Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund26110 Selenicereus undatus HOM05D005951 ORTHO05D007025 5.7e-118 427.6 210 100.0
GSVIVG01015014001 Vitis vinifera HOM05D005951 ORTHO05D007025 2.6e-94 349.0 225 75.1
EL10Ac8g18966 Beta vulgaris HOM05D005951 ORTHO05D007025 5.7e-94 347.8 238 74.4
AUR62028321 Chenopodium quinoa HOM05D005951 ORTHO05D007025 1.7e-93 346.3 240 73.8
Eucgr.C03197 Eucalyptus grandis HOM05D005951 ORTHO05D007025 1.1e-92 343.6 227 75.8
Eucgr.L02230 Eucalyptus grandis HOM05D005951 ORTHO05D007025 1.1e-92 343.6 227 75.8
Cpa.g.sc82.63 Carica papaya HOM05D005951 ORTHO05D007025 1.4e-92 343.2 225 73.8
MELO3C015553.2 Cucumis melo HOM05D005951 ORTHO05D007025 1.8e-92 342.8 216 76.4
Nitab4.5_0000170g0090 Nicotiana tabacum HOM05D005951 ORTHO05D007025 2.4e-92 342.4 232 73.3
Duzib168G0975 Durio zibethinus HOM05D005951 ORTHO05D007025 4.1e-92 341.7 225 74.2
Atru.chr7.1767 Acer truncatum HOM05D005951 ORTHO05D007025 5.4e-92 341.3 233 72.1
Dinv25506 Davidia involucrata HOM05D005951 ORTHO05D007025 5.4e-92 341.3 226 73.0
Thecc.09G070300 Theobroma cacao HOM05D005951 ORTHO05D007025 7.0e-92 340.9 222 75.2
Cfa002937 Carpinus fangiana HOM05D005951 ORTHO05D007025 9.2e-92 340.5 227 72.7
Gorai.009G038100 Gossypium raimondii HOM05D005951 ORTHO05D007025 1.2e-91 340.1 225 73.3
CSS0032580 Camellia sinensis var. sinensis HOM05D005951 ORTHO05D007025 1.6e-91 339.7 225 72.9
Potri.006G136500 Populus trichocarpa HOM05D005951 ORTHO05D007025 5.9e-91 337.8 219 75.3
TAR383G1060 Trochodendron aralioides HOM05D005951 ORTHO05D007025 7.8e-91 337.4 232 72.0
CiPaw.03G200400 Carya illinoinensis HOM05D005951 ORTHO05D007025 1.0e-90 337.0 230 71.3
FvH4_1g09390 Fragaria vesca HOM05D005951 ORTHO05D007025 1.3e-90 336.7 224 73.7
FAN19G2090 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.3e-90 336.7 224 73.7
CiPaw.04G140200 Carya illinoinensis HOM05D005951 ORTHO05D007025 1.7e-90 336.3 230 70.9
FAN28G0037 Fragaria x ananassa HOM05D005951 ORTHO05D007025 2.3e-90 335.9 224 73.2
FAN28G0822 Fragaria x ananassa HOM05D005951 ORTHO05D007025 2.3e-90 335.9 224 73.2
RcHm_v2.0_Chr2g0095941 Rosa chinensis HOM05D005951 ORTHO05D007025 2.3e-90 335.9 225 72.4
Gohir.D05G037600 Gossypium hirsutum HOM05D005951 ORTHO05D007025 2.9e-90 335.5 225 72.9
FAN26G0600 Fragaria x ananassa HOM05D005951 ORTHO05D007025 3.9e-90 335.1 224 73.2
FAN26G2189 Fragaria x ananassa HOM05D005951 ORTHO05D007025 3.9e-90 335.1 224 72.8
Peaxi162Scf00474g00521 Petunia axillaris HOM05D005951 ORTHO05D007025 3.9e-90 335.1 230 71.7
Solyc07g042570.3 Solanum lycopersicum HOM05D005951 ORTHO05D007025 3.9e-90 335.1 225 71.6
Potri.018G063600 Populus trichocarpa HOM05D005951 ORTHO05D007025 5.0e-90 334.7 219 75.3
CsaV3_1G041410 Cucumis sativus L. HOM05D005951 ORTHO05D007025 6.6e-90 334.3 233 71.2
Sed0027227 Sechium edule HOM05D005951 ORTHO05D007025 6.6e-90 334.3 233 70.4
ClCG03G014750 Citrullus lanatus HOM05D005951 ORTHO05D007025 1.1e-89 333.6 233 70.4
