D007374 7.7e-180 634.4 519 62.0
Prupe.8G040700 Prunus persica HOM05D005921 ORTHO05D007374 2.9e-179 632.5 526 59.5
MD05G1033700 Malus domestica HOM05D005921 ORTHO05D007374 1.9e-178 629.8 523 61.2
Rhsim11G0087800 Rhododendron simsii HOM05D005921 ORTHO05D007374 3.6e-177 625.5 521 61.2
Thecc.08G159700 Theobroma cacao HOM05D005921 ORTHO05D007374 2.3e-176 622.9 515 59.8
Atru.chr13.2001 Acer truncatum HOM05D005921 ORTHO05D007374 1.1e-175 620.5 503 61.2
RcHm_v2.0_Chr6g0274201 Rosa chinensis HOM05D005921 ORTHO05D007374 1.5e-175 620.2 522 59.2
Lj5g0014499 Lotus japonicus HOM05D005921 ORTHO05D007374 2.6e-175 619.4 525 58.5
Eucgr.F04188 Eucalyptus grandis HOM05D005921 ORTHO05D007374 8.2e-174 614.4 526 59.1
Medtr1g097955 Medicago truncatula HOM05D005921 ORTHO05D007374 5.3e-173 611.7 524 57.8
vmacro01494 Vaccinium macrocarpon HOM05D005921 ORTHO05D007374 1.2e-172 610.5 501 61.3
TAR381G0629 Trochodendron aralioides HOM05D005921 ORTHO05D007374 1.6e-172 610.1 520 58.7
MBI01_g34168_MAGBIO Magnolia biondii HOM05D005921 ORTHO05D007374 4.5e-172 608.6 539 57.1
Cfa018279 Carpinus fangiana HOM05D005921 ORTHO05D007374 7.7e-172 607.8 487 61.6
Lalb_Chr02g0141581 Lupinus albus HOM05D005921 ORTHO05D007374 2.2e-171 606.3 450 64.2
arahy.Tifrunner.gnm1.ann1.9JVG50 Arachis hypogaea HOM05D005921 ORTHO05D007374 2.9e-171 605.9 543 56.9
Hma1.2p1_0358F.1_g134840 Hydrangea macrophylla HOM05D005921 ORTHO05D007374 2.9e-171 605.9 527 57.7
Potri.005G197000 Populus trichocarpa HOM05D005921 ORTHO05D007374 2.9e-171 605.9 523 58.9
Gorai.009G286300 Gossypium raimondii HOM05D005921 ORTHO05D007374 5.0e-171 605.1 487 61.2
FAN24G0054 Fragaria x ananassa HOM05D005921 ORTHO05D007374 6.5e-171 604.7 524 58.0
arahy.Tifrunner.gnm1.ann1.TV90AE Arachis hypogaea HOM05D005921 ORTHO05D007374 8.5e-171 604.4 489 60.1
Lalb_Chr06g0161731 Lupinus albus HOM05D005921 ORTHO05D007374 1.1e-170 604.0 470 62.1
TWI32G1095 Tripterygium wilfordii HOM05D005921 ORTHO05D007374 1.1e-170 604.0 468 63.0
AUR62034891 Chenopodium quinoa HOM05D005921 ORTHO05D007374 1.9e-170 603.2 476 63.9
Duzib116G0900 Durio zibethinus HOM05D005921 ORTHO05D007374 2.5e-170 602.8 467 62.5
Gohir.A05G270866 Gossypium hirsutum HOM05D005921 ORTHO05D007374 2.5e-170 602.8 487 60.8
Migut.N02950 Erythranthe guttata HOM05D005921 ORTHO05D007374 4.2e-170 602.1 471 62.0
CiPaw.15G012300 Carya illinoinensis HOM05D005921 ORTHO05D007374 1.2e-169 600.5 448 64.7
Ca_10662_v3 Cicer arietinum L. HOM05D005921 ORTHO05D007374 1.2e-169 600.5 527 56.7
Glyma.10G221400 Glycine max HOM05D005921 ORTHO05D007374 2.1e-169 599.7 501 58.5
FvH4_2g13020 Fragaria vesca HOM05D005921 ORTHO05D007374 6.1e-169 598.2 524 57.8
