Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 8.9e-265 916.4 461 100.0
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 2.8e-133 479.6 325 72.9
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 4.7e-133 478.8 325 73.2
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 3.2e-129 466.1 391 63.7
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 9.6e-126 454.5 386 63.5
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 3.4e-115 419.5 371 58.8
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 2.9e-114 416.4 366 58.2
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 4.9e-114 415.6 387 57.4
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 6.4e-114 415.2 388 58.5
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 1.1e-113 414.5 384 57.8
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 1.4e-113 414.1 351 60.4
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 2.4e-113 413.3 365 57.3
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 3.2e-113 412.9 387 57.1
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 5.4e-113 412.1 385 57.7
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 2.1e-112 410.2 369 58.5
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 3.0e-111 406.4 393 56.0
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 5.1e-111 405.6 447 50.8
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 1.9e-110 403.7 382 55.2
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 1.9e-110 403.7 397 56.7
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 9.6e-110 401.4 389 54.8
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 9.6e-110 401.4 391 55.8
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 1.6e-109 400.6 387 57.4
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 1.6e-109 400.6 382 55.5
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 1.6e-109 400.6 366 59.0
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 4.8e-109 399.1 387 55.6
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 4.8e-109 399.1 378 56.6
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 6.2e-109 398.7 352 59.1
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 8.1e-109 398.3 377 56.8
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 9.0e-108 394.8 397 55.2
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 2.9e-106 389.8 393 54.7
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 2.9e-106 389.8 375 57.3
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 1.1e-105 387.9 393 53.9
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 1.4e-105 387.5 386 54.9
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 7.1e-105 385.2 395 55.4
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 1.2e-104 384.4 377 57.6
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 1.6e-104 384.0 391 51.2
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 4.6e-104 382.5 373 56.3
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 7.9e-104 381.7 369 56.9
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 7.9e-104 381.7 380 55.0
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 2.3e-103 380.2 390 55.6
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 4.3e-102 375.9 386 54.1
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 5.6e-102 375.6 394 53.6
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 3.7e-101 372.9 392 53.3
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 1.8e-100 370.5 365 55.6
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 9.0e-100 368.2 388 54.4
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 7.6e-99 365.2 389 51.2
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 7.6e-99 365.2 377 55.4
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 1.0e-98 364.8 372 55.1
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 3.8e-98 362.8 384 53.4
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 1.9e-97 360.5 352 56.8
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 4.2e-97 359.4 390 51.5
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 1.6e-96 357.5 382 51.6
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 7.9e-96 355.1 358 53.9
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 1.3e-95 354.4 378 51.6
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 3.9e-95 352.8 374 54.0
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 8.7e-95 351.7 370 54.9
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 8.7e-95 351.7 371 54.2
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 1.5e-94 350.9 367 56.9
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 1.5e-94 350.9 365 54.5
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 1.9e-94 350.5 383 49.1
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 2.5e-94 350.1 358 53.6
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 4.3e-94 349.4 386 50.8
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 4.3e-94 349.4 378 51.6
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 2.1e-93 347.1 359 54.9
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 2.8e-93 346.7 314 59.9
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 4.8e-93 345.9 356 53.7
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 1.4e-92 344.4 356 53.9
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 4.1e-92 342.8 356 53.4
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 2.6e-91 340.1 356 53.7
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 7.6e-91 338.6 356 52.8
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 2.2e-90 337.0 371 52.8
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 2.9e-90 336.7 359 53.2
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 2.9e-90 336.7 356 52.8
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 1.1e-89 334.7 354 52.8
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 1.9e-89 334.0 359 52.4
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 1.9e-89 334.0 396 46.0
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 7.2e-89 332.0 447 45.9
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 1.0e-87 328.2 341 53.1
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 1.0e-87 328.2 392 50.3
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 2.3e-87 327.0 341 52.8
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 3.9e-87 326.2 341 52.8
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 5.1e-87 325.9 380 49.5
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 6.7e-87 325.5 327 54.4
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 1.8e-84 317.4 298 56.7
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 6.9e-84 315.5 384 47.4
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 4.5e-83 312.8 339 50.7
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 1.0e-82 311.6 317 55.5
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 1.4e-81 307.8 273 56.8
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 1.9e-81 307.4 394 47.7
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 8.8e-79 298.5 299 54.5
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 1.3e-77 294.7 258 60.9
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 6.3e-77 292.4 281 55.5
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.4e-76 291.2 279 57.0
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 1.3e-74 284.6 279 54.8
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 1.7e-69 267.7 233 59.2
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 2.0e-67 260.8 240 57.5
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 2.9e-66 256.9 282 49.3
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 3.2e-65 253.4 358 42.7
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 3.2e-65 253.4 406 39.4
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 3.6e-64 250.0 313 47.9
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 2.3e-63 247.3 351 42.7
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.4e-60 238.0 213 58.2
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 4.5e-59 233.0 342 39.2
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 2.5e-57 227.3 279 48.0
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 7.5e-54 215.7 179 60.9
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 3.5e-51 206.8 172 61.0
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 2.3e-39 167.5 273 44.3
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 1.4e-36 158.3 255 37.3
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 8.6e-34 149.1 202 42.1
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 3.7e-29 133.7 106 58.5
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 5.0e-26 123.2 333 30.9
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 2.8e-24 117.5 265 32.8
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 1.8e-23 114.8 116 54.3
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 2.4e-20 104.4 152 39.5
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 3.3e-17 94.0 116 45.7
Ah.07g199480 Amaranthus hybridus HOM05D004191 ORTHO05D060174 1.9e-12 78.2 76 57.9
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 6.0e-11 73.2 55 63.6
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 1.1e-09 68.9 42 73.8
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 5.6e-09 66.6 67 55.2
Nn2g16007 Nelumbo nucifera HOM05D006491 ORTHO05D008412 9.0e-07 59.3 80 43.8


User provided reference genes

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