Nn6g35632 Nelumbo nucifera HOM05D005951 ORTHO05D007025 1.1e-89 333.6 225 72.9
QL11p002956 Quercus lobata HOM05D005951 ORTHO05D007025 1.1e-89 333.6 218 74.3
Sopen07g022260 Solanum pennellii HOM05D005951 ORTHO05D007025 1.1e-89 333.6 225 71.1
FAN23G1113 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.5e-89 333.2 228 71.9
Lj4g0000458 Lotus japonicus HOM05D005951 ORTHO05D007025 1.5e-89 333.2 230 70.9
Glyma.17G045500 Glycine max HOM05D005951 ORTHO05D007025 1.9e-89 332.8 230 70.4
PGSC0003DMG400013572 Solanum tuberosum HOM05D005951 ORTHO05D007025 1.9e-89 332.8 225 71.1
MD02G1102200 Malus domestica HOM05D005951 ORTHO05D007025 4.3e-89 331.6 234 70.5
Manes.16G090500 Manihot esculenta HOM05D005951 ORTHO05D007025 4.3e-89 331.6 219 73.5
Sed0006808 Sechium edule HOM05D005951 ORTHO05D007025 4.3e-89 331.6 233 70.4
Haze_26069 Corylus avellana HOM05D005951 ORTHO05D007025 5.6e-89 331.3 242 68.2
Gohir.A05G036100 Gossypium hirsutum HOM05D005951 ORTHO05D007025 5.6e-89 331.3 233 70.4
MD15G1223700 Malus domestica HOM05D005951 ORTHO05D007025 7.3e-89 330.9 234 69.7
Manes.03G044600 Manihot esculenta HOM05D005951 ORTHO05D007025 9.5e-89 330.5 235 68.9
Duzib150G0422 Durio zibethinus HOM05D005951 ORTHO05D007025 1.2e-88 330.1 225 71.6
Sabra06G0106700 Salix brachista HOM05D005951 ORTHO05D007025 1.2e-88 330.1 219 73.5
VMungo1215G3086 Vigna mungo HOM05D005951 ORTHO05D007025 1.2e-88 330.1 230 70.9
Ciclev10009369m.g Citrus clementina HOM05D005951 ORTHO05D007025 1.6e-88 329.7 233 70.8
COL.COLO4_21208 Corchorus olitorius HOM05D005951 ORTHO05D007025 2.8e-88 328.9 222 73.9
Actinidia39617 Actinidia chinensis HOM05D005951 ORTHO05D007025 4.7e-88 328.2 219 73.1
Glyma.13G114300 Glycine max HOM05D005951 ORTHO05D007025 4.7e-88 328.2 230 70.4
CAN.G54.13 Capsicum annuum HOM05D005951 ORTHO05D007025 6.1e-88 327.8 232 69.8
Phvul.003G127300 Phaseolus vulgaris HOM05D005951 ORTHO05D007025 6.1e-88 327.8 230 70.4
Prupe.7G192100 Prunus persica HOM05D005951 ORTHO05D007025 1.0e-87 327.0 233 69.1
Aqoxy7G04154 Aquilegia oxysepala HOM05D005951 ORTHO05D007025 1.8e-87 326.2 232 69.4
arahy.Tifrunner.gnm1.ann1.JRQ3DB Arachis hypogaea HOM05D005951 ORTHO05D007025 3.1e-87 325.5 233 68.2
arahy.Tifrunner.gnm1.ann1.7AU96Q Arachis hypogaea HOM05D005951 ORTHO05D007025 4.0e-87 325.1 234 67.9
Lsat_1_v5_gn_5_138841 Lactuca sativa HOM05D005951 ORTHO05D007025 4.0e-87 325.1 224 68.8
Medtr4g124640 Medicago truncatula HOM05D005951 ORTHO05D007025 6.8e-87 324.3 219 72.6
MSTRG.26500 Avicennia marina HOM05D005951 ORTHO05D007025 8.9e-87 323.9 218 71.6
Oeu041808.1 Olea europaea HOM05D005951 ORTHO05D007025 1.2e-86 323.6 219 70.8
PGR044G1586 Punica granatum HOM05D005951 ORTHO05D007025 1.5e-86 323.2 230 71.3
TWI34G0930 Tripterygium wilfordii HOM05D005951 ORTHO05D007025 1.5e-86 323.2 236 67.8
ATR0317G112 Amborella trichopoda HOM05D005951 ORTHO05D007025 7.5e-86 320.9 232 68.1
