Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund26617 Selenicereus undatus HOM05D000561 ORTHO05D008162 2.6e-278 961.4 495 100.0
EL10Ac1g01805 Beta vulgaris HOM05D000561 ORTHO05D008162 2.4e-90 337.0 438 47.9
GSVIVG01009559001 Vitis vinifera HOM05D000561 ORTHO05D008162 1.5e-89 334.3 421 48.5
Dinv39338 Davidia involucrata HOM05D000561 ORTHO05D008162 5.9e-89 332.4 422 47.4
TAR625G0340 Trochodendron aralioides HOM05D000561 ORTHO05D008162 6.5e-88 328.9 421 47.3
Hma1.2p1_0260F.1_g104740 Hydrangea macrophylla HOM05D000561 ORTHO05D008162 2.5e-87 327.0 418 47.1
Atru.chr13.629 Acer truncatum HOM05D000561 ORTHO05D008162 4.2e-87 326.2 418 45.9
Atru.chr13.633 Acer truncatum HOM05D000561 ORTHO05D008162 4.2e-87 326.2 418 45.9
Duzib116G0222 Durio zibethinus HOM05D000561 ORTHO05D008162 5.5e-87 325.9 422 46.9
Actinidia22609 Actinidia chinensis HOM05D000561 ORTHO05D008162 7.2e-87 325.5 423 46.8
TAR628G0509 Trochodendron aralioides HOM05D000561 ORTHO05D008162 7.2e-87 325.5 419 46.8
QL02p005893 Quercus lobata HOM05D000561 ORTHO05D008162 4.7e-86 322.8 395 49.4
MD08G1106500 Malus domestica HOM05D000561 ORTHO05D008162 8.0e-86 322.0 412 46.6
MD15G1087100 Malus domestica HOM05D000561 ORTHO05D008162 1.8e-85 320.9 416 46.2
vmacro21557 Vaccinium macrocarpon HOM05D000561 ORTHO05D008162 2.6e-84 317.0 420 46.7
CSS0036187 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D008162 5.7e-84 315.8 378 48.4
Gohir.D05G203500 Gossypium hirsutum HOM05D000561 ORTHO05D008162 5.7e-84 315.8 424 46.0
Prupe.1G440800 Prunus persica HOM05D000561 ORTHO05D008162 2.8e-83 313.5 420 45.5
Potri.014G034700 Populus trichocarpa HOM05D000561 ORTHO05D008162 1.4e-82 311.2 406 45.1
Gohir.A05G200200 Gossypium hirsutum HOM05D000561 ORTHO05D008162 2.4e-82 310.5 424 45.0
CsaV3_2G028140 Cucumis sativus L. HOM05D000561 ORTHO05D008162 5.3e-82 309.3 420 45.5
Rhsim06G0046600 Rhododendron simsii HOM05D000561 ORTHO05D008162 5.3e-82 309.3 421 45.6
RcHm_v2.0_Chr6g0307161 Rosa chinensis HOM05D000561 ORTHO05D008162 5.3e-82 309.3 415 45.5
Ciclev10001965m.g Citrus clementina HOM05D000561 ORTHO05D008162 9.1e-82 308.5 416 45.7
Gorai.009G209500 Gossypium raimondii HOM05D000561 ORTHO05D008162 1.2e-81 308.1 425 45.4
CiPaw.16G047800 Carya illinoinensis HOM05D000561 ORTHO05D008162 2.0e-81 307.4 419 46.5
MELO3C010892.2 Cucumis melo HOM05D000561 ORTHO05D008162 2.0e-81 307.4 421 45.8
ClCG08G015630 Citrullus lanatus HOM05D000561 ORTHO05D008162 2.6e-81 307.0 418 45.2
Sed0001510 Sechium edule HOM05D000561 ORTHO05D008162 3.5e-81 306.6 415 45.1
MBI06_g08185_MAGBIO Magnolia biondii HOM05D000561 ORTHO05D008162 7.7e-81 305.4 452 43.4
