Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund26491 Selenicereus undatus HOM05D000536 ORTHO05D001213 2.1e-103 379.4 242 100.0
EL10Ac8g18621 Beta vulgaris HOM05D000536 ORTHO05D001213 3.8e-41 172.6 255 54.1
AUR62033482 Chenopodium quinoa HOM05D000536 ORTHO05D001213 6.7e-30 135.2 123 65.9
CAN.G377.8 Capsicum annuum HOM05D000536 ORTHO05D001213 3.5e-18 96.3 136 45.6
Lalb_Chr12g0197831 Lupinus albus HOM05D000536 ORTHO05D001213 6.5e-17 92.0 139 41.0
Gohir.A05G017500 Gossypium hirsutum HOM05D000536 ORTHO05D001213 1.5e-16 90.9 127 42.5
Gohir.D05G018400 Gossypium hirsutum HOM05D000536 ORTHO05D001213 4.2e-16 89.4 127 41.7
Gorai.009G018800 Gossypium raimondii HOM05D000536 ORTHO05D001213 4.2e-16 89.4 135 42.2
Solyc12g006630.2 Solanum lycopersicum HOM05D000536 ORTHO05D001213 5.5e-16 89.0 101 53.5
Sopen12g002580 Solanum pennellii HOM05D000536 ORTHO05D001213 5.5e-16 89.0 101 53.5
TPR.G10718 Trifolium pratense HOM05D000536 ORTHO05D001213 7.2e-16 88.6 95 54.7
Glyma.13G168300 Glycine max HOM05D000536 ORTHO05D001213 1.2e-15 87.8 138 43.5
MD02G1034900 Malus domestica HOM05D000536 ORTHO05D001213 1.6e-15 87.4 92 52.2
Sed0016505 Sechium edule HOM05D000536 ORTHO05D001213 1.6e-15 87.4 124 42.7
CiPaw.03G242400 Carya illinoinensis HOM05D000536 ORTHO05D001213 2.1e-15 87.0 100 52.0
Cc06_g08740 Coffea canephora HOM05D000536 ORTHO05D001213 2.1e-15 87.0 139 43.9
Duzib168G1357 Durio zibethinus HOM05D000536 ORTHO05D001213 2.1e-15 87.0 87 52.9
Thecc.09G123600 Theobroma cacao HOM05D000536 ORTHO05D001213 2.1e-15 87.0 87 52.9
Hma1.2p1_0018F.1_g012620 Hydrangea macrophylla HOM05D000536 ORTHO05D001213 2.7e-15 86.7 88 53.4
Prupe.7G240100 Prunus persica HOM05D000536 ORTHO05D001213 2.7e-15 86.7 99 50.5
Cfa003351 Carpinus fangiana HOM05D000536 ORTHO05D001213 3.6e-15 86.3 108 50.0
FAN26G0898 Fragaria x ananassa HOM05D000536 ORTHO05D001213 3.6e-15 86.3 101 50.5
FAN28G0052 Fragaria x ananassa HOM05D000536 ORTHO05D001213 3.6e-15 86.3 101 50.5
FvH4_1g03560 Fragaria vesca HOM05D000536 ORTHO05D001213 4.7e-15 85.9 101 50.5
FAN19G2088 Fragaria x ananassa HOM05D000536 ORTHO05D001213 4.7e-15 85.9 101 50.5
Lalb_Chr07g0178841 Lupinus albus HOM05D000536 ORTHO05D001213 4.7e-15 85.9 141 38.3
RcHm_v2.0_Chr2g0089081 Rosa chinensis HOM05D000536 ORTHO05D001213 4.7e-15 85.9 92 52.2
PGSC0003DMG400020679 Solanum tuberosum HOM05D000536 ORTHO05D001213 4.7e-15 85.9 101 50.5
vmacro20599 Vaccinium macrocarpon HOM05D000536 ORTHO05D001213 4.7e-15 85.9 95 54.7
Dinv36543 Davidia involucrata HOM05D000536 ORTHO05D001213 6.1e-15 85.5 131 41.2