Cc06_g12700 Coffea canephora HOM05D005951 ORTHO05D007025 7.5e-86 320.9 219 71.2
THA.LOC104803783 Tarenaya hassleriana HOM05D005951 ORTHO05D007025 9.8e-86 320.5 232 69.0
PSO724G0923 Papaver somniferum HOM05D005951 ORTHO05D007025 1.3e-85 320.1 231 68.4
DCAR_028530 Daucus carota HOM05D005951 ORTHO05D007025 1.7e-85 319.7 225 69.3
PSO135G0575 Papaver somniferum HOM05D005951 ORTHO05D007025 1.7e-85 319.7 231 68.4
Ca_21339_v3 Cicer arietinum L. HOM05D000240 ORTHO05D002721 2.2e-85 319.3 236 68.6
Lalb_Chr13g0299191 Lupinus albus HOM05D005951 ORTHO05D007025 2.9e-85 318.9 226 69.5
Sp7g31000 Schrenkiella parvula HOM05D005951 ORTHO05D007025 2.9e-85 318.9 232 68.1
CANSAT56G0193 Cannabis sativa HOM05D005951 ORTHO05D007025 2.4e-84 315.8 217 71.0
Thhalv10026154m.g Eutrema salsugineum HOM05D005951 ORTHO05D007025 3.2e-84 315.5 232 66.4
Lalb_Chr07g0181411 Lupinus albus HOM05D005951 ORTHO05D007025 3.2e-84 315.5 231 67.5
AL7G18300 Arabidopsis lyrata HOM05D005951 ORTHO05D007025 5.4e-84 314.7 224 67.4
CANSAT56G0116 Cannabis sativa HOM05D005951 ORTHO05D007025 5.4e-84 314.7 217 71.0
ECA234G1587 Erigeron canadensis HOM05D005951 ORTHO05D007025 5.4e-84 314.7 231 66.2
BcaC01g01000 Brassica carinata HOM05D005951 ORTHO05D007025 7.0e-84 314.3 222 67.6
BolC3t20971H Brassica oleracea HOM05D005951 ORTHO05D007025 7.0e-84 314.3 222 67.6
MBI13_g01673_MAGBIO Magnolia biondii HOM05D005951 ORTHO05D007025 7.0e-84 314.3 229 66.4
HPP92_004361 Vanilla planifolia HOM05D005951 ORTHO05D007025 9.2e-84 313.9 219 69.4
BcaB03g12809 Brassica carinata HOM05D005951 ORTHO05D007025 1.2e-83 313.5 232 65.5
BraA01t00476Z Brassica rapa HOM05D000526 ORTHO05D007025 1.2e-83 313.5 232 66.8
BraA08t33722Z Brassica rapa HOM05D005951 ORTHO05D007025 2.0e-83 312.8 233 66.5
Migut.J00881 Erythranthe guttata HOM05D005951 ORTHO05D007025 2.0e-83 312.8 225 68.0
BcaC09g52137 Brassica carinata HOM05D005951 ORTHO05D007025 2.7e-83 312.4 232 66.8
A08p17720 Brassica napus HOM05D005951 ORTHO05D007025 2.7e-83 312.4 223 68.2
C03p86770 Brassica napus HOM05D005951 ORTHO05D007025 6.0e-83 311.2 233 66.5
C01p05390 Brassica napus HOM05D000526 ORTHO05D000956 2.3e-82 309.3 222 67.6
SEGI_21232 Sequoiadendron giganteum HOM05D005951 ORTHO05D007025 3.0e-82 308.9 223 65.9
BolC1t00519H Brassica oleracea HOM05D000526 ORTHO05D007025 5.0e-82 308.1 222 67.1
Nitab4.5_0003139g0080 Nicotiana tabacum HOM05D005951 ORTHO05D007025 5.0e-82 308.1 215 70.7
Zm00001eb401690 Zea mays HOM05D005951 ORTHO05D007025 6.6e-82 307.8 225 67.1
TPR.G12577 Trifolium pratense HOM05D005951 ORTHO05D007025 1.1e-81 307.0 213 69.0
Os03g0182700 Oryza sativa ssp. japonica HOM05D005951 ORTHO05D007025 1.5e-81 306.6 225 65.8
SGA_v2.0_scaffold55G19875 Striga asiatica HOM05D005951 ORTHO05D007025 1.9e-81 306.2 238 65.1
Rhsim05G0002100 Rhododendron simsii HOM05D005951 ORTHO05D007025 2.5e-81 305.8 220 68.6
Carub.0007s0721 Capsella rubella HOM05D005951 ORTHO05D007025 4.3e-81 305.1 233 64.4