TPR.G17011 Trifolium pratense HOM05D005921 ORTHO05D007374 1.0e-168 597.4 524 57.1
Glyma.20G170200 Glycine max HOM05D005921 ORTHO05D007374 1.8e-168 596.7 488 59.4
Manes.02G183400 Manihot esculenta HOM05D005921 ORTHO05D007374 4.0e-168 595.5 487 61.4
CSS0006668 Camellia sinensis var. sinensis HOM05D005921 ORTHO05D007374 5.2e-168 595.1 486 60.5
Psat0s899g0040 Pisum sativum HOM05D005921 ORTHO05D007374 8.8e-168 594.3 493 59.4
Ciclev10003457m.g Citrus clementina HOM05D005921 ORTHO05D007374 1.1e-167 594.0 475 61.5
Cc10_g15280 Coffea canephora HOM05D005921 ORTHO05D007374 2.6e-167 592.8 535 56.8
CDE04G2034 Ceratophyllum demersum HOM05D005921 ORTHO05D007374 4.4e-167 592.0 497 57.7
COL.COLO4_13778 Corchorus olitorius HOM05D005921 ORTHO05D007374 1.3e-166 590.5 558 54.1
VMungo0720G0456 Vigna mungo HOM05D005921 ORTHO05D007374 1.3e-166 590.5 489 59.5
Eucgr.L02800 Eucalyptus grandis HOM05D005921 ORTHO05D007374 1.7e-166 590.1 589 53.7
PGR044G0568 Punica granatum HOM05D005921 ORTHO05D007374 2.2e-166 589.7 536 56.7
Sopen04g027990 Solanum pennellii HOM05D005921 ORTHO05D007374 1.8e-165 586.6 465 61.7
CANSAT25G0895 Cannabis sativa HOM05D005921 ORTHO05D007374 4.1e-165 585.5 527 55.8
Solyc04g072010.3 Solanum lycopersicum HOM05D005921 ORTHO05D007374 4.1e-165 585.5 465 61.5
CsaV3_6G004990 Cucumis sativus L. HOM05D005921 ORTHO05D007374 5.3e-165 585.1 522 56.1
ClCG08G007340 Citrullus lanatus HOM05D005921 ORTHO05D007374 1.2e-164 583.9 528 56.1
PSO675G2388 Papaver somniferum HOM05D005921 ORTHO05D007374 2.0e-164 583.2 487 57.7
CAN.G1252.3 Capsicum annuum HOM05D005921 ORTHO05D007374 4.5e-164 582.0 465 61.5
FAN27G2380 Fragaria x ananassa HOM05D005921 ORTHO05D007374 4.5e-164 582.0 545 55.2
HanXRQChr02g0042431 Helianthus annuus HOM05D005921 ORTHO05D007374 5.9e-164 581.6 517 55.9
Sp5g26720 Schrenkiella parvula HOM05D005921 ORTHO05D007374 5.9e-164 581.6 437 63.2
AL2G31250 Arabidopsis lyrata HOM05D005921 ORTHO05D007374 1.3e-163 580.5 496 56.9
AT1G71696 Arabidopsis thaliana HOM05D005921 ORTHO05D007374 1.3e-163 580.5 487 57.9
Aa31LG4G8950 Aethionema arabicum HOM05D005921 ORTHO05D007374 2.9e-163 579.3 496 56.5
Lsat_1_v5_gn_1_5181 Lactuca sativa HOM05D005921 ORTHO05D007374 2.1e-161 573.2 519 55.1
Carub.0002s1845 Capsella rubella HOM05D005921 ORTHO05D007374 3.6e-161 572.4 487 56.5
Aqoxy6G00427 Aquilegia oxysepala HOM05D005921 ORTHO05D007374 1.4e-160 570.5 529 53.3
BcaC03g15284 Brassica carinata HOM05D005921 ORTHO05D007374 1.4e-160 570.5 487 57.9
A02p17260 Brassica napus HOM05D005921 ORTHO05D007374 1.8e-160 570.1 437 62.2
MSTRG.22109 Avicennia marina HOM05D005921 ORTHO05D007374 8.8e-160 567.8 466 59.0
BcaB05g24658 Brassica carinata HOM05D005921 ORTHO05D007374 8.8e-160 567.8 487 57.1