Cc10_g03990 Coffea canephora HOM05D000561 ORTHO05D008162 1.3e-80 304.7 383 46.5
Nn5g30201 Nelumbo nucifera HOM05D000561 ORTHO05D000514 2.2e-80 303.9 381 46.5
Duzib093G1567 Durio zibethinus HOM05D000561 ORTHO05D008162 3.8e-80 303.1 418 44.7
CAN.G371.47 Capsicum annuum HOM05D000561 ORTHO05D008162 8.5e-80 302.0 429 44.3
Lalb_Chr08g0245641 Lupinus albus HOM05D000561 ORTHO05D008162 1.5e-79 301.2 424 46.2
Manes.05G170800 Manihot esculenta HOM05D000561 ORTHO05D008162 1.9e-79 300.8 419 44.6
TPR.G10521 Trifolium pratense HOM05D000561 ORTHO05D008162 1.9e-79 300.8 408 46.1
DCAR_019467 Daucus carota HOM05D000561 ORTHO05D008162 2.5e-79 300.4 420 43.8
CDE06G2652 Ceratophyllum demersum HOM05D000561 ORTHO05D008162 4.2e-79 299.7 413 45.0
Aqoxy6G01386 Aquilegia oxysepala HOM05D000561 ORTHO05D008162 1.2e-78 298.1 372 46.5
PSO541G5839 Papaver somniferum HOM05D000561 ORTHO05D008162 1.2e-78 298.1 387 45.5
PSO675G5921 Papaver somniferum HOM05D000561 ORTHO05D008162 1.2e-78 298.1 394 45.2
arahy.Tifrunner.gnm1.ann1.YYC1CT Arachis hypogaea HOM05D000561 ORTHO05D008162 1.6e-78 297.7 403 46.4
Phvul.009G063100 Phaseolus vulgaris HOM05D000561 ORTHO05D008162 2.1e-78 297.4 422 45.5
Haze_17567 Corylus avellana HOM05D000561 ORTHO05D008162 2.7e-78 297.0 407 46.4
TWI56G0230 Tripterygium wilfordii HOM05D000561 ORTHO05D008162 6.1e-78 295.8 407 45.2
Ah.06g192790 Amaranthus hybridus HOM05D000561 ORTHO05D008162 8.0e-78 295.4 425 45.4
Medtr3g101350 Medicago truncatula HOM05D000561 ORTHO05D008162 2.3e-77 293.9 384 46.4
CARHR050650 Cardamine hirsuta HOM05D000561 ORTHO05D008162 3.0e-77 293.5 419 44.4
Lj1g0015016 Lotus japonicus HOM05D000561 ORTHO05D008162 8.8e-77 292.0 375 45.9
FAN27G1876 Fragaria x ananassa HOM05D000561 ORTHO05D008162 1.5e-76 291.2 425 44.0
Glyma.06G037300 Glycine max HOM05D000561 ORTHO05D008162 2.0e-76 290.8 363 47.4
Psat5g044440 Pisum sativum HOM05D000561 ORTHO05D008162 2.0e-76 290.8 428 42.8
Nitab4.5_0000068g0440 Nicotiana tabacum HOM05D000561 ORTHO05D008162 3.3e-76 290.0 406 44.6
Sabra14G0024600 Salix brachista HOM05D000561 ORTHO05D008162 3.3e-76 290.0 404 44.6
Lsat_1_v5_gn_4_124200 Lactuca sativa HOM05D000561 ORTHO05D008162 9.7e-76 288.5 415 43.9
MSTRG.1332 Avicennia marina HOM05D000561 ORTHO05D008162 1.3e-75 288.1 425 42.4
Nitab4.5_0005549g0040 Nicotiana tabacum HOM05D000561 ORTHO05D008162 1.3e-75 288.1 369 46.1
AUR62022458 Chenopodium quinoa HOM05D000561 ORTHO05D008162 1.7e-75 287.7 420 45.7
THA.LOC104803685 Tarenaya hassleriana HOM05D000561 ORTHO05D008162 2.8e-75 287.0 372 45.4
Sp4g07760 Schrenkiella parvula HOM05D000561 ORTHO05D008162 3.7e-75 286.6 429 43.1
FvH4_2g34880 Fragaria vesca HOM05D000561 ORTHO05D008162 8.2e-75 285.4 388 45.9
