Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund25815 Selenicereus undatus HOM05D006665 ORTHO05D008327 1.3e-157 559.7 285 100.0
AUR62039464 Chenopodium quinoa HOM05D006665 ORTHO05D008327 3.5e-62 242.7 192 66.7
EL10Ac8g20571 Beta vulgaris HOM05D006665 ORTHO05D008327 3.3e-60 236.1 190 65.3
Ah.14g087040 Amaranthus hybridus HOM05D006665 ORTHO05D008327 4.8e-59 232.3 190 64.2
Dinv32346 Davidia involucrata HOM05D006665 ORTHO05D008327 5.8e-57 225.3 196 58.7
QL05p048519 Quercus lobata HOM05D006665 ORTHO05D008327 5.8e-57 225.3 179 63.1
AUR62027710 Chenopodium quinoa HOM05D006665 ORTHO05D008327 1.3e-56 224.2 178 65.2
Sc05g0006960 Simmondsia chinensis HOM05D006665 ORTHO05D008327 2.2e-56 223.4 177 63.8
Cfa000642 Carpinus fangiana HOM05D006665 ORTHO05D008327 3.8e-56 222.6 180 61.1
Haze_06187 Corylus avellana HOM05D006665 ORTHO05D008327 4.2e-55 219.2 173 61.8
Atru.chr10.1584 Acer truncatum HOM05D006665 ORTHO05D008327 5.5e-55 218.8 182 62.6
Potri.011G069700 Populus trichocarpa HOM05D006665 ORTHO05D008327 2.1e-54 216.9 180 62.2
Aqoxy4G00257 Aquilegia oxysepala HOM05D006665 ORTHO05D008327 4.6e-54 215.7 186 58.1
CiPaw.09G072200 Carya illinoinensis HOM05D006665 ORTHO05D008327 7.9e-54 214.9 180 60.0
FvH4_1g07520 Fragaria vesca HOM05D006665 ORTHO05D008327 1.8e-53 213.8 180 60.6
FAN19G1242 Fragaria x ananassa HOM05D006665 ORTHO05D008327 1.8e-53 213.8 180 60.6
FAN26G1216 Fragaria x ananassa HOM05D006665 ORTHO05D008327 1.8e-53 213.8 180 60.6
CSS0008142 Camellia sinensis var. sinensis HOM05D006665 ORTHO05D008327 6.7e-53 211.8 177 59.3
Ciclev10015641m.g Citrus clementina HOM05D006665 ORTHO05D008327 6.7e-53 211.8 198 57.6
MBI07_g09544_MAGBIO Magnolia biondii HOM05D006665 ORTHO05D008327 6.7e-53 211.8 190 58.9
MSTRG.7424 Avicennia marina HOM05D006665 ORTHO05D008327 8.7e-53 211.5 181 59.1
FAN23G0824 Fragaria x ananassa HOM05D006665 ORTHO05D008327 8.7e-53 211.5 180 60.6
FAN26G0384 Fragaria x ananassa HOM05D006665 ORTHO05D008327 1.1e-52 211.1 180 59.4
TAR627G0088 Trochodendron aralioides HOM05D006665 ORTHO05D008327 1.1e-52 211.1 181 62.4
vmacro16044 Vaccinium macrocarpon HOM05D006665 ORTHO05D008327 1.5e-52 210.7 181 59.1
PGSC0003DMG400028425 Solanum tuberosum HOM05D006665 ORTHO05D008327 5.6e-52 208.8 189 58.2
CANSAT80G2447 Cannabis sativa HOM05D000074 ORTHO05D000220 9.6e-52 208.0 181 58.0
PSO170G0566 Papaver somniferum HOM05D000074 ORTHO05D000220 1.3e-51 207.6 183 59.0
Solyc02g072230.3 Solanum lycopersicum HOM05D006665 ORTHO05D008327 1.3e-51 207.6 181 59.7
Sopen02g021210 Solanum pennellii HOM05D006665 ORTHO05D008327 1.3e-51 207.6 181 59.7
Sabra11G0053800 Salix brachista HOM05D006665 ORTHO05D008327 2.1e-51 206.8 180 60.6
RcHm_v2.0_Chr5g0011451 Rosa chinensis HOM05D006665 ORTHO05D008327 4.8e-51 205.7 180 60.0
HanXRQChr15g0480791 Helianthus annuus HOM05D006665 ORTHO05D008327 8.2e-51 204.9 181 58.6