PGR102G3259 Punica granatum HOM05D000536 ORTHO05D001213 6.1e-15 85.5 136 40.4
Rhsim01G0076200 Rhododendron simsii HOM05D000536 ORTHO05D001213 6.1e-15 85.5 116 45.7
Rhsim01G0076300 Rhododendron simsii HOM05D000536 ORTHO05D001213 6.1e-15 85.5 116 45.7
FAN23G0966 Fragaria x ananassa HOM05D000536 ORTHO05D001213 8.0e-15 85.1 101 49.5
Psat4g040840 Pisum sativum HOM05D000536 ORTHO05D001213 8.0e-15 85.1 94 52.1
Duzib150G1540 Durio zibethinus HOM05D000536 ORTHO05D001213 1.0e-14 84.7 87 50.6
Eucgr.C04183 Eucalyptus grandis HOM05D000536 ORTHO05D001213 1.0e-14 84.7 86 52.3
CANSAT11G2354 Cannabis sativa HOM05D000536 ORTHO05D001213 1.4e-14 84.3 92 48.9
Ciclev10009401m.g Citrus clementina HOM05D000536 ORTHO05D001213 1.4e-14 84.3 65 63.1
HanXRQChr06g0180261 Helianthus annuus HOM05D000536 ORTHO05D001213 1.4e-14 84.3 99 48.5
TAR625G1232 Trochodendron aralioides HOM05D000536 ORTHO05D001213 1.4e-14 84.3 112 44.6
TAR626G0923 Trochodendron aralioides HOM05D000536 ORTHO05D001213 1.4e-14 84.3 113 46.0
GSVIVG01015506001 Vitis vinifera HOM05D000536 ORTHO05D001213 1.4e-14 84.3 72 62.5
Hma1.2p1_0665F.1_g199100 Hydrangea macrophylla HOM05D000536 ORTHO05D001213 1.8e-14 84.0 52 76.9
TAR383G0639 Trochodendron aralioides HOM05D000536 ORTHO05D001213 1.8e-14 84.0 88 52.3
Lj7A631G23 Lonicera japonica HOM05D000536 ORTHO05D001213 2.3e-14 83.6 77 57.1
Nitab4.5_0003558g0010 Nicotiana tabacum HOM05D000536 ORTHO05D001213 3.0e-14 83.2 70 61.4
Sc18g0000670 Simmondsia chinensis HOM05D000536 ORTHO05D001213 3.0e-14 83.2 144 42.4
AUR62011093 Chenopodium quinoa HOM05D000536 ORTHO05D001213 4.0e-14 82.8 48 85.4
COL.COLO4_05775 Corchorus olitorius HOM05D000536 ORTHO05D001213 4.0e-14 82.8 89 49.4
MD00G1106900 Malus domestica HOM05D000536 ORTHO05D001213 4.0e-14 82.8 88 52.3
QL02p087871 Quercus lobata HOM05D000536 ORTHO05D001213 4.0e-14 82.8 111 45.0
CSS0018342 Camellia sinensis var. sinensis HOM05D000536 ORTHO05D001213 5.2e-14 82.4 52 73.1
CSS0043910 Camellia sinensis var. sinensis HOM05D000536 ORTHO05D001213 5.2e-14 82.4 52 73.1
Nitab4.5_0007260g0010 Nicotiana tabacum HOM05D000536 ORTHO05D001213 5.2e-14 82.4 51 74.5
AT5G20110 Arabidopsis thaliana HOM05D000536 ORTHO05D001213 6.8e-14 82.0 90 50.0
MELO3C004518.2 Cucumis melo HOM05D000536 ORTHO05D001213 6.8e-14 82.0 137 41.6
CsaV3_2G002750 Cucumis sativus L. HOM05D000536 ORTHO05D001213 8.8e-14 81.6 139 41.0
AL6G31660 Arabidopsis lyrata HOM05D000536 ORTHO05D001213 1.2e-13 81.3 90 48.9
A03p09830 Brassica napus HOM05D000536 ORTHO05D001213 1.2e-13 81.3 99 45.5
SalBow1G6056 Salvia bowleyana HOM05D000536 ORTHO05D001213 1.2e-13 81.3 68 58.8
