Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund26238 Selenicereus undatus HOM05D003644 ORTHO05D004305 3.2e-104 381.7 188 100.0
Hund09225 Selenicereus undatus HOM05D003644 ORTHO05D004305 1.6e-42 176.8 204 55.4
AUR62010940 Chenopodium quinoa HOM05D003644 ORTHO05D004305 9.9e-37 157.5 203 54.2
EL10Ac8g18428 Beta vulgaris HOM05D003644 ORTHO05D004305 1.1e-27 127.5 202 46.0
GSVIVG01015346001 Vitis vinifera HOM05D003644 ORTHO05D004305 4.1e-27 125.6 198 48.0
Thecc.09G105500 Theobroma cacao HOM05D003644 ORTHO05D004305 2.1e-26 123.2 201 46.3
Duzib168G0231 Durio zibethinus HOM05D003644 ORTHO05D004305 1.4e-22 110.5 200 43.5
MBI04_g14930_MAGBIO Magnolia biondii HOM05D003644 ORTHO05D004305 1.4e-22 110.5 201 42.8
Duzib150G1566 Durio zibethinus HOM05D003644 ORTHO05D004305 1.8e-22 110.2 202 44.1
Oeu015581.1 Olea europaea HOM05D003644 ORTHO05D004305 2.4e-22 109.8 199 44.7
TAR624G1421 Trochodendron aralioides HOM05D003644 ORTHO05D004305 3.1e-22 109.4 198 46.5
CSS0010496 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 5.2e-22 108.6 199 42.7
CSS0033414 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 5.2e-22 108.6 199 42.7
Duzib187G1156 Durio zibethinus HOM05D003644 ORTHO05D004305 5.2e-22 108.6 205 42.4
TAR636G2793 Trochodendron aralioides HOM05D003644 ORTHO05D004305 9.0e-22 107.8 200 44.0
THA.LOC104814562 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 1.2e-21 107.5 203 39.9
Thhalv10002311m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 1.4e-19 100.5 203 39.4
CiPaw.03G227900 Carya illinoinensis HOM05D003644 ORTHO05D004305 4.2e-19 99.0 201 39.8
Cpa.g.sc23.57 Carica papaya HOM05D003644 ORTHO05D004305 5.4e-19 98.6 201 42.8
Gorai.010G073900 Gossypium raimondii HOM05D003644 ORTHO05D004305 7.1e-19 98.2 203 42.4
Manes.16G112500 Manihot esculenta HOM05D003644 ORTHO05D004305 7.1e-19 98.2 199 42.2
CSS0008241 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 9.3e-19 97.8 202 42.1
Nn3g18137 Nelumbo nucifera HOM05D003644 ORTHO05D004305 1.6e-18 97.1 199 40.7
Potri.006G161100 Populus trichocarpa HOM05D003644 ORTHO05D004305 1.6e-18 97.1 202 39.6
Ciclev10010512m.g Citrus clementina HOM05D003644 ORTHO05D004305 2.1e-18 96.7 209 39.2
Nn2g11654 Nelumbo nucifera HOM05D003644 ORTHO05D004305 2.1e-18 96.7 203 41.4
QL02p044635 Quercus lobata HOM05D003644 ORTHO05D004305 2.7e-18 96.3 205 40.0
Haze_25785 Corylus avellana HOM05D003644 ORTHO05D004305 4.6e-18 95.5 202 42.6
FvH4_1g05660 Fragaria vesca HOM05D003644 ORTHO05D004305 4.6e-18 95.5 208 35.6
FAN19G0617 Fragaria x ananassa HOM05D003644 ORTHO05D004305 4.6e-18 95.5 208 35.6