Peaxi162Scf00371g00319 Petunia axillaris HOM05D006665 ORTHO05D008327 1.1e-50 204.5 184 57.6
PGR042G0915 Punica granatum HOM05D006665 ORTHO05D008327 1.1e-50 204.5 180 58.3
Rhsim02G0145600 Rhododendron simsii HOM05D006665 ORTHO05D008327 1.1e-50 204.5 192 56.2
Nn3g21119 Nelumbo nucifera HOM05D006665 ORTHO05D008327 1.8e-50 203.8 181 58.6
Lj2C318T4 Lonicera japonica HOM05D006665 ORTHO05D008327 4.0e-50 202.6 179 58.1
Prupe.4G065800 Prunus persica HOM05D006665 ORTHO05D008327 5.3e-50 202.2 180 57.2
Lalb_Chr13g0295211 Lupinus albus HOM05D006665 ORTHO05D008327 9.0e-50 201.4 182 59.9
Nitab4.5_0000437g0180 Nicotiana tabacum HOM05D006665 ORTHO05D008327 9.0e-50 201.4 181 60.2
DCAR_005186 Daucus carota HOM05D006665 ORTHO05D008327 1.2e-49 201.1 210 49.5
Gorai.011G037800 Gossypium raimondii HOM05D006665 ORTHO05D008327 2.0e-49 200.3 181 55.8
Cc02_g15490 Coffea canephora HOM05D006665 ORTHO05D008327 2.6e-49 199.9 181 56.4
Gohir.A10G035200 Gossypium hirsutum HOM05D006665 ORTHO05D008327 3.4e-49 199.5 181 55.8
Thecc.06G166800 Theobroma cacao HOM05D006665 ORTHO05D008327 3.4e-49 199.5 180 56.7
Gohir.D10G035900 Gossypium hirsutum HOM05D006665 ORTHO05D008327 5.8e-49 198.7 181 55.8
GSVIVG01021249001 Vitis vinifera HOM05D006665 ORTHO05D008327 5.8e-49 198.7 187 57.8
Nitab4.5_0008526g0030 Nicotiana tabacum HOM05D006665 ORTHO05D008327 1.0e-48 198.0 181 59.1
COL.COLO4_31251 Corchorus olitorius HOM05D006665 ORTHO05D008327 1.7e-48 197.2 182 56.6
Lsat_1_v5_gn_7_25921 Lactuca sativa HOM05D006665 ORTHO05D008327 2.2e-48 196.8 188 56.4
Sed0010934 Sechium edule HOM05D006665 ORTHO05D008327 2.9e-48 196.4 181 55.2
MD05G1296500 Malus domestica HOM05D006665 ORTHO05D008327 3.8e-48 196.1 183 55.2
TWI73G0293 Tripterygium wilfordii HOM05D006665 ORTHO05D008327 3.8e-48 196.1 179 58.1
Duzib235G0558 Durio zibethinus HOM05D006665 ORTHO05D008327 8.4e-48 194.9 181 55.2
THA.LOC104812882 Tarenaya hassleriana HOM05D006665 ORTHO05D008327 1.9e-47 193.7 198 51.0
arahy.Tifrunner.gnm1.ann1.L41MS4 Arachis hypogaea HOM05D006665 ORTHO05D008327 9.3e-47 191.4 181 57.5
CsaV3_1G033140 Cucumis sativus L. HOM05D006665 ORTHO05D008327 1.6e-46 190.7 181 52.5
ECA236G1698 Erigeron canadensis HOM05D000074 ORTHO05D000220 2.7e-46 189.9 174 56.3
Manes.17G058400 Manihot esculenta HOM05D006665 ORTHO05D008327 3.5e-46 189.5 178 56.2
Aa31LG9G7310 Aethionema arabicum HOM05D006665 ORTHO05D008327 1.3e-45 187.6 180 55.0
SalBow8G2667 Salvia bowleyana HOM05D000074 ORTHO05D000220 1.8e-45 187.2 180 55.6
Eucgr.E04353 Eucalyptus grandis HOM05D006665 ORTHO05D008327 3.9e-45 186.0 184 53.3
Eucgr.E02766 Eucalyptus grandis HOM05D006665 ORTHO05D008327 5.1e-45 185.7 184 52.7
ClCG03G007500 Citrullus lanatus HOM05D000074 ORTHO05D000220 2.5e-44 183.3 177 51.4
Os01g0205100 Oryza sativa ssp. japonica HOM05D006665 ORTHO05D008327 2.5e-44 183.3 178 52.8
