Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund26040 Selenicereus undatus HOM05D001316 ORTHO05D001113 2.3e-72 275.4 133 100.0
EL10Ac5g12822 Beta vulgaris HOM05D001316 ORTHO05D001113 2.0e-15 86.3 81 64.2
AUR62010731 Chenopodium quinoa HOM05D001316 ORTHO05D001113 1.3e-14 83.6 81 61.7
AUR62019740 Chenopodium quinoa HOM05D001316 ORTHO05D001113 1.3e-14 83.6 81 61.7
Hund11442 Selenicereus undatus HOM05D001316 ORTHO05D001113 6.3e-14 81.3 85 60.0
Ah.12g051840 Amaranthus hybridus HOM05D001316 ORTHO05D001113 2.7e-12 75.9 90 55.6
Manes.01G058200 Manihot esculenta HOM05D001316 ORTHO05D001113 1.7e-11 73.2 82 58.5
Prupe.5G105200 Prunus persica HOM05D001316 ORTHO05D001113 1.7e-11 73.2 85 52.9
PGR031G1080 Punica granatum HOM05D001316 ORTHO05D001113 2.9e-11 72.4 88 55.7
Potri.001G100100 Populus trichocarpa HOM05D001316 ORTHO05D001113 3.9e-11 72.0 81 56.8
vmacro11401 Vaccinium macrocarpon HOM05D001316 ORTHO05D001113 3.9e-11 72.0 85 58.8
Rhsim02G0234800 Rhododendron simsii HOM05D001316 ORTHO05D001113 5.0e-11 71.6 85 57.6
Manes.02G018200 Manihot esculenta HOM05D001316 ORTHO05D001113 6.6e-11 71.2 81 54.3
Duzib084G0684 Durio zibethinus HOM05D001316 ORTHO05D001113 1.1e-10 70.5 84 54.8
Dinv37607 Davidia involucrata HOM05D001316 ORTHO05D001113 1.5e-10 70.1 85 51.8
MD06G1089300 Malus domestica HOM05D001316 ORTHO05D001113 1.5e-10 70.1 87 52.9
GSVIVG01019404001 Vitis vinifera HOM05D001316 ORTHO05D001113 1.9e-10 69.7 82 57.3
BcaB03g11763 Brassica carinata HOM05D001316 ORTHO05D001113 2.5e-10 69.3 82 51.2
MD06G1158500 Malus domestica HOM05D001316 ORTHO05D001113 2.5e-10 69.3 87 54.0
Aa31LG6G6690 Aethionema arabicum HOM05D001316 ORTHO05D001113 3.3e-10 68.9 82 45.1
BcaC01g00816 Brassica carinata HOM05D001316 ORTHO05D001113 3.3e-10 68.9 81 53.1
C03p84690 Brassica napus HOM05D001316 ORTHO05D001113 3.3e-10 68.9 81 53.1
BolC3t20756H Brassica oleracea HOM05D001316 ORTHO05D001113 3.3e-10 68.9 81 53.1
Thhalv10027042m.g Eutrema salsugineum HOM05D001316 ORTHO05D001113 3.3e-10 68.9 81 48.1
Gorai.004G139000 Gossypium raimondii HOM05D001316 ORTHO05D001113 3.3e-10 68.9 87 51.7
Hma1.2p1_0216F.1_g090970 Hydrangea macrophylla HOM05D001316 ORTHO05D001113 5.6e-10 68.2 83 51.8
Oeu031425.1 Olea europaea HOM05D001316 ORTHO05D001113 5.6e-10 68.2 80 52.5
Sabra01G0075100 Salix brachista HOM05D001316 ORTHO05D001113 5.6e-10 68.2 81 53.1
A08p16160 Brassica napus HOM05D001316 ORTHO05D001113 7.3e-10 67.8 81 51.9
Cfa012189 Carpinus fangiana HOM05D001316 ORTHO05D001113 7.3e-10 67.8 81 51.9
Potri.003G131600 Populus trichocarpa HOM05D001316 ORTHO05D001113 7.3e-10 67.8 81 55.6
Thecc.03G285000 Theobroma cacao HOM05D001316 ORTHO05D001113 7.3e-10 67.8 84 53.6
TAR375G1106 Trochodendron aralioides HOM05D001316 ORTHO05D001113 7.3e-10 67.8 81 54.3
CARHR230830 Cardamine hirsuta HOM05D001316 ORTHO05D001113 9.5e-10 67.4 81 48.1
BcaNung01051 Brassica carinata HOM05D001316 ORTHO05D001113 1.2e-09 67.0 81 48.1
RcHm_v2.0_Chr7g0196801 Rosa chinensis HOM05D001316 ORTHO05D001113 1.2e-09 67.0 81 51.9
CiPaw.12G090200 Carya illinoinensis HOM05D001316 ORTHO05D001113 1.6e-09 66.6 86 50.0
Sopen08g029800 Solanum pennellii HOM05D001316 ORTHO05D001113 1.6e-09 66.6 80 50.0
