Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund26496 Selenicereus undatus HOM05D006513 ORTHO05D008150 5.4e-86 320.9 150 100.0
Ah.09g225970 Amaranthus hybridus HOM05D006513 ORTHO05D008150 1.7e-55 219.5 130 76.2
AUR62011112 Chenopodium quinoa HOM05D000667 ORTHO05D002614 2.2e-55 219.2 135 74.8
EL10Ac8g18628 Beta vulgaris HOM05D006513 ORTHO05D008150 3.8e-55 218.4 130 75.4
AUR62033489 Chenopodium quinoa HOM05D006513 ORTHO05D008150 4.1e-54 214.9 135 73.3
Sc08g0006720 Simmondsia chinensis HOM05D006513 ORTHO05D008150 7.3e-51 204.1 133 68.4
Manes.14G131100 Manihot esculenta HOM05D006513 ORTHO05D008150 1.2e-45 186.8 133 63.2
Ciclev10009612m.g Citrus clementina HOM05D006513 ORTHO05D008150 1.6e-45 186.4 143 62.2
Eucgr.C04187 Eucalyptus grandis HOM05D006513 ORTHO05D008150 1.6e-45 186.4 139 61.2
Manes.06G049600 Manihot esculenta HOM05D006513 ORTHO05D008150 3.5e-45 185.3 133 62.4
Thecc.09G123900 Theobroma cacao HOM05D006513 ORTHO05D008150 4.6e-45 184.9 133 62.4
CiPaw.03G242700 Carya illinoinensis HOM05D006513 ORTHO05D008150 7.8e-45 184.1 138 60.9
Cc06_g08720 Coffea canephora HOM05D006513 ORTHO05D008150 7.8e-45 184.1 131 60.3
Gohir.A07G035100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 2.3e-44 182.6 133 60.2
Hma1.2p1_0665F.1_g199090 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 1.1e-43 180.3 138 61.6
Gohir.A08G239200 Gossypium hirsutum HOM05D006513 ORTHO05D008150 1.5e-43 179.9 133 61.7
PGR102G1904 Punica granatum HOM05D006513 ORTHO05D008150 1.5e-43 179.9 139 61.9
TWI34G1228 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 1.5e-43 179.9 133 60.9
Gohir.D07G039100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 1.9e-43 179.5 133 58.6
Haze_25608 Corylus avellana HOM05D006513 ORTHO05D008150 2.5e-43 179.1 133 59.4
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 2.5e-43 179.1 131 61.8
Gorai.001G041200 Gossypium raimondii HOM05D006513 ORTHO05D008150 3.3e-43 178.7 133 58.6
TAR626G1980 Trochodendron aralioides HOM05D006513 ORTHO05D008150 1.3e-42 176.8 133 63.2
Duzib168G2120 Durio zibethinus HOM05D006513 ORTHO05D008150 1.6e-42 176.4 133 59.4
Actinidia26398 Actinidia chinensis HOM05D006513 ORTHO05D008150 4.8e-42 174.9 133 60.2
Lsat_1_v5_gn_7_45681 Lactuca sativa HOM05D006513 ORTHO05D008150 6.2e-42 174.5 131 60.3
Duzib187G1241 Durio zibethinus HOM05D006513 ORTHO05D008150 8.1e-42 174.1 133 57.9
GSVIVG01015511001 Vitis vinifera HOM05D006513 ORTHO05D008150 1.1e-41 173.7 133 60.2
TAR625G1184 Trochodendron aralioides HOM05D006513 ORTHO05D008150 1.4e-41 173.3 129 64.3
Oeu021588.1 Olea europaea HOM05D006513 ORTHO05D008150 2.4e-41 172.6 131 61.1
HanXRQChr09g0242331 Helianthus annuus HOM05D006513 ORTHO05D008150 3.1e-41 172.2 132 59.8
Duzib150G1190 Durio zibethinus HOM05D006513 ORTHO05D008150 4.0e-41 171.8 135 57.8
Lj7A631T29 Lonicera japonica HOM05D006513 ORTHO05D008150 9.0e-41 170.6 134 60.4
TWI63G1281 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 2.0e-40 169.5 139 57.6
CSS0037158 Camellia sinensis var. sinensis HOM05D006513 ORTHO05D008150 4.5e-40 168.3 133 60.2
MD02G1034700 Malus domestica HOM05D006513 ORTHO05D008150 4.5e-40 168.3 133 58.6
ECA240G2511 Erigeron canadensis HOM05D006513 ORTHO05D008150 5.8e-40 167.9 138 57.2
Nn2g12003 Nelumbo nucifera HOM05D006513 ORTHO05D008150 5.8e-40 167.9 133 59.4
Gorai.004G277700 Gossypium raimondii HOM05D006513 ORTHO05D008150 7.6e-40 167.5 167 50.3