CSS0008171 Camellia sinensis var. sinensis HOM05D000536 ORTHO05D001213 2.0e-13 80.5 97 48.5
Glyma.17G116000 Glycine max HOM05D000536 ORTHO05D001213 2.0e-13 80.5 140 42.9
TWI34G0627 Tripterygium wilfordii HOM05D000536 ORTHO05D001213 2.0e-13 80.5 99 47.5
Atru.chr7.1210 Acer truncatum HOM05D000536 ORTHO05D001213 2.6e-13 80.1 117 43.6
Aqoxy7G02114 Aquilegia oxysepala HOM05D000536 ORTHO05D001213 2.6e-13 80.1 102 45.1
Cpa.g.sc75.54 Carica papaya HOM05D000536 ORTHO05D001213 2.6e-13 80.1 103 46.6
Peaxi162Scf00984g00117 Petunia axillaris HOM05D000536 ORTHO05D001213 2.6e-13 80.1 239 31.4
Thhalv10014655m.g Eutrema salsugineum HOM05D000536 ORTHO05D001213 3.4e-13 79.7 90 48.9
Manes.14G130800 Manihot esculenta HOM05D000536 ORTHO05D001213 3.4e-13 79.7 99 49.5
ClCG11G002920 Citrullus lanatus HOM05D000536 ORTHO05D001213 4.4e-13 79.3 152 38.8
Sp6g24300 Schrenkiella parvula HOM05D000536 ORTHO05D001213 4.4e-13 79.3 90 47.8
Aa31sc461G10 Aethionema arabicum HOM05D000536 ORTHO05D001213 5.7e-13 79.0 99 46.5
BNapus_Darmor_BZH_scaffold_38p01800 Brassica napus HOM05D000536 ORTHO05D001213 5.7e-13 79.0 90 47.8
BraA02t05555Z Brassica rapa HOM05D000536 ORTHO05D001213 5.7e-13 79.0 90 47.8
BraA03t10298Z Brassica rapa HOM05D000536 ORTHO05D001213 5.7e-13 79.0 90 47.8
arahy.Tifrunner.gnm1.ann1.VNPM5I Arachis hypogaea HOM05D000536 ORTHO05D001213 7.5e-13 78.6 107 44.9
CARHR192720 Cardamine hirsuta HOM05D000536 ORTHO05D001213 7.5e-13 78.6 89 48.3
MBI04_g07633_MAGBIO Magnolia biondii HOM05D000536 ORTHO05D001213 7.5e-13 78.6 87 50.6
Nn2g11972 Nelumbo nucifera HOM05D000536 ORTHO05D001213 1.3e-12 77.8 86 48.8
BcaB01g04803 Brassica carinata HOM05D000536 ORTHO05D001213 1.7e-12 77.4 89 47.2
BcaC03g13731 Brassica carinata HOM05D003058 ORTHO05D003464 1.7e-12 77.4 91 47.3
C03p11410 Brassica napus HOM05D000536 ORTHO05D001213 1.7e-12 77.4 89 47.2
BolC2t07014H Brassica oleracea HOM05D000536 ORTHO05D001213 1.7e-12 77.4 89 47.2
BolC3t13615H Brassica oleracea HOM05D000536 ORTHO05D001213 1.7e-12 77.4 89 47.2
Migut.K00474 Erythranthe guttata HOM05D000536 ORTHO05D001213 1.7e-12 77.4 93 52.7
THA.LOC104815103 Tarenaya hassleriana HOM05D000536 ORTHO05D001213 1.7e-12 77.4 92 45.7
Carub.0006s1849 Capsella rubella HOM05D000536 ORTHO05D001213 2.2e-12 77.0 87 48.3
Sed0020428 Sechium edule HOM05D000536 ORTHO05D001213 4.9e-12 75.9 120 39.2
Lsat_1_v5_gn_8_58960 Lactuca sativa HOM05D000536 ORTHO05D001213 1.1e-11 74.7 97 45.4
Nn8g39397 Nelumbo nucifera HOM05D000536 ORTHO05D001213 1.1e-11 74.7 119 41.2
Oeu034111.1 Olea europaea HOM05D000536 ORTHO05D001213 1.4e-11 74.3 51 68.6