Hund09226 Selenicereus undatus HOM05D003644 ORTHO05D004305 6.0e-18 95.1 195 37.9
Sp3g33380 Schrenkiella parvula HOM05D003644 ORTHO05D004305 7.8e-18 94.7 204 39.7
FAN26G0903 Fragaria x ananassa HOM05D003644 ORTHO05D004305 1.0e-17 94.4 210 34.8
Manes.03G024200 Manihot esculenta HOM05D003644 ORTHO05D004305 1.0e-17 94.4 202 40.6
Oeu002262.2 Olea europaea HOM05D003644 ORTHO05D004305 1.0e-17 94.4 144 50.0
Gohir.D06G063400 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.3e-17 94.0 204 41.7
FAN26G3023 Fragaria x ananassa HOM05D003644 ORTHO05D004305 1.7e-17 93.6 209 34.9
Lj2g0017641 Lotus japonicus HOM05D003644 ORTHO05D004305 3.0e-17 92.8 198 39.9
Sed0019018 Sechium edule HOM05D003644 ORTHO05D004305 3.0e-17 92.8 204 36.3
VMungo0251G1747 Vigna mungo HOM05D003644 ORTHO05D004305 5.1e-17 92.0 201 40.8
Glyma.09G193400 Glycine max HOM05D003644 ORTHO05D004305 6.6e-17 91.7 198 40.9
MELO3C004570.2 Cucumis melo HOM05D003644 ORTHO05D004305 8.7e-17 91.3 205 37.1
Dinv41640 Davidia involucrata HOM05D003644 ORTHO05D004305 8.7e-17 91.3 154 44.2
Gorai.001G007300 Gossypium raimondii HOM05D003644 ORTHO05D004305 8.7e-17 91.3 197 42.6
AL3G48010 Arabidopsis lyrata HOM05D003644 ORTHO05D004305 1.1e-16 90.9 202 37.6
Glyma.05G229100 Glycine max HOM05D003644 ORTHO05D004305 1.1e-16 90.9 199 41.2
Peaxi162Scf00231g00061 Petunia axillaris HOM05D003644 ORTHO05D004305 1.1e-16 90.9 204 41.2
PGR142G1369 Punica granatum HOM05D003644 ORTHO05D004305 1.1e-16 90.9 208 38.0
Peaxi162Scf00665g00003 Petunia axillaris HOM05D003644 ORTHO05D004305 1.5e-16 90.5 200 37.5
A09p59020 Brassica napus HOM05D003644 ORTHO05D004305 2.5e-16 89.7 202 38.1
BraA09t41288Z Brassica rapa HOM05D003644 ORTHO05D004305 2.5e-16 89.7 202 38.1
Carub.0007s1180 Capsella rubella HOM05D003644 ORTHO05D004305 4.3e-16 89.0 207 38.2
FAN28G1311 Fragaria x ananassa HOM05D003644 ORTHO05D004305 4.3e-16 89.0 219 34.2
ClCG11G002330 Citrullus lanatus HOM05D003644 ORTHO05D004305 5.6e-16 88.6 212 37.3
FAN23G2152 Fragaria x ananassa HOM05D003644 ORTHO05D004305 9.6e-16 87.8 219 34.7
Potri.018G084100 Populus trichocarpa HOM05D003644 ORTHO05D004305 9.6e-16 87.8 202 39.1
BolC7t46126H Brassica oleracea HOM05D003644 ORTHO05D004305 1.3e-15 87.4 206 38.8
DCAR_012057 Daucus carota HOM05D003644 ORTHO05D004305 1.3e-15 87.4 205 38.5
C07p56470 Brassica napus HOM05D003644 ORTHO05D004305 1.6e-15 87.0 206 38.8
ECA234G2378 Erigeron canadensis HOM05D003644 ORTHO05D004305 1.6e-15 87.0 188 39.4
AT4G28840 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 2.1e-15 86.7 206 37.4
A03p58450 Brassica napus HOM05D003644 ORTHO05D004305 2.1e-15 86.7 206 38.8
PGSC0003DMG400003139 Solanum tuberosum HOM05D003644 ORTHO05D004305 2.8e-15 86.3 194 40.2