AL7G29960 Arabidopsis lyrata HOM05D001316 ORTHO05D001113 2.8e-09 65.9 81 48.1
BraA01t01412Z Brassica rapa HOM05D001316 ORTHO05D001113 2.8e-09 65.9 81 46.9
BraA08t33586Z Brassica rapa HOM05D001316 ORTHO05D001113 2.8e-09 65.9 81 50.6
Gohir.D08G135800 Gossypium hirsutum HOM05D001316 ORTHO05D001113 2.8e-09 65.9 87 50.6
MD14G1110000 Malus domestica HOM05D001316 ORTHO05D001113 2.8e-09 65.9 87 51.7
Sabra03G0094000 Salix brachista HOM05D001316 ORTHO05D001113 2.8e-09 65.9 81 53.1
CSS0005737 Camellia sinensis var. sinensis HOM05D001316 ORTHO05D001113 3.6e-09 65.5 82 54.9
Ciclev10023365m.g Citrus clementina HOM05D001316 ORTHO05D001113 3.6e-09 65.5 81 53.1
Sp7g21390 Schrenkiella parvula HOM05D001316 ORTHO05D001113 3.6e-09 65.5 81 45.7
CsaV3_4G005890 Cucumis sativus L. HOM05D001316 ORTHO05D001113 4.7e-09 65.1 81 46.9
Sed0008731 Sechium edule HOM05D001316 ORTHO05D001113 4.7e-09 65.1 81 50.6
CiPaw.11G131100 Carya illinoinensis HOM05D001316 ORTHO05D001113 6.1e-09 64.7 82 47.6
Haze_08829 Corylus avellana HOM05D001316 ORTHO05D001113 8.0e-09 64.3 81 45.7
Duzib205G1298 Durio zibethinus HOM05D001316 ORTHO05D001113 8.0e-09 64.3 84 53.6
FAN04G1683 Fragaria x ananassa HOM05D001316 ORTHO05D001113 8.0e-09 64.3 81 48.1
FAN08G1705 Fragaria x ananassa HOM05D001316 ORTHO05D001113 8.0e-09 64.3 81 48.1
QL12p032007 Quercus lobata HOM05D001316 ORTHO05D001113 8.0e-09 64.3 89 50.6
Eucgr.D01822 Eucalyptus grandis HOM05D001316 ORTHO05D001113 1.4e-08 63.5 94 44.7
Solyc08g081470.3 Solanum lycopersicum HOM05D001316 ORTHO05D001113 1.4e-08 63.5 80 48.8
PGSC0003DMG400012325 Solanum tuberosum HOM05D001316 ORTHO05D001113 1.4e-08 63.5 80 48.8
TWI15G0013 Tripterygium wilfordii HOM05D001316 ORTHO05D001113 1.4e-08 63.5 84 51.2
MSTRG.13857 Avicennia marina HOM05D001316 ORTHO05D001113 1.8e-08 63.2 82 50.0
BcaC09g50991 Brassica carinata HOM05D001316 ORTHO05D001113 1.8e-08 63.2 81 45.7
C01p18230 Brassica napus HOM05D001316 ORTHO05D001113 1.8e-08 63.2 81 45.7
BolC1t01749H Brassica oleracea HOM05D001316 ORTHO05D001113 1.8e-08 63.2 81 45.7
ClCG07G008200 Citrullus lanatus HOM05D001316 ORTHO05D001113 1.8e-08 63.2 81 49.4
FvH4_5g03030 Fragaria vesca HOM05D001316 ORTHO05D001113 1.8e-08 63.2 84 48.8
FAN18G1802 Fragaria x ananassa HOM05D001316 ORTHO05D001113 1.8e-08 63.2 84 48.8
A01p14730 Brassica napus HOM05D001316 ORTHO05D001113 2.3e-08 62.8 81 45.7
Duzib068G0152 Durio zibethinus HOM05D001316 ORTHO05D001113 2.3e-08 62.8 84 52.4
MELO3C016359.2 Cucumis melo HOM05D001316 ORTHO05D001113 3.1e-08 62.4 82 47.6
Gohir.A12G234000 Gossypium hirsutum HOM05D001316 ORTHO05D001113 3.1e-08 62.4 84 51.2
Hma1.2p1_0216F.1_g090950 Hydrangea macrophylla HOM05D001316 ORTHO05D001113 3.1e-08 62.4 82 50.0
Prupe.5G105300 Prunus persica HOM05D001316 ORTHO05D001113 3.1e-08 62.4 85 45.9
THA.LOC104814684 Tarenaya hassleriana HOM05D001316 ORTHO05D001113 3.1e-08 62.4 81 46.9
FAN13G2819 Fragaria x ananassa HOM05D001316 ORTHO05D001113 4.0e-08 62.0 83 49.4
COL.COLO4_08376 Corchorus olitorius HOM05D001316 ORTHO05D001113 5.2e-08 61.6 88 48.9
Oeu049857.1 Olea europaea HOM05D001316 ORTHO05D001113 6.8e-08 61.2 81 49.4
AT4G23496 Arabidopsis thaliana HOM05D001316 ORTHO05D001113 8.9e-08 60.8 82 43.9