ECA240G2050 Erigeron canadensis HOM05D000536 ORTHO05D001213 2.4e-11 73.6 89 51.7
arahy.Tifrunner.gnm1.ann1.62CDNH Arachis hypogaea HOM05D000536 ORTHO05D001213 3.1e-11 73.2 95 47.4
Medtr4g114060 Medicago truncatula HOM05D000536 ORTHO05D001213 4.1e-11 72.8 50 66.0
Lsat_1_v5_gn_7_45721 Lactuca sativa HOM05D000536 ORTHO05D001213 1.2e-10 71.2 51 66.7
Lj4g0020082 Lotus japonicus HOM05D000536 ORTHO05D001213 1.2e-10 71.2 48 68.8
ATR1156G077 Amborella trichopoda HOM05D000536 ORTHO05D001213 2.7e-10 70.1 100 41.0
A02p06040 Brassica napus HOM05D000536 ORTHO05D001213 4.5e-10 69.3 44 70.5
Haze_25610 Corylus avellana HOM05D000536 ORTHO05D001213 5.9e-10 68.9 101 45.5
DCAR_017824 Daucus carota HOM05D000536 ORTHO05D001213 5.9e-10 68.9 53 62.3
DCAR_017825 Daucus carota HOM05D000536 ORTHO05D001213 5.9e-10 68.9 53 62.3
PSO170G1145 Papaver somniferum HOM05D000536 ORTHO05D001213 1.3e-09 67.8 45 62.2
PSO455G0146 Papaver somniferum HOM05D000536 ORTHO05D001213 1.3e-09 67.8 45 62.2
SGA_v2.0_scaffold56G20077 Striga asiatica HOM05D000536 ORTHO05D001213 8.6e-09 65.1 68 54.4
Ciclev10021550m.g Citrus clementina HOM05D000536 ORTHO05D001213 1.1e-08 64.7 86 41.9
COL.COLO4_21257 Corchorus olitorius HOM05D000536 ORTHO05D001213 1.5e-08 64.3 89 46.1
HanXRQChr09g0242341 Helianthus annuus HOM05D000536 ORTHO05D001213 4.3e-08 62.8 51 56.9
Duzib084G0493 Durio zibethinus HOM05D000536 ORTHO05D001213 7.3e-08 62.0 97 38.1
CAN.G628.56 Capsicum annuum HOM05D000536 ORTHO05D001213 9.5e-08 61.6 41 70.7
PGR083G1234 Punica granatum HOM05D000536 ORTHO05D001213 9.5e-08 61.6 41 73.2
PGR083G1936 Punica granatum HOM05D000536 ORTHO05D001213 9.5e-08 61.6 41 73.2
Atru.chr9.2361 Acer truncatum HOM05D000536 ORTHO05D001213 1.2e-07 61.2 115 34.8
CSS0038761 Camellia sinensis var. sinensis HOM05D000536 ORTHO05D001213 1.2e-07 61.2 41 70.7
Zm00001eb342300 Zea mays HOM05D000536 ORTHO05D001213 1.2e-07 61.2 79 40.5
Dinv19896 Davidia involucrata HOM05D000536 ORTHO05D001213 1.6e-07 60.8 55 56.4
MSTRG.11412 Avicennia marina HOM05D000536 ORTHO05D001213 2.1e-07 60.5 91 44.0
BcaB01g04806 Brassica carinata HOM05D000536 ORTHO05D001213 2.1e-07 60.5 34 79.4
Duzib205G1168 Durio zibethinus HOM05D000536 ORTHO05D001213 2.1e-07 60.5 97 38.1
SalBow5G0983 Salvia bowleyana HOM05D000536 ORTHO05D001213 2.1e-07 60.5 68 50.0
MSTRG.23068 Avicennia marina HOM05D000536 ORTHO05D001213 2.8e-07 60.1 66 47.0
HanXRQChr03g0062531 Helianthus annuus HOM05D000536 ORTHO05D001213 2.8e-07 60.1 116 34.5
Peaxi162Scf00689g00547 Petunia axillaris HOM05D000536 ORTHO05D001213 2.8e-07 60.1 41 68.3