BcaC07g41224 Brassica carinata HOM05D003644 ORTHO05D004305 3.6e-15 85.9 202 37.6
PGSC0003DMG400000374 Solanum tuberosum HOM05D003644 ORTHO05D004305 3.6e-15 85.9 206 37.9
TWI34G1832 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 3.6e-15 85.9 210 38.6
MSTRG.19571 Avicennia marina HOM05D003644 ORTHO05D004305 4.8e-15 85.5 204 39.2
BcaC06g32601 Brassica carinata HOM05D003644 ORTHO05D004305 4.8e-15 85.5 205 36.6
CANSAT56G0200 Cannabis sativa HOM05D003644 ORTHO05D004305 4.8e-15 85.5 225 37.3
TWI32G0193 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 6.2e-15 85.1 198 39.4
CARHR110580 Cardamine hirsuta HOM05D003644 ORTHO05D004305 8.1e-15 84.7 202 36.1
C08p42300 Brassica napus HOM05D003644 ORTHO05D004305 1.1e-14 84.3 202 37.1
BolC8t51790H Brassica oleracea HOM05D003644 ORTHO05D004305 1.1e-14 84.3 202 37.1
Sopen12g003210 Solanum pennellii HOM05D003644 ORTHO05D004305 1.1e-14 84.3 206 37.9
Phvul.004G168350 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 3.1e-14 82.8 203 38.4
CsaV3_2G002110 Cucumis sativus L. HOM05D003644 ORTHO05D004305 4.0e-14 82.4 205 35.1
Gohir.D07G007600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 4.0e-14 82.4 197 40.6
Gohir.A07G004600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 5.3e-14 82.0 186 41.9
Sopen07g007520 Solanum pennellii HOM05D003644 ORTHO05D004305 5.3e-14 82.0 203 35.5
ClCG06G008860 Citrullus lanatus HOM05D003644 ORTHO05D004305 6.9e-14 81.6 208 35.6
Psat1g044920 Pisum sativum HOM05D003644 ORTHO05D004305 6.9e-14 81.6 199 37.2
Aqoxy7G01525 Aquilegia oxysepala HOM05D003644 ORTHO05D004305 1.2e-13 80.9 197 38.1
RcHm_v2.0_Chr2g0091291 Rosa chinensis HOM05D003644 ORTHO05D004305 1.2e-13 80.9 180 36.7
SalBow6G0047 Salvia bowleyana HOM05D003644 ORTHO05D004305 1.2e-13 80.9 206 35.4
Gohir.A06G064800 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.5e-13 80.5 203 38.4
PSO782G2161 Papaver somniferum HOM05D003644 ORTHO05D004305 1.5e-13 80.5 206 35.9
Phvul.002G311400 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 1.5e-13 80.5 200 36.5
Medtr6g088280 Medicago truncatula HOM05D003644 ORTHO05D004305 2.6e-13 79.7 199 38.7
Prupe.7G225200 Prunus persica HOM05D003644 ORTHO05D004305 2.6e-13 79.7 215 35.3
Sc18g0001380 Simmondsia chinensis HOM05D003644 ORTHO05D004305 2.6e-13 79.7 199 34.2
Sabra18G0072500 Salix brachista HOM05D003644 ORTHO05D004305 3.4e-13 79.3 222 33.8
TPR.G34913 Trifolium pratense HOM05D003644 ORTHO05D004305 3.4e-13 79.3 208 38.5
Glyma.08G036100 Glycine max HOM05D003644 ORTHO05D004305 4.5e-13 79.0 201 38.3
PSO566G0277 Papaver somniferum HOM05D003644 ORTHO05D004305 5.8e-13 78.6 206 35.9
