Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund25843 Selenicereus undatus HOM05D005623 ORTHO05D007130 3.9e-47 191.0 91 100.0
EL10Ac8g19268 Beta vulgaris HOM05D005623 ORTHO05D007130 9.7e-22 106.7 66 74.2
Ah.14g086080 Amaranthus hybridus HOM05D005623 ORTHO05D007130 2.2e-21 105.5 59 81.4
COL.COLO4_18232 Corchorus olitorius HOM05D005623 ORTHO05D007130 1.8e-20 102.4 64 75.0
Sc14g0000790 Simmondsia chinensis HOM05D005623 ORTHO05D007130 4.1e-20 101.3 66 71.2
AUR62031248 Chenopodium quinoa HOM05D005623 ORTHO05D007130 2.0e-19 99.0 65 69.2
Zm00001eb239790 Zea mays HOM05D005623 ORTHO05D007130 7.6e-19 97.1 64 71.9
Rhsim05G0035400 Rhododendron simsii HOM05D005623 ORTHO05D007130 1.0e-18 96.7 61 73.8
Thecc.09G093300 Theobroma cacao HOM05D005623 ORTHO05D007130 1.0e-18 96.7 64 70.3
Actinidia25269 Actinidia chinensis HOM05D005623 ORTHO05D007130 1.3e-18 96.3 62 71.0
Nn8g38917 Nelumbo nucifera HOM05D005623 ORTHO05D007130 2.9e-18 95.1 63 68.3
Sabra06G0118200 Salix brachista HOM05D005623 ORTHO05D007130 3.8e-18 94.7 59 72.9
Gorai.010G081300 Gossypium raimondii HOM05D005623 ORTHO05D007130 5.0e-18 94.4 66 69.7
Nitab4.5_0007297g0030 Nicotiana tabacum HOM05D005623 ORTHO05D007130 5.0e-18 94.4 69 65.2
vmacro10811 Vaccinium macrocarpon HOM05D005623 ORTHO05D007130 5.0e-18 94.4 64 67.2
Lj4A313G21 Lonicera japonica HOM05D005623 ORTHO05D007130 6.5e-18 94.0 66 66.7
Gohir.A06G071000 Gossypium hirsutum HOM05D005623 ORTHO05D007130 8.5e-18 93.6 66 69.7
Nitab4.5_0000713g0170 Nicotiana tabacum HOM05D005623 ORTHO05D007130 8.5e-18 93.6 66 65.2
Os02g0224400 Oryza sativa ssp. japonica HOM05D005623 ORTHO05D007130 8.5e-18 93.6 57 75.4
TAR624G0131 Trochodendron aralioides HOM05D005623 ORTHO05D007130 8.5e-18 93.6 55 72.7
HPP92_000613 Vanilla planifolia HOM05D005623 ORTHO05D007130 8.5e-18 93.6 61 68.9
Cc06_g11060 Coffea canephora HOM05D005623 ORTHO05D007130 1.1e-17 93.2 59 72.9
Duzib187G0326 Durio zibethinus HOM05D005623 ORTHO05D007130 1.1e-17 93.2 66 69.7
Potri.006G149500 Populus trichocarpa HOM05D005623 ORTHO05D007130 1.1e-17 93.2 59 71.2
Sp7g27360 Schrenkiella parvula HOM05D005623 ORTHO05D007130 1.1e-17 93.2 59 72.9
BcaC09g51737 Brassica carinata HOM05D005623 ORTHO05D007130 1.4e-17 92.8 59 71.2
C01p09970 Brassica napus HOM05D005623 ORTHO05D007130 1.4e-17 92.8 59 71.2
BolC1t00959H Brassica oleracea HOM05D005623 ORTHO05D007130 1.4e-17 92.8 59 71.2
DCAR_024065 Daucus carota HOM05D005623 ORTHO05D007130 1.4e-17 92.8 66 66.7
Dinv42293 Davidia involucrata HOM05D005623 ORTHO05D007130 1.4e-17 92.8 64 65.6
A01p08540 Brassica napus HOM05D005623 ORTHO05D007130 1.9e-17 92.4 59 72.9
BraA01t00803Z Brassica rapa HOM05D005623 ORTHO05D007130 1.9e-17 92.4 59 72.9
Manes.16G104200 Manihot esculenta HOM05D005623 ORTHO05D007130 2.5e-17 92.0 63 65.1
Gohir.D06G069700 Gossypium hirsutum HOM05D005623 ORTHO05D007130 3.2e-17 91.7 66 68.2