MELO3C010361.2 Cucumis melo HOM05D006513 ORTHO05D008150 9.9e-40 167.2 133 54.9
Potri.018G066700 Populus trichocarpa HOM05D006513 ORTHO05D008150 1.3e-39 166.8 134 58.2
Carub.0006s1850 Capsella rubella HOM05D006513 ORTHO05D008150 2.2e-39 166.0 134 57.5
Prupe.7G240600 Prunus persica HOM05D006513 ORTHO05D008150 2.2e-39 166.0 133 57.9
PSO170G2269 Papaver somniferum HOM05D006513 ORTHO05D008150 2.9e-39 165.6 135 58.5
Sabra18G0060100 Salix brachista HOM05D006513 ORTHO05D008150 3.8e-39 165.2 142 55.6
PSO455G0031 Papaver somniferum HOM05D006513 ORTHO05D008150 4.9e-39 164.9 135 58.5
HanXRQChr03g0062541 Helianthus annuus HOM05D006513 ORTHO05D008150 8.4e-39 164.1 131 57.3
MD15G1175500 Malus domestica HOM05D006513 ORTHO05D008150 8.4e-39 164.1 133 57.1
AL6G31670 Arabidopsis lyrata HOM05D006513 ORTHO05D008150 1.9e-38 162.9 134 56.0
BcaB05g22870 Brassica carinata HOM05D006513 ORTHO05D008150 2.4e-38 162.5 134 56.7
CARHR192710 Cardamine hirsuta HOM05D006513 ORTHO05D008150 2.4e-38 162.5 134 56.7
THA.LOC104799645 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 5.4e-38 161.4 134 57.5
Aqoxy7G02130 Aquilegia oxysepala HOM05D006513 ORTHO05D008150 7.1e-38 161.0 134 58.2
AT5G20120 Arabidopsis thaliana HOM05D006513 ORTHO05D008150 1.2e-37 160.2 143 53.1
BcaC03g13734 Brassica carinata HOM05D006513 ORTHO05D008150 1.2e-37 160.2 134 54.5
BolC2t07016H Brassica oleracea HOM05D006513 ORTHO05D008150 1.2e-37 160.2 134 54.5
Sp6g24280 Schrenkiella parvula HOM05D006513 ORTHO05D008150 1.2e-37 160.2 134 54.5
PGSC0003DMG401020668 Solanum tuberosum HOM05D006513 ORTHO05D008150 1.2e-37 160.2 132 56.8
vmacro06122 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 1.2e-37 160.2 134 55.2
vmacro06182 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 1.2e-37 160.2 134 55.2
A02p06050 Brassica napus HOM05D006513 ORTHO05D008150 1.6e-37 159.8 134 55.2
BraA02t05556Z Brassica rapa HOM05D006513 ORTHO05D008150 1.6e-37 159.8 134 55.2
Nitab4.5_0002556g0080 Nicotiana tabacum HOM05D006513 ORTHO05D008150 2.1e-37 159.5 134 58.2
Peaxi162Scf00984g00021 Petunia axillaris HOM05D006513 ORTHO05D008150 2.1e-37 159.5 131 57.3
ClCG06G010970 Citrullus lanatus HOM05D006513 ORTHO05D008150 2.7e-37 159.1 167 45.5
Nitab4.5_0007523g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 3.5e-37 158.7 134 57.5
Sed0011750 Sechium edule HOM05D006513 ORTHO05D008150 4.6e-37 158.3 133 52.6
CANSAT11G2038 Cannabis sativa HOM05D006513 ORTHO05D008150 7.9e-37 157.5 133 55.6
Aa31LG1G14240 Aethionema arabicum HOM05D006513 ORTHO05D008150 1.0e-36 157.1 132 52.3
Thhalv10014769m.g Eutrema salsugineum HOM05D006513 ORTHO05D008150 1.8e-36 156.4 134 54.5
Lj4g0014130 Lotus japonicus HOM05D006513 ORTHO05D008150 3.0e-36 155.6 136 52.9
RcHm_v2.0_Chr2g0089051 Rosa chinensis HOM05D006513 ORTHO05D008150 5.1e-36 154.8 133 57.1
Sopen12g002610 Solanum pennellii HOM05D006513 ORTHO05D008150 6.7e-36 154.5 132 54.5
Solyc12g006660.2 Solanum lycopersicum HOM05D006513 ORTHO05D008150 8.7e-36 154.1 132 54.5
TPR.G10698 Trifolium pratense HOM05D006513 ORTHO05D008150 1.9e-35 152.9 136 53.7
Psat4g039440 Pisum sativum HOM05D006513 ORTHO05D008150 2.5e-35 152.5 139 53.2
Rhsim03G0247400 Rhododendron simsii HOM05D006513 ORTHO05D008150 3.3e-35 152.1 136 52.2
arahy.Tifrunner.gnm1.ann1.7JIW3E Arachis hypogaea HOM05D006513 ORTHO05D008150 5.6e-35 151.4 122 59.0
