Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund26050 Selenicereus undatus HOM05D006658 ORTHO05D008515 6.2e-149 530.8 274 100.0
AUR62004779 Chenopodium quinoa HOM05D006658 ORTHO05D008515 2.5e-81 306.2 246 68.3
EL10Ac4g08937 Beta vulgaris HOM05D006658 ORTHO05D008515 3.3e-81 305.8 254 66.9
Sc13g0003830 Simmondsia chinensis HOM05D006658 ORTHO05D008515 1.9e-73 280.0 253 63.2
Rhsim02G0017700 Rhododendron simsii HOM05D006658 ORTHO05D008515 6.4e-69 265.0 247 58.7
TAR365G0289 Trochodendron aralioides HOM05D006658 ORTHO05D008515 1.1e-68 264.2 253 58.9
Cpa.g.sc16.52 Carica papaya HOM05D006658 ORTHO05D008515 1.4e-68 263.8 253 58.9
vmacro15292 Vaccinium macrocarpon HOM05D006658 ORTHO05D008515 4.1e-68 262.3 247 58.3
QL06p005937 Quercus lobata HOM05D006658 ORTHO05D008515 9.2e-68 261.2 252 57.5
Potri.008G199900 Populus trichocarpa HOM05D006658 ORTHO05D008515 1.6e-67 260.4 253 56.9
Sabra08G0161000 Salix brachista HOM05D006658 ORTHO05D008515 1.6e-67 260.4 266 55.3
Cfa015553 Carpinus fangiana HOM05D006658 ORTHO05D008515 2.7e-67 259.6 253 57.3
CSS0022396 Camellia sinensis var. sinensis HOM05D006658 ORTHO05D008515 3.5e-67 259.2 247 57.5
Haze_00994 Corylus avellana HOM05D006658 ORTHO05D008515 6.0e-67 258.5 253 57.3
Manes.15G021400 Manihot esculenta HOM05D006658 ORTHO05D008515 7.8e-67 258.1 253 58.1
Dinv38362 Davidia involucrata HOM05D006658 ORTHO05D008515 1.3e-66 257.3 253 58.1
CiPaw.02G090200 Carya illinoinensis HOM05D006658 ORTHO05D008515 2.3e-66 256.5 253 56.9
TWI53G0915 Tripterygium wilfordii HOM05D006658 ORTHO05D008515 5.1e-66 255.4 253 57.7
MBI17_g29609_MAGBIO Magnolia biondii HOM05D006658 ORTHO05D008515 6.6e-66 255.0 253 56.9
PSO407G0441 Papaver somniferum HOM05D006658 ORTHO05D008515 8.6e-66 254.6 253 56.1
PSO170G4721 Papaver somniferum HOM05D006658 ORTHO05D008515 1.5e-65 253.8 253 56.1
Atru.chr4.2671 Acer truncatum HOM05D006658 ORTHO05D008515 1.9e-65 253.4 253 56.9
Ciclev10005116m.g Citrus clementina HOM05D006658 ORTHO05D008515 2.5e-65 253.1 253 55.7
Eucgr.E03351 Eucalyptus grandis HOM05D006658 ORTHO05D008515 4.3e-65 252.3 253 54.9
HanXRQChr12g0359491 Helianthus annuus HOM05D006658 ORTHO05D008515 4.3e-65 252.3 253 56.5
MD13G1180000 Malus domestica HOM05D006658 ORTHO05D008515 4.3e-65 252.3 253 56.1
BcaC01g03498 Brassica carinata HOM05D006658 ORTHO05D008515 7.3e-65 251.5 253 57.3
Prupe.1G148500 Prunus persica HOM05D006658 ORTHO05D008515 7.3e-65 251.5 253 56.1
Actinidia00076 Actinidia chinensis HOM05D006658 ORTHO05D008515 1.2e-64 250.8 247 56.7
BcaB04g19174 Brassica carinata HOM05D006658 ORTHO05D008515 1.2e-64 250.8 253 57.3
Carub.0003s2162 Capsella rubella HOM05D006658 ORTHO05D008515 2.1e-64 250.0 253 56.9