Sed0007537 Sechium edule HOM05D005921 ORTHO05D007374 1.3e-158 563.9 446 61.2
Peaxi162Scf00360g00056 Petunia axillaris HOM05D005921 ORTHO05D007374 2.8e-158 562.8 484 58.3
C02p28900 Brassica napus HOM05D005921 ORTHO05D007374 1.4e-157 560.5 503 56.1
Thhalv10018610m.g Eutrema salsugineum HOM05D005921 ORTHO05D007374 1.0e-155 554.3 409 63.8
ECA247G3881 Erigeron canadensis HOM05D005921 ORTHO05D007374 2.2e-155 553.1 423 63.1
SalBow6G1744 Salvia bowleyana HOM05D005921 ORTHO05D007374 6.5e-155 551.6 485 57.1
FAN15G3525 Fragaria x ananassa HOM05D005921 ORTHO05D007374 8.5e-155 551.2 548 52.7
MSTRG.24492 Avicennia marina HOM05D005921 ORTHO05D007374 1.5e-154 550.4 474 58.4
unitig_578.g16229 Utricularia gibba HOM05D005921 ORTHO05D007374 1.2e-153 547.4 439 59.7
Lj4A704G63 Lonicera japonica HOM05D005921 ORTHO05D007374 1.4e-152 543.9 420 62.6
CARHR291100 Cardamine hirsuta HOM05D005921 ORTHO05D007374 1.8e-152 543.5 438 60.3
Phvul.007G083600 Phaseolus vulgaris HOM05D005921 ORTHO05D007374 3.0e-152 542.7 444 58.3
Gohir.D05G273101 Gossypium hirsutum HOM05D005921 ORTHO05D007374 1.8e-149 533.5 487 55.6
Nn5g28835 Nelumbo nucifera HOM05D005921 ORTHO05D007374 5.4e-149 531.9 523 52.4
Zm00001eb377250 Zea mays HOM05D005921 ORTHO05D007374 1.2e-148 530.8 426 60.1
AUR62026635 Chenopodium quinoa HOM05D005921 ORTHO05D007374 2.3e-147 526.6 437 61.3
ATR1120G060 Amborella trichopoda HOM05D004165 ORTHO05D005063 3.6e-145 519.2 447 56.2
MELO3C019977.2 Cucumis melo HOM05D005921 ORTHO05D007374 3.6e-145 519.2 429 58.7
Lj7A383T42 Lonicera japonica HOM05D005921 ORTHO05D007374 2.0e-143 513.5 488 54.7
FAN20G2564 Fragaria x ananassa HOM05D005921 ORTHO05D007374 2.0e-140 503.4 548 50.0
Hma1.2p1_0358F.1_g134830 Hydrangea macrophylla HOM05D005921 ORTHO05D007374 1.1e-133 481.1 378 62.2
DCAR_001188 Daucus carota HOM05D005921 ORTHO05D007374 7.0e-133 478.4 339 66.1
Sabra05G0149900 Salix brachista HOM05D005921 ORTHO05D007374 2.0e-132 476.9 515 50.7
SGA_v2.0_scaffold54G19682 Striga asiatica HOM05D005921 ORTHO05D007374 2.7e-132 476.5 493 50.7
Nitab4.5_0013157g0020 Nicotiana tabacum HOM05D005921 ORTHO05D007374 1.4e-128 464.2 394 58.6
SMO116G0063 Selaginella moellendorffii HOM05D005921 ORTHO05D007374 1.2e-124 451.1 391 56.8
Nitab4.5_0000099g0240 Nicotiana tabacum HOM05D005921 ORTHO05D007374 2.5e-122 443.4 545 47.0
Mapoly0096s0032 Marchantia polymorpha HOM05D005921 ORTHO05D007374 1.6e-121 440.7 453 49.4
Cpa.g.sc26.80 Carica papaya HOM05D005921 ORTHO05D007374 6.4e-118 428.7 329 62.0
Ciclev10003529m.g Citrus clementina HOM05D005921 ORTHO05D007374 8.4e-118 428.3 414 55.3
AagrBONN_evm.TU.Sc2ySwM_344.3190 Anthoceros agrestis HOM05D005921 ORTHO05D007374 1.1e-117 427.9 408 50.2