ECA232G3014 Erigeron canadensis HOM05D000536 ORTHO05D001213 3.6e-07 59.7 41 70.7
Gohir.A12G174700 Gossypium hirsutum HOM05D000536 ORTHO05D001213 3.6e-07 59.7 99 38.4
Gohir.D12G177400 Gossypium hirsutum HOM05D000536 ORTHO05D001213 3.6e-07 59.7 99 38.4
Migut.I00101 Erythranthe guttata HOM05D000536 ORTHO05D001213 4.7e-07 59.3 41 65.9
Sopen06g027490 Solanum pennellii HOM05D000536 ORTHO05D001213 4.7e-07 59.3 41 68.3
Cc04_g16020 Coffea canephora HOM05D000536 ORTHO05D001213 6.1e-07 58.9 41 68.3
Gorai.008G189800 Gossypium raimondii HOM05D000536 ORTHO05D001213 6.1e-07 58.9 99 38.4
MD14G1190400 Malus domestica HOM05D000536 ORTHO05D001213 6.1e-07 58.9 41 65.9
Peaxi162Scf00017g02016 Petunia axillaris HOM05D000536 ORTHO05D001213 6.1e-07 58.9 71 47.9
Solyc06g071180.3 Solanum lycopersicum HOM05D000536 ORTHO05D001213 6.1e-07 58.9 41 68.3
Thecc.K0000600 Theobroma cacao HOM05D000536 ORTHO05D001213 6.1e-07 58.9 96 42.7
TWI60G1120 Tripterygium wilfordii HOM05D000536 ORTHO05D001213 6.1e-07 58.9 74 48.6
FvH4_5g15920 Fragaria vesca HOM05D000536 ORTHO05D001213 8.0e-07 58.5 41 68.3
FAN04G2468 Fragaria x ananassa HOM05D000536 ORTHO05D001213 8.0e-07 58.5 41 68.3
FAN08G1897 Fragaria x ananassa HOM05D000536 ORTHO05D001213 8.0e-07 58.5 41 68.3
Hma1.2p1_1617F.1_g293790 Hydrangea macrophylla HOM05D000536 ORTHO05D001213 8.0e-07 58.5 61 52.5
MD06G1184500 Malus domestica HOM05D000536 ORTHO05D001213 8.0e-07 58.5 41 63.4
RcHm_v2.0_Chr7g0180131 Rosa chinensis HOM05D000536 ORTHO05D001213 8.0e-07 58.5 41 68.3
arahy.Tifrunner.gnm1.ann1.MWX564 Arachis hypogaea HOM05D000536 ORTHO05D001213 1.0e-06 58.2 54 51.9
arahy.Tifrunner.gnm1.ann1.YF22WB Arachis hypogaea HOM05D000536 ORTHO05D001213 1.0e-06 58.2 54 51.9
PGSC0003DMG400033063 Solanum tuberosum HOM05D000536 ORTHO05D001213 1.0e-06 58.2 41 68.3
GSVIVG01008092001 Vitis vinifera HOM05D000536 ORTHO05D001213 1.0e-06 58.2 54 59.3
CiPaw.11G034900 Carya illinoinensis HOM05D000536 ORTHO05D001213 1.4e-06 57.8 63 49.2
Nitab4.5_0000758g0040 Nicotiana tabacum HOM05D000536 ORTHO05D001213 1.4e-06 57.8 41 65.9
TAR371G0401 Trochodendron aralioides HOM05D000536 ORTHO05D001213 1.8e-06 57.4 71 42.3
vmacro16577 Vaccinium macrocarpon HOM05D000536 ORTHO05D001213 1.8e-06 57.4 132 35.6
Actinidia34970 Actinidia chinensis HOM05D000536 ORTHO05D001213 2.3e-06 57.0 77 45.5
ClCG06G016540 Citrullus lanatus HOM05D000536 ORTHO05D001213 2.3e-06 57.0 41 63.4
CsaV3_1G001970 Cucumis sativus L. HOM05D000536 ORTHO05D001213 2.3e-06 57.0 41 63.4
Manes.02G197600 Manihot esculenta HOM05D000536 ORTHO05D001213 2.3e-06 57.0 63 50.8