FvH4_4g14170 Fragaria vesca HOM05D006658 ORTHO05D008515 2.8e-64 249.6 253 54.9
FAN12G0854 Fragaria x ananassa HOM05D006658 ORTHO05D008515 2.8e-64 249.6 253 54.9
Gohir.A09G200700 Gossypium hirsutum HOM05D006658 ORTHO05D008515 2.8e-64 249.6 253 56.1
A03p42320 Brassica napus HOM05D006658 ORTHO05D008515 3.6e-64 249.2 253 56.9
BraA03t13384Z Brassica rapa HOM05D006658 ORTHO05D008515 3.6e-64 249.2 253 56.9
Sp3g19610 Schrenkiella parvula HOM05D006658 ORTHO05D008515 3.6e-64 249.2 253 56.9
AL3G35700 Arabidopsis lyrata HOM05D006658 ORTHO05D008515 6.2e-64 248.4 253 56.5
AT3G21580 Arabidopsis thaliana HOM05D006658 ORTHO05D008515 6.2e-64 248.4 253 56.5
Aqoxy2G03225 Aquilegia oxysepala HOM05D006658 ORTHO05D008515 1.1e-63 247.7 253 56.5
Gorai.006G218300 Gossypium raimondii HOM05D006658 ORTHO05D008515 1.8e-63 246.9 253 55.7
CARHR097540 Cardamine hirsuta HOM05D006658 ORTHO05D008515 3.1e-63 246.1 253 56.5
Lsat_1_v5_gn_5_165480 Lactuca sativa HOM05D006658 ORTHO05D008515 4.0e-63 245.7 253 56.9
Gohir.D09G194900 Gossypium hirsutum HOM05D006658 ORTHO05D008515 5.2e-63 245.4 253 55.3
CANSAT78G1897 Cannabis sativa HOM05D006658 ORTHO05D008515 6.8e-63 245.0 253 56.9
RcHm_v2.0_Chr4g0419051 Rosa chinensis HOM05D006658 ORTHO05D008515 8.9e-63 244.6 253 54.2
BolC3t17462H Brassica oleracea HOM05D006658 ORTHO05D008515 1.2e-62 244.2 253 56.1
Aa31sc174G10 Aethionema arabicum HOM05D006658 ORTHO05D008515 1.5e-62 243.8 253 56.1
Nitab4.5_0003070g0030 Nicotiana tabacum HOM05D006658 ORTHO05D008515 2.0e-62 243.4 247 56.7
GSVIVG01017866001 Vitis vinifera HOM05D006658 ORTHO05D008515 2.0e-62 243.4 262 54.2
C03p51780 Brassica napus HOM05D006658 ORTHO05D008515 2.6e-62 243.0 253 55.7
FAN07G2752 Fragaria x ananassa HOM05D006658 ORTHO05D008515 2.6e-62 243.0 263 53.2
Lalb_Chr15g0087271 Lupinus albus HOM05D006658 ORTHO05D008515 2.6e-62 243.0 253 54.5
Thhalv10020897m.g Eutrema salsugineum HOM05D006658 ORTHO05D008515 5.8e-62 241.9 253 55.3
Cc03_g02920 Coffea canephora HOM05D006658 ORTHO05D008515 9.9e-62 241.1 253 55.3
MELO3C021391.2 Cucumis melo HOM05D006658 ORTHO05D008515 9.9e-62 241.1 244 54.9
Solyc01g080300.4 Solanum lycopersicum HOM05D006658 ORTHO05D008515 9.9e-62 241.1 246 56.1
Sopen01g032090 Solanum pennellii HOM05D006658 ORTHO05D008515 9.9e-62 241.1 246 56.1
PGSC0003DMG400004353 Solanum tuberosum HOM05D006658 ORTHO05D008515 9.9e-62 241.1 246 56.1
ClCG06G005690 Citrullus lanatus HOM05D006658 ORTHO05D008515 1.3e-61 240.7 244 54.5
CAN.G522.10 Capsicum annuum HOM05D006658 ORTHO05D008515 1.7e-61 240.4 246 56.5
Ah.06g191650 Amaranthus hybridus HOM05D006658 ORTHO05D008515 2.2e-61 240.0 159 78.0
PGR065G0004 Punica granatum HOM05D006658 ORTHO05D008515 2.9e-61 239.6 253 54.2