Atru.chr7.1542 Acer truncatum HOM05D005623 ORTHO05D007130 4.2e-17 91.3 59 67.8
MBI04_g11706_MAGBIO Magnolia biondii HOM05D005623 ORTHO05D007130 5.5e-17 90.9 59 67.8
Peaxi162Scf00264g00083 Petunia axillaris HOM05D005623 ORTHO05D007130 5.5e-17 90.9 62 62.9
THA.LOC104814603 Tarenaya hassleriana HOM05D005623 ORTHO05D007130 5.5e-17 90.9 59 69.5
Sopen07g014810 Solanum pennellii HOM05D005623 ORTHO05D007130 1.6e-16 89.4 64 64.1
CSS0001651 Camellia sinensis var. sinensis HOM05D005623 ORTHO05D007130 2.1e-16 89.0 57 66.7
Ciclev10007793m.g Citrus clementina HOM05D005623 ORTHO05D007130 2.1e-16 89.0 64 62.5
GSVIVG01015237001 Vitis vinifera HOM05D005623 ORTHO05D007130 2.1e-16 89.0 59 71.2
Carub.0007s1105 Capsella rubella HOM05D005623 ORTHO05D007130 2.7e-16 88.6 59 67.8
Solyc07g026960.3 Solanum lycopersicum HOM05D005623 ORTHO05D007130 2.7e-16 88.6 64 62.5
Migut.J00444 Erythranthe guttata HOM05D005623 ORTHO05D007130 3.6e-16 88.2 63 61.9
SalBow6G5356 Salvia bowleyana HOM05D005623 ORTHO05D007130 6.1e-16 87.4 60 65.0
vmacro00758 Vaccinium macrocarpon HOM05D005623 ORTHO05D007130 6.1e-16 87.4 64 65.6
MD15G1203700 Malus domestica HOM05D005623 ORTHO05D007130 7.9e-16 87.0 63 63.5
AUR62027454 Chenopodium quinoa HOM05D005623 ORTHO05D007130 1.0e-15 86.7 65 63.1
TWI34G0204 Tripterygium wilfordii HOM05D005623 ORTHO05D007130 1.0e-15 86.7 59 64.4
CARHR237320 Cardamine hirsuta HOM05D005623 ORTHO05D007130 1.4e-15 86.3 59 64.4
ClCG03G015820 Citrullus lanatus HOM05D005623 ORTHO05D007130 1.4e-15 86.3 63 58.7
CsaV3_1G040190 Cucumis sativus L. HOM05D005623 ORTHO05D007130 1.4e-15 86.3 60 63.3
CsaV3_UNG058470 Cucumis sativus L. HOM05D005623 ORTHO05D007130 1.4e-15 86.3 60 63.3
PSO210G1449 Papaver somniferum HOM05D005623 ORTHO05D007130 1.4e-15 86.3 62 62.9
Ca_17399_v3 Cicer arietinum L. HOM05D005623 ORTHO05D007130 1.8e-15 85.9 68 57.4
MSTRG.6040 Avicennia marina HOM05D005623 ORTHO05D007130 2.3e-15 85.5 59 66.1
MELO3C015446.2 Cucumis melo HOM05D005623 ORTHO05D007130 2.3e-15 85.5 63 58.7
SGA_v2.0_scaffold10G05202 Striga asiatica HOM05D005623 ORTHO05D007130 2.3e-15 85.5 63 63.5
Thhalv10025013m.g Eutrema salsugineum HOM05D005623 ORTHO05D007130 3.0e-15 85.1 59 67.8
AT4G29490 Arabidopsis thaliana HOM05D005623 ORTHO05D007130 3.9e-15 84.7 59 64.4
HanXRQChr10g0319101 Helianthus annuus HOM05D005623 ORTHO05D007130 3.9e-15 84.7 55 69.1
CiPaw.04G152100 Carya illinoinensis HOM05D005623 ORTHO05D007130 6.7e-15 84.0 66 60.6
Sed0005617 Sechium edule HOM05D005623 ORTHO05D007130 8.8e-15 83.6 59 62.7
Prupe.7G213700 Prunus persica HOM05D005623 ORTHO05D007130 1.1e-14 83.2 59 62.7
SEGI_10063 Sequoiadendron giganteum HOM05D005623 ORTHO05D007130 1.1e-14 83.2 59 64.4
Aa31LG2G20980 Aethionema arabicum HOM05D005623 ORTHO05D007130 1.5e-14 82.8 59 62.7
AL7G22900 Arabidopsis lyrata HOM05D005623 ORTHO05D007130 1.5e-14 82.8 59 62.7