CAN.G377.11 Capsicum annuum HOM05D006513 ORTHO05D008150 9.6e-35 150.6 132 54.5
THA.LOC104811035 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 1.6e-34 149.8 133 54.1
Glyma.17G115800 Glycine max HOM05D006513 ORTHO05D008150 2.1e-34 149.4 136 53.7
BNapus_Darmor_BZH_scaffold_38p01790 Brassica napus HOM05D006513 ORTHO05D008150 2.8e-34 149.1 140 52.1
Nn8g39411 Nelumbo nucifera HOM05D006513 ORTHO05D008150 8.1e-34 147.5 131 52.7
Sed0002363 Sechium edule HOM05D006513 ORTHO05D008150 8.1e-34 147.5 134 52.2
Actinidia07430 Actinidia chinensis HOM05D006513 ORTHO05D008150 1.4e-33 146.7 135 53.3
Glyma.13G168100 Glycine max HOM05D006513 ORTHO05D008150 1.4e-33 146.7 136 52.9
Phvul.003G163500 Phaseolus vulgaris HOM05D006513 ORTHO05D008150 6.9e-33 144.4 136 52.9
QL02p087926 Quercus lobata HOM05D006513 ORTHO05D008150 1.2e-32 143.7 196 38.8
Lalb_Chr13g0301941 Lupinus albus HOM05D006513 ORTHO05D008150 4.5e-32 141.7 141 52.5
FvH4_1g03550 Fragaria vesca HOM05D006513 ORTHO05D008150 7.6e-32 141.0 133 51.1
FAN19G1517 Fragaria x ananassa HOM05D006513 ORTHO05D008150 7.6e-32 141.0 133 51.1
FAN26G1752 Fragaria x ananassa HOM05D006513 ORTHO05D008150 7.6e-32 141.0 133 51.1
Hma1.2p1_3730F.1_g337400 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 7.6e-32 141.0 141 50.4
FAN28G2022 Fragaria x ananassa HOM05D006513 ORTHO05D008150 2.2e-31 139.4 133 50.4
Lalb_Chr12g0197841 Lupinus albus HOM05D006513 ORTHO05D008150 2.2e-31 139.4 141 51.1
Medtr4g114105 Medicago truncatula HOM05D006513 ORTHO05D008150 2.9e-31 139.0 124 51.6
COL.COLO4_05780 Corchorus olitorius HOM05D006513 ORTHO05D008150 1.9e-30 136.3 86 67.4
MBI01_g37808_MAGBIO Magnolia biondii HOM05D006513 ORTHO05D008150 1.8e-28 129.8 129 52.7
CsaV3_1G029880 Cucumis sativus L. HOM05D006513 ORTHO05D008150 9.0e-25 117.5 91 51.6
Nitab4.5_0010819g0020 Nicotiana tabacum HOM05D005868 ORTHO05D006964 1.5e-24 116.7 89 61.8
arahy.Tifrunner.gnm1.ann1.PME717 Arachis hypogaea HOM05D006513 ORTHO05D008150 2.0e-24 116.3 88 63.6
VMungo1215G0117 Vigna mungo HOM05D006513 ORTHO05D008150 1.9e-22 109.8 105 54.3
HPP92_002794 Vanilla planifolia HOM05D006513 ORTHO05D008150 7.1e-22 107.8 136 42.6
Ca_21690_v3 Cicer arietinum L. HOM05D006513 ORTHO05D008150 7.9e-21 104.4 97 50.5
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 1.1e-19 100.5 86 59.3
TAR090G0005 Trochodendron aralioides HOM05D006513 ORTHO05D008150 1.3e-18 97.1 65 67.7
SEGI_29438 Sequoiadendron giganteum HOM05D006513 ORTHO05D008150 2.6e-16 89.4 130 42.3
Rhsim02G0222800 Rhododendron simsii HOM05D006513 ORTHO05D008150 2.2e-15 86.3 75 52.0
ATR1156G011 Amborella trichopoda HOM05D006513 ORTHO05D008150 3.2e-14 82.4 121 36.4
Mapoly0015s0101 Marchantia polymorpha HOM05D006513 ORTHO05D008150 3.3e-11 72.4 118 32.2
Pp3c5_25700 Physcomitrium patens HOM05D006513 ORTHO05D008150 4.3e-11 72.0 118 34.7
Pp3c25_13070 Physcomitrium patens HOM05D006513 ORTHO05D008150 5.7e-11 71.6 118 35.6
AagrBONN_evm.TU.Sc2ySwM_340.153 Anthoceros agrestis HOM05D006513 ORTHO05D008150 6.3e-10 68.2 124 30.6
vmacro22116 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 1.9e-06 56.6 55 49.1
Cpa.g.sc75.50 Carica papaya HOM05D006513 ORTHO05D008150 7.2e-06 54.7 50 54.0
Gohir.D08G259900 Gossypium hirsutum HOM05D006513 ORTHO05D008150 9.4e-06 54.3 48 47.9


User provided reference genes

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