Aa31LG5G9380 Aethionema arabicum HOM05D005951 ORTHO05D007025 1.6e-80 303.1 219 67.6
AT4G33250 Arabidopsis thaliana HOM05D005951 ORTHO05D007025 1.6e-80 303.1 224 66.5
HanXRQChr10g0319821 Helianthus annuus HOM05D005951 ORTHO05D007025 2.1e-80 302.8 229 67.2
A03p61920 Brassica napus HOM05D000526 ORTHO05D007025 6.2e-80 301.2 248 61.7
CDE07G2051 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 3.1e-79 298.9 230 63.0
Oeu000276.3 Olea europaea HOM05D005951 ORTHO05D007025 5.2e-79 298.1 302 52.6
unitig_899.g15181 Utricularia gibba HOM05D005951 ORTHO05D007025 4.4e-78 295.0 225 63.1
Mapoly0073s0056 Marchantia polymorpha HOM05D005951 ORTHO05D007025 5.4e-76 288.1 226 61.1
Pp3c18_14720 Physcomitrium patens HOM05D005951 ORTHO05D007025 7.1e-76 287.7 225 61.8
Pp3c21_14860 Physcomitrium patens HOM05D005951 ORTHO05D007025 7.1e-76 287.7 225 60.9
AUR62025338 Chenopodium quinoa HOM05D005951 ORTHO05D007025 2.7e-75 285.8 192 74.5
Lj7C692T6 Lonicera japonica HOM05D005951 ORTHO05D007025 3.5e-75 285.4 219 65.8
vmacro17078 Vaccinium macrocarpon HOM05D005951 ORTHO05D007025 2.3e-74 282.7 311 50.5
Actinidia30258 Actinidia chinensis HOM05D005951 ORTHO05D007025 6.6e-74 281.2 189 72.0
BcaNung02163 Brassica carinata HOM05D005951 ORTHO05D007025 2.1e-72 276.2 222 62.6
C07p59570 Brassica napus HOM05D005951 ORTHO05D007025 4.7e-72 275.0 222 63.1
MBI19_g36230_MAGBIO Magnolia biondii HOM05D005951 ORTHO05D007025 1.1e-71 273.9 232 61.2
SMO239G0051 Selaginella moellendorffii HOM05D005951 ORTHO05D007025 3.4e-70 268.9 225 56.0
BraA03t15230Z Brassica rapa HOM05D005951 ORTHO05D007025 4.1e-68 261.9 183 68.9
Zm00001eb401710 Zea mays HOM05D005951 ORTHO05D007025 7.8e-67 257.7 198 64.1
CDE06G1359 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 9.9e-62 240.7 194 60.3
Sc08g0009170 Simmondsia chinensis HOM05D005951 ORTHO05D007025 2.3e-58 229.6 156 74.4
BolC7t46402H Brassica oleracea HOM05D005951 ORTHO05D007025 1.9e-57 226.5 197 59.9
Zm00001eb006150 Zea mays HOM05D005951 ORTHO05D007025 2.0e-54 216.5 168 62.5
Migut.L01596 Erythranthe guttata HOM05D005951 ORTHO05D007025 2.2e-53 213.0 207 56.0
CBR_g16046 Chara braunii HOM05D005951 ORTHO05D007025 1.1e-47 194.1 218 46.8
AagrBONN_evm.TU.Sc2ySwM_117.912 Anthoceros agrestis HOM05D005951 ORTHO05D007025 1.4e-47 193.7 155 59.4
CARHR241300 Cardamine hirsuta HOM05D005951 ORTHO05D007025 3.3e-41 172.6 117 66.7
SalBow6G6500 Salvia bowleyana HOM05D005951 ORTHO05D007025 2.5e-36 156.4 97 77.3
Cre12.g515650 Chlamydomonas reinhardtii HOM05D005951 ORTHO05D007025 5.1e-34 148.7 189 38.1
PRCOL_00003879 Prasinoderma coloniale HOM05D005951 ORTHO05D007025 1.2e-19 100.9 205 30.2
MD02G1101200 Malus domestica HOM05D005951 ORTHO05D007025 6.3e-16 88.6 97 52.6
ATR0705G105 Amborella trichopoda HOM05D005951 ORTHO05D007025 4.2e-12 75.9 40 80.0
Ah.14g084710 Amaranthus hybridus HOM05D005951 ORTHO05D007025 9.1e-07 58.2 37 75.7


User provided reference genes

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