CsaV3_6G005460 Cucumis sativus L. HOM05D006658 ORTHO05D008515 1.1e-60 237.7 244 54.5
Thecc.04G218900 Theobroma cacao HOM05D006658 ORTHO05D008515 1.9e-60 236.9 252 54.4
Sed0019307 Sechium edule HOM05D006658 ORTHO05D008515 2.4e-60 236.5 244 54.5
THA.LOC104820222 Tarenaya hassleriana HOM05D006658 ORTHO05D008515 2.4e-60 236.5 253 53.8
ECA234G3592 Erigeron canadensis HOM05D006658 ORTHO05D008515 7.1e-60 235.0 226 58.4
FAN22G2256 Fragaria x ananassa HOM05D006658 ORTHO05D008515 9.2e-60 234.6 237 54.4
arahy.Tifrunner.gnm1.ann1.V9Y9T8 Arachis hypogaea HOM05D006658 ORTHO05D008515 1.6e-59 233.8 253 53.4
Peaxi162Scf00095g00723 Petunia axillaris HOM05D006658 ORTHO05D008515 1.6e-59 233.8 249 55.4
VMungo0540G0090 Vigna mungo HOM05D006658 ORTHO05D008515 2.1e-59 233.4 253 53.8
arahy.Tifrunner.gnm1.ann1.Q3CYV3 Arachis hypogaea HOM05D006658 ORTHO05D008515 2.7e-59 233.0 253 53.0
MSTRG.24762 Avicennia marina HOM05D006658 ORTHO05D008515 3.5e-59 232.6 241 55.2
HPP92_001401 Vanilla planifolia HOM05D006658 ORTHO05D008515 3.5e-59 232.6 253 53.4
AUR62003399 Chenopodium quinoa HOM05D006658 ORTHO05D008515 4.6e-59 232.3 252 56.7
Medtr2g021220 Medicago truncatula HOM05D006658 ORTHO05D008515 4.6e-59 232.3 253 52.2
Glyma.15G101900 Glycine max HOM05D006658 ORTHO05D008515 6.0e-59 231.9 253 53.4
Os05g0400600 Oryza sativa ssp. japonica HOM05D006658 ORTHO05D008515 1.0e-58 231.1 247 53.8
Phvul.006G155900 Phaseolus vulgaris HOM05D006658 ORTHO05D008515 1.0e-58 231.1 253 52.6
ATR0626G018 Amborella trichopoda HOM05D006658 ORTHO05D007095 1.3e-58 230.7 231 55.0
Ca_00605_v3 Cicer arietinum L. HOM05D000887 ORTHO05D000908 2.3e-58 229.9 253 51.4
Migut.N00139 Erythranthe guttata HOM05D006658 ORTHO05D008515 3.0e-58 229.6 246 53.3
COL.COLO4_21620 Corchorus olitorius HOM05D006658 ORTHO05D008515 3.9e-58 229.2 251 53.4
TPR.G28916 Trifolium pratense HOM05D000887 ORTHO05D000908 8.6e-58 228.0 253 52.2
DCAR_027140 Daucus carota HOM05D006658 ORTHO05D008515 1.1e-57 227.6 220 58.2
Lj6g0017983 Lotus japonicus HOM05D006658 ORTHO05D008515 5.6e-57 225.3 253 52.2
SEGI_40702 Sequoiadendron giganteum HOM05D006658 ORTHO05D008515 5.6e-57 225.3 246 50.4
CDE02G1914 Ceratophyllum demersum HOM05D006658 ORTHO05D008515 6.2e-56 221.9 253 51.8
SalBow5G3198 Salvia bowleyana HOM05D006658 ORTHO05D008515 1.1e-55 221.1 248 54.0
Zm00001eb346810 Zea mays HOM05D006658 ORTHO05D008515 1.1e-55 221.1 247 52.6
RcHm_v2.0_Chr5g0064291 Rosa chinensis HOM05D006658 ORTHO05D008515 5.2e-55 218.8 160 68.1
RcHm_v2.0_Chr2g0086241 Rosa chinensis HOM05D006658 ORTHO05D008515 6.9e-55 218.4 160 67.5
SGA_v2.0_scaffold107G30765 Striga asiatica HOM05D006658 ORTHO05D008515 1.2e-54 217.6 246 52.4