ECA234G3237 Erigeron canadensis HOM05D005623 ORTHO05D007130 1.5e-14 82.8 62 61.3
VMungo0251G2698 Vigna mungo HOM05D005623 ORTHO05D007130 1.5e-14 82.8 59 66.1
Lalb_Chr05g0223571 Lupinus albus HOM05D005623 ORTHO05D007130 1.9e-14 82.4 59 66.1
PGR102G2538 Punica granatum HOM05D005623 ORTHO05D007130 2.5e-14 82.0 65 58.5
unitig_26.g9166 Utricularia gibba HOM05D005623 ORTHO05D007130 2.5e-14 82.0 62 61.3
Eucgr.C03666 Eucalyptus grandis HOM05D005623 ORTHO05D007130 3.3e-14 81.6 65 60.0
Lsat_1_v5_gn_5_145881 Lactuca sativa HOM05D005623 ORTHO05D007130 4.3e-14 81.3 55 67.3
Phvul.002G304900 Phaseolus vulgaris HOM05D005623 ORTHO05D007130 4.3e-14 81.3 59 62.7
PSO210G3522 Papaver somniferum HOM05D005623 ORTHO05D007130 5.7e-14 80.9 55 63.6
Psat7g019600 Pisum sativum HOM05D005623 ORTHO05D007130 7.4e-14 80.5 59 64.4
RcHm_v2.0_Chr2g0092921 Rosa chinensis HOM05D005623 ORTHO05D007130 1.3e-13 79.7 59 59.3
Medtr8g101730 Medicago truncatula HOM05D005623 ORTHO05D007130 1.7e-13 79.3 59 61.0
CANSAT56G1243 Cannabis sativa HOM05D005623 ORTHO05D007130 2.2e-13 79.0 63 58.7
Lalb_Chr16g0390941 Lupinus albus HOM05D005623 ORTHO05D007130 2.2e-13 79.0 62 59.7
ATR0789G174 Amborella trichopoda HOM05D005623 ORTHO05D007130 2.8e-13 78.6 56 60.7
FAN19G1723 Fragaria x ananassa HOM05D005623 ORTHO05D007130 2.8e-13 78.6 59 57.6
FAN28G0299 Fragaria x ananassa HOM05D005623 ORTHO05D007130 2.8e-13 78.6 59 57.6
FvH4_1g06970 Fragaria vesca HOM05D005623 ORTHO05D007130 3.7e-13 78.2 59 57.6
FAN26G2999 Fragaria x ananassa HOM05D005623 ORTHO05D007130 3.7e-13 78.2 59 57.6
FAN23G2436 Fragaria x ananassa HOM05D005623 ORTHO05D007130 4.8e-13 77.8 64 53.1
FAN26G0941 Fragaria x ananassa HOM05D005623 ORTHO05D007130 4.8e-13 77.8 64 53.1
QL02p063259 Quercus lobata HOM05D005623 ORTHO05D007130 8.2e-13 77.0 59 61.0
arahy.Tifrunner.gnm1.ann1.G7AZGE Arachis hypogaea HOM05D005623 ORTHO05D007130 1.8e-12 75.9 59 61.0
Lj4g0010059 Lotus japonicus HOM05D005623 ORTHO05D007130 4.1e-12 74.7 59 61.0
TPR.G25466 Trifolium pratense HOM05D005623 ORTHO05D007130 6.9e-12 73.9 59 57.6
Glyma.05G222900 Glycine max HOM05D005623 ORTHO05D007130 9.1e-12 73.6 54 63.0
Nn1g05571 Nelumbo nucifera HOM05D005623 ORTHO05D007130 1.5e-11 72.8 55 60.0
Haze_25882 Corylus avellana HOM05D005623 ORTHO05D007130 3.4e-11 71.6 66 57.6
Pp3c22_16460 Physcomitrium patens HOM05D005623 ORTHO05D007130 1.9e-09 65.9 53 52.8
Mapoly0025s0122 Marchantia polymorpha HOM05D005623 ORTHO05D007130 5.5e-09 64.3 52 50.0
Eucgr.C03941 Eucalyptus grandis HOM05D005623 ORTHO05D007130 1.2e-08 63.2 57 50.9
AagrBONN_evm.TU.Sc2ySwM_117.2163 Anthoceros agrestis HOM05D005623 ORTHO05D007130 4.7e-08 61.2 62 48.4
CBR_g19773 Chara braunii HOM05D005623 ORTHO05D007130 1.1e-06 56.6 53 52.8


User provided reference genes

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