HanXRQChr02g0038741 Helianthus annuus HOM05D000561 ORTHO05D008162 8.2e-75 285.4 398 43.0
Manes.18G034000 Manihot esculenta HOM05D000561 ORTHO05D008162 1.1e-74 285.0 396 44.2
Thecc.08G013400 Theobroma cacao HOM05D000561 ORTHO05D008162 1.4e-74 284.6 416 44.0
HanXRQChr09g0268001 Helianthus annuus HOM05D000561 ORTHO05D008162 9.1e-74 282.0 416 43.0
AL4G19400 Arabidopsis lyrata HOM05D000561 ORTHO05D008162 1.6e-73 281.2 413 45.0
Migut.C00604 Erythranthe guttata HOM05D000561 ORTHO05D008162 1.6e-73 281.2 425 41.2
Eucgr.F02370 Eucalyptus grandis HOM05D000561 ORTHO05D008162 1.6e-73 281.2 348 45.4
Lsat_1_v5_gn_1_20480 Lactuca sativa HOM05D000561 ORTHO05D008162 1.6e-73 281.2 415 42.9
Solyc04g079320.4 Solanum lycopersicum HOM05D000561 ORTHO05D008162 1.6e-73 281.2 379 43.5
Sopen04g032930 Solanum pennellii HOM05D000561 ORTHO05D008162 2.0e-73 280.8 384 43.2
Carub.0003s2738 Capsella rubella HOM05D000561 ORTHO05D008162 7.7e-73 278.9 412 43.7
Ca_15966_v3 Cicer arietinum L. HOM05D000561 ORTHO05D008162 1.3e-72 278.1 403 43.7
COL.COLO4_26457 Corchorus olitorius HOM05D000561 ORTHO05D008162 1.7e-72 277.7 348 45.4
Os03g0186100 Oryza sativa ssp. japonica HOM05D000561 ORTHO05D008162 8.5e-72 275.4 372 44.1
Sabra02G0100300 Salix brachista HOM05D000561 ORTHO05D008162 8.5e-72 275.4 384 44.5
AT2G26540 Arabidopsis thaliana HOM05D000561 ORTHO05D008162 1.9e-71 274.2 435 41.6
PGR031G3300 Punica granatum HOM05D000561 ORTHO05D008162 5.5e-71 272.7 358 45.0
Aa31LG10G9880 Aethionema arabicum HOM05D000561 ORTHO05D008162 7.2e-71 272.3 415 43.1
ECA232G0584 Erigeron canadensis HOM05D000561 ORTHO05D008162 3.6e-70 270.0 419 41.5
Zm00001eb006450 Zea mays HOM05D000561 ORTHO05D008162 6.1e-70 269.2 365 43.3
A09p55150 Brassica napus HOM05D000561 ORTHO05D008162 2.3e-69 267.3 376 43.6
BolC8t51383H Brassica oleracea HOM05D000561 ORTHO05D008162 4.0e-69 266.5 376 43.1
SGA_v2.0_scaffold71G24043 Striga asiatica HOM05D000561 ORTHO05D008162 8.8e-69 265.4 382 42.4
BraA09t40923Z Brassica rapa HOM05D000561 ORTHO05D008162 1.2e-68 265.0 376 43.1
HPP92_011186 Vanilla planifolia HOM05D000561 ORTHO05D008162 1.2e-68 265.0 387 41.6
C08p38080 Brassica napus HOM05D000561 ORTHO05D008162 1.5e-68 264.6 376 42.8
Peaxi162Scf00566g00219 Petunia axillaris HOM05D000561 ORTHO05D008162 4.4e-68 263.1 355 45.1
BcaB08g35302 Brassica carinata HOM05D000561 ORTHO05D008162 1.7e-67 261.2 400 41.2
Thhalv10001252m.g Eutrema salsugineum HOM05D000561 ORTHO05D008162 2.2e-67 260.8 452 41.4
ATR0087G004 Amborella trichopoda HOM05D000561 ORTHO05D008162 6.3e-67 259.2 352 44.9
SalBow7G2378 Salvia bowleyana HOM05D000561 ORTHO05D008162 1.8e-66 257.7 469 36.9