Carub.0007s1769 Capsella rubella HOM05D001316 ORTHO05D001113 8.9e-08 60.8 82 46.3
Dinv38908 Davidia involucrata HOM05D001316 ORTHO05D001113 1.2e-07 60.5 83 48.2
Gohir.D12G233300 Gossypium hirsutum HOM05D001316 ORTHO05D001113 1.2e-07 60.5 84 50.0
Gorai.008G249700 Gossypium raimondii HOM05D001316 ORTHO05D001113 1.2e-07 60.5 84 50.0
Sc01g0009760 Simmondsia chinensis HOM05D001316 ORTHO05D001113 1.2e-07 60.5 89 47.2
CAN.G532.21 Capsicum annuum HOM05D001316 ORTHO05D001113 1.5e-07 60.1 79 45.6
THA.LOC104806421 Tarenaya hassleriana HOM05D001316 ORTHO05D001113 1.5e-07 60.1 81 49.4
BolC2t08684H Brassica oleracea HOM05D001316 ORTHO05D001113 2.0e-07 59.7 91 41.8
BraA02t06634Z Brassica rapa HOM05D001316 ORTHO05D001113 2.6e-07 59.3 91 41.8
MBI04_g39323_MAGBIO Magnolia biondii HOM05D000910 ORTHO05D000852 2.6e-07 59.3 82 48.8
Cpa.g.sc180.27 Carica papaya HOM05D001316 ORTHO05D001113 3.4e-07 58.9 85 49.4
C02p26180 Brassica napus HOM05D001316 ORTHO05D001113 5.8e-07 58.2 90 41.1
Migut.A00752 Erythranthe guttata HOM05D001316 ORTHO05D001113 5.8e-07 58.2 93 43.0
A02p15730 Brassica napus HOM05D001316 ORTHO05D001113 7.5e-07 57.8 90 41.1
MBI11_g37071_MAGBIO Magnolia biondii HOM05D001316 ORTHO05D001113 7.5e-07 57.8 85 45.9
EL10Ac6g15012 Beta vulgaris HOM05D001316 ORTHO05D001113 1.3e-06 57.0 83 42.2
Hund25169 Selenicereus undatus HOM05D001316 ORTHO05D001113 1.3e-06 57.0 89 41.6
Manes.06G152300 Manihot esculenta HOM05D001316 ORTHO05D001113 1.7e-06 56.6 86 47.7
Carub.0002s1582 Capsella rubella HOM05D001316 ORTHO05D001113 2.2e-06 56.2 86 45.3
Sabra10G0119500 Salix brachista HOM05D001316 ORTHO05D001113 2.2e-06 56.2 87 44.8
Cc08_g15130 Coffea canephora HOM05D001316 ORTHO05D001113 2.9e-06 55.8 83 44.6
SGA_v2.0_scaffold236G43775 Striga asiatica HOM05D001316 ORTHO05D001113 2.9e-06 55.8 94 41.5
GSVIVG01008116001 Vitis vinifera HOM05D001316 ORTHO05D001113 2.9e-06 55.8 85 43.5
HanXRQChr03g0085951 Helianthus annuus HOM05D001316 ORTHO05D001113 3.7e-06 55.5 89 43.8
Nitab4.5_0009044g0030 Nicotiana tabacum HOM05D001316 ORTHO05D001113 3.7e-06 55.5 82 43.9
Sp1g22340 Schrenkiella parvula HOM05D001316 ORTHO05D001113 3.7e-06 55.5 93 41.9
AUR62003088 Chenopodium quinoa HOM05D001316 ORTHO05D001113 4.9e-06 55.1 86 41.9
AUR62007905 Chenopodium quinoa HOM05D001316 ORTHO05D001113 4.9e-06 55.1 86 41.9
PGR102G0948 Punica granatum HOM05D001316 ORTHO05D001113 4.9e-06 55.1 83 43.4
Aqoxy3G03666 Aquilegia oxysepala HOM05D001316 ORTHO05D001113 6.4e-06 54.7 93 43.0
AL2G28320 Arabidopsis lyrata HOM05D001316 ORTHO05D001113 6.4e-06 54.7 85 45.9
Potri.010G157600 Populus trichocarpa HOM05D001316 ORTHO05D001113 6.4e-06 54.7 87 44.8
THA.LOC104802978 Tarenaya hassleriana HOM05D001316 ORTHO05D001113 6.4e-06 54.7 81 44.4
Cpa.g.sc1.138 Carica papaya HOM05D001316 ORTHO05D001113 8.3e-06 54.3 89 41.6
Nitab4.5_0005596g0030 Nicotiana tabacum HOM05D001316 ORTHO05D001113 8.3e-06 54.3 82 43.9
Peaxi162Scf00074g01825 Petunia axillaris HOM05D001316 ORTHO05D001113 8.3e-06 54.3 81 46.9
THA.LOC104808527 Tarenaya hassleriana HOM05D001316 ORTHO05D001113 8.3e-06 54.3 83 41.0


User provided reference genes

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