Oeu005677.1 Olea europaea HOM05D000536 ORTHO05D001213 2.3e-06 57.0 145 31.7
QL10p014469 Quercus lobata HOM05D000536 ORTHO05D001213 2.3e-06 57.0 55 50.9
Rhsim12G0160400 Rhododendron simsii HOM05D000536 ORTHO05D001213 2.3e-06 57.0 41 63.4
CDE04G2147 Ceratophyllum demersum HOM05D001564 ORTHO05D001439 3.0e-06 56.6 51 47.1
Haze_07404 Corylus avellana HOM05D000536 ORTHO05D001213 3.0e-06 56.6 63 50.8
Glyma.17G095200 Glycine max HOM05D000536 ORTHO05D001213 3.0e-06 56.6 54 48.1
Lsat_1_v5_gn_4_106580 Lactuca sativa HOM05D000536 ORTHO05D001213 3.0e-06 56.6 55 60.0
Ca_21866_v3 Cicer arietinum L. HOM05D000536 ORTHO05D001213 4.0e-06 56.2 116 34.5
Nn4g22985 Nelumbo nucifera HOM05D000536 ORTHO05D001213 4.0e-06 56.2 98 37.8
CAN.G999.13 Capsicum annuum HOM05D000536 ORTHO05D001213 5.2e-06 55.8 41 65.9
Cfa019029 Carpinus fangiana HOM05D000536 ORTHO05D001213 5.2e-06 55.8 63 50.8
DCAR_016524 Daucus carota HOM05D000536 ORTHO05D001213 5.2e-06 55.8 55 52.7
ECA247G4034 Erigeron canadensis HOM05D000536 ORTHO05D001213 5.2e-06 55.8 65 49.2
Nitab4.5_0000642g0110 Nicotiana tabacum HOM05D000536 ORTHO05D001213 5.2e-06 55.8 78 46.2
Phvul.003G195000 Phaseolus vulgaris HOM05D000536 ORTHO05D001213 5.2e-06 55.8 54 48.1
Solyc03g113540.3 Solanum lycopersicum HOM05D000536 ORTHO05D001213 5.2e-06 55.8 41 65.9
Sopen03g032590 Solanum pennellii HOM05D000536 ORTHO05D001213 5.2e-06 55.8 41 65.9
Aqoxy3G03192 Aquilegia oxysepala HOM05D000536 ORTHO05D001213 6.8e-06 55.5 65 46.2
MELO3C017141.2 Cucumis melo HOM05D000536 ORTHO05D001213 6.8e-06 55.5 40 62.5
Duzib068G1309 Durio zibethinus HOM05D000536 ORTHO05D001213 6.8e-06 55.5 70 44.3
HanXRQChr02g0045361 Helianthus annuus HOM05D000536 ORTHO05D001213 6.8e-06 55.5 73 43.8
Nitab4.5_0012690g0010 Nicotiana tabacum HOM05D000536 ORTHO05D001213 6.8e-06 55.5 120 37.5
Os01g0555600 Oryza sativa ssp. japonica HOM05D000536 ORTHO05D001213 6.8e-06 55.5 120 32.5
PGSC0003DMG400024462 Solanum tuberosum HOM05D000536 ORTHO05D001213 6.8e-06 55.5 65 49.2
EL10Ac5g10879 Beta vulgaris HOM05D000536 ORTHO05D001213 8.9e-06 55.1 142 31.7
Eucgr.B00387 Eucalyptus grandis HOM05D000536 ORTHO05D001213 8.9e-06 55.1 41 63.4
Lsat_1_v5_gn_1_11401 Lactuca sativa HOM05D000536 ORTHO05D001213 8.9e-06 55.1 63 50.8
SGA_v2.0_scaffold25G10852 Striga asiatica HOM05D000536 ORTHO05D001213 8.9e-06 55.1 55 50.9
TPR.G38458 Trifolium pratense HOM05D000536 ORTHO05D001213 8.9e-06 55.1 45 55.6
unitig_749.g13455 Utricularia gibba HOM05D000536 ORTHO05D001213 8.9e-06 55.1 61 45.9


User provided reference genes

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