FAN20G2490 Fragaria x ananassa HOM05D000561 ORTHO05D008162 5.4e-66 256.1 438 43.2
BcaC07g40815 Brassica carinata HOM05D000561 ORTHO05D008162 9.1e-66 255.4 361 42.7
Migut.O00512 Erythranthe guttata HOM05D000561 ORTHO05D008162 2.3e-64 250.8 418 37.8
AUR62040067 Chenopodium quinoa HOM05D000561 ORTHO05D008162 5.0e-64 249.6 423 41.1
VMungo1309G1588 Vigna mungo HOM05D000561 ORTHO05D008162 6.3e-59 232.6 352 40.6
Glyma.04G037000 Glycine max HOM05D000561 ORTHO05D008162 1.8e-58 231.1 331 44.4
Pp3c9_18350 Physcomitrium patens HOM05D000561 ORTHO05D008162 1.8e-58 231.1 371 36.4
Lj4A51T47 Lonicera japonica HOM05D000561 ORTHO05D008162 7.0e-58 229.2 310 44.5
Sc26g0003980 Simmondsia chinensis HOM05D000561 ORTHO05D008162 9.2e-58 228.8 187 66.8
Cpa.g.sc64.2 Carica papaya HOM05D000561 ORTHO05D008162 2.3e-56 224.2 307 42.3
AagrBONN_evm.TU.Sc2ySwM_228.1283 Anthoceros agrestis HOM05D000561 ORTHO05D008162 7.3e-55 219.2 364 37.6
Mapoly0101s0072 Marchantia polymorpha HOM05D000561 ORTHO05D008162 3.4e-52 210.3 413 34.6
SEGI_40608 Sequoiadendron giganteum HOM05D000561 ORTHO05D008162 2.9e-51 207.2 355 35.2
ECA247G1201 Erigeron canadensis HOM05D000561 ORTHO05D000514 4.3e-47 193.4 319 37.6
SHI08313 Sapria himalayana HOM05D000561 ORTHO05D008162 7.3e-47 192.6 368 36.1
SMO367G0032 Selaginella moellendorffii HOM05D000561 ORTHO05D008162 7.3e-47 192.6 388 33.0
CDE10G0258 Ceratophyllum demersum HOM05D000561 ORTHO05D008162 8.9e-45 185.7 141 63.8
Carub.0004s0671 Capsella rubella HOM05D000561 ORTHO05D008162 7.5e-44 182.6 374 36.6
Migut.N02692 Erythranthe guttata HOM05D000561 ORTHO05D008162 1.9e-42 177.9 151 60.3
CBR_g12178 Chara braunii HOM05D000561 ORTHO05D008162 3.7e-35 153.7 375 31.7
SGA_v2.0_scaffold217G42442 Striga asiatica HOM05D000561 ORTHO05D008162 1.4e-34 151.8 119 63.0
MCO15G161 Micromonas commoda HOM05D000561 ORTHO05D008162 3.2e-34 150.6 393 31.0
Cre09.g409100 Chlamydomonas reinhardtii HOM05D000561 ORTHO05D008162 1.2e-33 148.7 398 29.9
arahy.Tifrunner.gnm1.ann1.96H4RR Arachis hypogaea HOM05D000561 ORTHO05D008162 1.6e-33 148.3 262 39.7
unitig_32.g11128 Utricularia gibba HOM05D000561 ORTHO05D008162 6.6e-32 142.9 112 61.6
PRCOL_00005348 Prasinoderma coloniale HOM05D000561 ORTHO05D008162 1.5e-28 131.7 368 29.6
Lsat_1_v5_gn_2_45600 Lactuca sativa HOM05D000561 ORTHO05D008162 2.0e-28 131.3 116 55.2
Lsat_1_v5_gn_5_145360 Lactuca sativa HOM05D000561 ORTHO05D008162 3.9e-24 117.1 90 61.1
SGA_v2.0_scaffold217G42441 Striga asiatica HOM05D000561 ORTHO05D008162 2.1e-22 111.3 77 64.9
Lsat_1_v5_gn_5_39421 Lactuca sativa HOM05D000487 ORTHO05D048384 1.4e-18 98.6 82 53.7


User provided reference genes

Program Settings