HPP92_000681 Vanilla planifolia HOM05D005921 ORTHO05D007374 1.4e-117 427.6 421 52.5
Pp3c16_14030 Physcomitrium patens HOM05D005921 ORTHO05D007374 3.3e-114 416.4 371 52.6
Haze_17806 Corylus avellana HOM05D005921 ORTHO05D007374 1.6e-108 397.5 288 65.6
HPP92_000638 Vanilla planifolia HOM05D005921 ORTHO05D007374 9.0e-88 328.6 329 51.4
Pp3c6_12100 Physcomitrium patens HOM05D005921 ORTHO05D007374 2.2e-86 323.9 416 41.6
QL02p037958 Quercus lobata HOM05D005921 ORTHO05D007374 4.9e-86 322.8 281 57.7
CBR_g30849 Chara braunii HOM05D005921 ORTHO05D007374 2.5e-85 320.5 389 41.6
QL02p037460 Quercus lobata HOM05D005921 ORTHO05D007374 2.5e-85 320.5 281 57.3
Oeu017621.1 Olea europaea HOM05D005921 ORTHO05D007374 1.6e-81 307.8 174 78.2
QL02p037446 Quercus lobata HOM05D005921 ORTHO05D007374 1.4e-80 304.7 245 58.8
QL02p037946 Quercus lobata HOM05D005921 ORTHO05D007374 1.4e-80 304.7 245 58.8
SHI09099 Sapria himalayana HOM05D005921 ORTHO05D007374 3.4e-79 300.1 218 63.8
BolC2t08937H Brassica oleracea HOM05D005921 ORTHO05D007374 7.6e-79 298.9 245 59.6
BraA02t06774Z Brassica rapa HOM05D005921 ORTHO05D007374 2.9e-78 297.0 245 59.2
MCO15G195 Micromonas commoda HOM05D005921 ORTHO05D007374 5.1e-75 286.2 418 38.0
PRCOL_00005633 Prasinoderma coloniale HOM05D005921 ORTHO05D007374 1.3e-62 245.0 368 37.8
BraA02t06773Z Brassica rapa HOM05D005921 ORTHO05D007374 2.8e-57 227.3 176 61.4
BolC2t08936H Brassica oleracea HOM05D005921 ORTHO05D007374 3.7e-57 226.9 233 51.1
Zm00001eb035610 Zea mays HOM05D005921 ORTHO05D007374 6.5e-54 216.1 191 57.6
Os06g0144600 Oryza sativa ssp. japonica HOM05D005921 ORTHO05D007374 4.2e-53 213.4 222 53.2
SEGI_33860 Sequoiadendron giganteum HOM05D005921 ORTHO05D007374 8.8e-51 205.7 278 42.8
Zm00001eb246880 Zea mays HOM05D005921 ORTHO05D007374 1.5e-37 161.8 145 57.2
SEGI_16149 Sequoiadendron giganteum HOM05D005921 ORTHO05D007374 4.2e-37 160.2 98 67.3
Cre07.g335900 Chlamydomonas reinhardtii HOM05D005921 ORTHO05D007374 1.6e-36 158.3 369 32.2
Cre06.g309450 Chlamydomonas reinhardtii HOM05D005921 ORTHO05D007374 1.4e-27 128.6 369 28.7
SHI09097 Sapria himalayana HOM05D005921 ORTHO05D007374 5.2e-27 126.7 113 54.9
Duzib093G1718 Durio zibethinus HOM05D005921 ORTHO05D007374 1.4e-24 118.6 112 51.8
Zm00001eb035620 Zea mays HOM05D005921 ORTHO05D007374 8.9e-19 99.4 55 76.4
MD10G1034600 Malus domestica HOM05D005921 ORTHO05D007374 5.4e-16 90.1 72 55.6
Pp3c27_7150 Physcomitrium patens HOM05D005921 ORTHO05D007374 5.6e-13 80.1 289 24.9
Sabra02G0051300 Salix brachista HOM05D005921 ORTHO05D007374 3.0e-06 57.8 31 77.4
CBR_g24397 Chara braunii HOM05D005921 ORTHO05D132278 6.6e-06 56.6 83 30.1


User provided reference genes

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