Sed0028016 Sechium edule HOM05D003644 ORTHO05D004305 5.8e-13 78.6 206 36.9
VMungo0464G0020 Vigna mungo HOM05D003644 ORTHO05D004305 5.8e-13 78.6 203 36.0
Atru.chr7.1390 Acer truncatum HOM05D003644 ORTHO05D004305 7.6e-13 78.2 212 34.0
Sp7g26840 Schrenkiella parvula HOM05D003644 ORTHO05D004305 7.6e-13 78.2 208 35.6
Sc08g0007690 Simmondsia chinensis HOM05D003644 ORTHO05D004305 1.3e-12 77.4 206 36.4
BolC7t40541H Brassica oleracea HOM05D003644 ORTHO05D004305 1.7e-12 77.0 200 35.5
CAN.G1774.6 Capsicum annuum HOM05D003644 ORTHO05D004305 2.2e-12 76.6 172 36.6
arahy.Tifrunner.gnm1.ann1.XM0XDL Arachis hypogaea HOM05D003644 ORTHO05D004305 2.9e-12 76.3 215 33.0
BolC1t01024H Brassica oleracea HOM05D003644 ORTHO05D004305 2.9e-12 76.3 207 36.2
Sed0013314 Sechium edule HOM05D003644 ORTHO05D004305 2.9e-12 76.3 194 31.4
Cc06_g10070 Coffea canephora HOM05D003644 ORTHO05D004305 4.9e-12 75.5 203 36.0
MSTRG.6013 Avicennia marina HOM05D003644 ORTHO05D004305 6.4e-12 75.1 201 35.3
A01p09070 Brassica napus HOM05D003644 ORTHO05D004305 6.4e-12 75.1 207 36.2
C01p10620 Brassica napus HOM05D003644 ORTHO05D004305 6.4e-12 75.1 207 36.2
C09p15050 Brassica napus HOM05D003644 ORTHO05D004305 6.4e-12 75.1 156 40.4
BraA01t00855Z Brassica rapa HOM05D003644 ORTHO05D004305 6.4e-12 75.1 207 36.2
arahy.Tifrunner.gnm1.ann1.TDG8V6 Arachis hypogaea HOM05D003644 ORTHO05D004305 8.4e-12 74.7 209 36.4
CsaV3_1G021830 Cucumis sativus L. HOM05D003644 ORTHO05D004305 8.4e-12 74.7 205 33.7
MELO3C024703.2 Cucumis melo HOM05D003644 ORTHO05D004305 1.9e-11 73.6 205 31.2
Gohir.D05G026700 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.9e-11 73.6 215 35.8
MD02G1057600 Malus domestica HOM05D003644 ORTHO05D004305 3.2e-11 72.8 208 34.1
BcaC04g22808 Brassica carinata HOM05D003644 ORTHO05D004305 5.4e-11 72.0 156 36.5
BcaNung01359 Brassica carinata HOM05D003644 ORTHO05D004305 5.4e-11 72.0 198 36.9
BcaNung04091 Brassica carinata HOM05D003644 ORTHO05D004305 5.4e-11 72.0 186 36.6
A09p12690 Brassica napus HOM05D003644 ORTHO05D004305 5.4e-11 72.0 166 35.5
BolC9t54408H Brassica oleracea HOM05D003644 ORTHO05D004305 5.4e-11 72.0 156 36.5
Glyma.01G145600 Glycine max HOM05D003644 ORTHO05D004305 5.4e-11 72.0 203 35.5
COL.COLO4_34805 Corchorus olitorius HOM05D003644 ORTHO05D004305 7.1e-11 71.6 201 34.8
THA.LOC104804017 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 7.1e-11 71.6 190 35.3
AT2G20080 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 1.2e-10 70.9 200 31.0
Hma1.2p1_0945F.1_g240090 Hydrangea macrophylla HOM05D003644 ORTHO05D004305 1.2e-10 70.9 202 35.6