PGR004G0022 Punica granatum HOM05D006658 ORTHO05D008515 5.8e-54 215.3 171 64.3
Psat5g176560 Pisum sativum HOM05D006658 ORTHO05D008515 7.6e-54 214.9 268 47.8
CSS0004357 Camellia sinensis var. sinensis HOM05D006658 ORTHO05D008515 9.9e-54 214.5 150 72.0
Nn4g26153 Nelumbo nucifera HOM05D006658 ORTHO05D008515 7.1e-52 208.4 162 65.4
Duzib212G0844 Durio zibethinus HOM05D006658 ORTHO05D008515 9.3e-52 208.0 185 60.5
Nn1g02127 Nelumbo nucifera HOM05D006658 ORTHO05D008515 1.0e-50 204.5 159 64.8
CDE09G1086 Ceratophyllum demersum HOM05D002356 ORTHO05D002546 4.3e-49 199.1 161 62.7
Mapoly0015s0173 Marchantia polymorpha HOM05D006658 ORTHO05D008515 7.3e-49 198.4 247 46.6
Psat1g186040 Pisum sativum HOM05D006658 ORTHO05D008515 1.1e-47 194.5 194 53.1
Lj3A803G20 Lonicera japonica HOM05D006658 ORTHO05D008515 1.8e-47 193.7 133 70.7
Pp3c16_5660 Physcomitrium patens HOM05D006658 ORTHO05D008515 1.8e-47 193.7 237 45.6
SMO361G0230 Selaginella moellendorffii HOM05D006658 ORTHO05D008515 2.2e-45 186.8 249 43.8
Glyma.13G210900 Glycine max HOM05D006658 ORTHO05D008515 2.4e-44 183.3 142 64.1
Manes.07G121800 Manihot esculenta HOM05D006658 ORTHO05D008515 7.1e-44 181.8 136 70.6
RcHm_v2.0_Chr5g0045591 Rosa chinensis HOM05D006658 ORTHO05D008515 2.1e-43 180.3 148 62.8
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 1.3e-40 171.0 244 41.4
unitig_61.g26008 Utricularia gibba HOM05D006658 ORTHO05D008515 6.9e-39 165.2 245 42.0
MCO01G250 Micromonas commoda HOM05D006658 ORTHO05D008515 1.3e-29 134.4 233 35.6
Cre12.g533950 Chlamydomonas reinhardtii HOM05D006658 ORTHO05D008515 1.7e-29 134.0 149 47.7
SEGI_22040 Sequoiadendron giganteum HOM05D006658 ORTHO05D008515 6.5e-29 132.1 158 47.5
Peaxi162Scf00095g00724 Petunia axillaris HOM05D006658 ORTHO05D008515 2.1e-27 127.1 119 55.5
PRCOL_00004089 Prasinoderma coloniale HOM05D006658 ORTHO05D008515 5.1e-26 122.5 154 45.5
Actinidia32371 Actinidia chinensis HOM05D006658 ORTHO05D008515 2.6e-22 110.2 83 74.7
Actinidia08452 Actinidia chinensis HOM05D006658 ORTHO05D008515 2.9e-21 106.7 83 71.1
Oeu023652.1 Olea europaea HOM05D006658 ORTHO05D008515 5.5e-20 102.4 223 35.4
HanXRQChr09g0256171 Helianthus annuus HOM05D006658 ORTHO05D008515 6.9e-15 85.5 61 65.6
Nitab4.5_0000059g0030 Nicotiana tabacum HOM05D006658 ORTHO05D008979 2.9e-13 80.1 94 52.1
Psat2g070960 Pisum sativum HOM05D006658 ORTHO05D008515 1.4e-10 71.2 72 51.4
HPP92_001340 Vanilla planifolia HOM05D006658 ORTHO05D008515 3.9e-10 69.7 59 57.6
HanXRQChr04g0123631 Helianthus annuus HOM05D034347 ORTHO05D227534 4.5e-06 56.2 46 60.9


User provided reference genes

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