Lsat_1_v5_gn_8_96040 Lactuca sativa HOM05D003644 ORTHO05D004305 1.6e-10 70.5 144 42.4
A07p00580 Brassica napus HOM05D003644 ORTHO05D004305 2.1e-10 70.1 102 45.1
Gorai.009G026800 Gossypium raimondii HOM05D003644 ORTHO05D004305 2.1e-10 70.1 220 35.5
Carub.0003s3436 Capsella rubella HOM05D003644 ORTHO05D004305 4.6e-10 68.9 184 35.9
Aa31LG2G21540 Aethionema arabicum HOM05D003644 ORTHO05D004305 7.9e-10 68.2 138 39.9
BcaC07g41225 Brassica carinata HOM05D003644 ORTHO05D004305 7.9e-10 68.2 173 37.6
Ah.09g230910 Amaranthus hybridus HOM05D003644 ORTHO05D004305 1.0e-09 67.8 87 46.0
BcaC06g36690 Brassica carinata HOM05D003644 ORTHO05D004305 1.0e-09 67.8 100 44.0
BcaB08g34898 Brassica carinata HOM05D003644 ORTHO05D004305 1.3e-09 67.4 173 37.0
Thhalv10026355m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 1.3e-09 67.4 196 34.2
BcaB03g16807 Brassica carinata HOM05D003644 ORTHO05D004305 1.8e-09 67.0 104 45.2
BcaC09g51666 Brassica carinata HOM05D003644 ORTHO05D004305 2.3e-09 66.6 199 35.2
Gohir.A05G025200 Gossypium hirsutum HOM05D003644 ORTHO05D004305 2.3e-09 66.6 215 34.9
BraA07t27854Z Brassica rapa HOM05D003644 ORTHO05D004305 3.9e-09 65.9 102 43.1
MD15G1192000 Malus domestica HOM05D003644 ORTHO05D004305 3.9e-09 65.9 207 32.9
C07p01040 Brassica napus HOM05D003644 ORTHO05D004305 8.7e-09 64.7 198 34.3
Lalb_Chr16g0388081 Lupinus albus HOM05D003644 ORTHO05D004305 1.1e-08 64.3 109 45.9
Migut.K00491 Erythranthe guttata HOM05D003644 ORTHO05D004305 3.3e-08 62.8 201 34.3
PGR102G0050 Punica granatum HOM05D003644 ORTHO05D004305 3.3e-08 62.8 173 30.6
Actinidia09436 Actinidia chinensis HOM05D003644 ORTHO05D004305 4.3e-08 62.4 197 33.5
Rhsim05G0043500 Rhododendron simsii HOM05D003644 ORTHO05D004305 5.6e-08 62.0 57 66.7
arahy.Tifrunner.gnm1.ann1.R9ZCFD Arachis hypogaea HOM05D003644 ORTHO05D004305 7.4e-08 61.6 160 34.4
Zm00001eb360290 Zea mays HOM05D003644 ORTHO05D004305 1.3e-07 60.8 207 32.4
BraA09t36915Z Brassica rapa HOM05D003644 ORTHO05D004305 1.6e-07 60.5 74 50.0
Aa31LG8G17030 Aethionema arabicum HOM05D003644 ORTHO05D004305 2.1e-07 60.1 146 38.4
Actinidia20403 Actinidia chinensis HOM05D003644 ORTHO05D004305 2.8e-07 59.7 196 34.7
arahy.Tifrunner.gnm1.ann1.X7P2RE Arachis hypogaea HOM05D003644 ORTHO05D004305 6.2e-07 58.5 142 36.6
Os01g0676900 Oryza sativa ssp. japonica HOM05D003644 ORTHO05D004305 6.2e-07 58.5 199 33.2
DCAR_010477 Daucus carota HOM05D003644 ORTHO05D004305 1.1e-06 57.8 197 30.5
Ah.09g230900 Amaranthus hybridus HOM05D003644 ORTHO05D004305 4.0e-06 55.8 215 29.8
Zm00001eb156860 Zea mays HOM05D003644 ORTHO05D004305 5.3e-06 55.5 205 32.7


User provided reference genes

Program Settings