arahy.Tifrunner.gnm1.ann1.UF726L Arachis hypogaea HOM05D006665 ORTHO05D008327 5.7e-44 182.2 175 57.1
Migut.M01013 Erythranthe guttata HOM05D006665 ORTHO05D008327 5.7e-44 182.2 189 51.9
Medtr8g086605 Medicago truncatula HOM05D006665 ORTHO05D008327 1.6e-43 180.6 183 53.0
ATR0012G051 Amborella trichopoda HOM05D006665 ORTHO05D008327 2.8e-43 179.9 180 54.4
TPR.G6756 Trifolium pratense HOM05D006665 ORTHO05D008327 3.7e-43 179.5 182 52.2
AT5G45760 Arabidopsis thaliana HOM05D006665 ORTHO05D008327 1.8e-42 177.2 181 50.8
CARHR176220 Cardamine hirsuta HOM05D006665 ORTHO05D008327 3.1e-42 176.4 180 51.7
AL8G12850 Arabidopsis lyrata HOM05D006665 ORTHO05D008327 5.3e-42 175.6 187 50.8
Phvul.002G240300 Phaseolus vulgaris HOM05D006665 ORTHO05D008327 1.2e-41 174.5 185 53.0
VMungo0251G1318 Vigna mungo HOM05D006665 ORTHO05D008327 2.0e-41 173.7 185 52.4
Thhalv10000923m.g Eutrema salsugineum HOM05D006665 ORTHO05D008327 2.6e-41 173.3 194 49.5
Sp2g10670 Schrenkiella parvula HOM05D006665 ORTHO05D008327 4.5e-41 172.6 186 48.4
A09p21920 Brassica napus HOM05D006665 ORTHO05D008327 1.3e-40 171.0 177 50.8
Carub.0008s0223 Capsella rubella HOM05D006665 ORTHO05D008327 1.7e-40 170.6 181 50.8
C09p28090 Brassica napus HOM05D006665 ORTHO05D008327 2.9e-40 169.9 177 52.0
Glyma.08G117600 Glycine max HOM05D006665 ORTHO05D008327 2.9e-40 169.9 182 52.2
BolC9t55679H Brassica oleracea HOM05D006665 ORTHO05D008327 6.5e-40 168.7 177 51.4
Glyma.05G160032 Glycine max HOM05D006665 ORTHO05D008327 6.5e-40 168.7 184 52.2
Lj4g0005276 Lotus japonicus HOM05D000074 ORTHO05D008327 1.4e-39 167.5 177 53.7
Sabra11G0057300 Salix brachista HOM05D000074 ORTHO05D000220 1.4e-37 161.0 155 55.5
BcaB07g30869 Brassica carinata HOM05D006665 ORTHO05D008327 1.8e-37 160.6 178 47.8
BraA09t37795Z Brassica rapa HOM05D006665 ORTHO05D008327 5.7e-36 155.6 168 49.4
BcaC04g21745 Brassica carinata HOM05D006665 ORTHO05D008327 9.7e-36 154.8 169 50.3
SEGI_17628 Sequoiadendron giganteum HOM05D006665 ORTHO05D008327 2.2e-35 153.7 194 43.3
Hma1.2p1_0113F.1_g055090 Hydrangea macrophylla HOM05D006665 ORTHO05D008327 5.3e-34 149.1 182 49.5
Hma1.2p1_0113F.1_g055096 Hydrangea macrophylla HOM05D006665 ORTHO05D008327 5.3e-34 149.1 182 49.5
Oeu043117.1 Olea europaea HOM05D006665 ORTHO05D008327 1.2e-33 147.9 149 56.4
Psat2g000080 Pisum sativum HOM05D006665 ORTHO05D008327 3.6e-30 136.3 141 49.6
CDE06G0006 Ceratophyllum demersum HOM05D006665 ORTHO05D008327 1.5e-28 131.0 165 47.3
Dinv12760 Davidia involucrata HOM05D006665 ORTHO05D008327 9.7e-28 128.3 169 45.0
Psat7g069040 Pisum sativum HOM05D006665 ORTHO05D008327 2.6e-25 120.2 156 46.2
Pp3c18_2320 Physcomitrium patens HOM05D006665 ORTHO05D008327 9.4e-23 111.7 188 37.8
SMO118G0425 Selaginella moellendorffii HOM05D006665 ORTHO05D008327 6.1e-22 109.0 177 33.3
Mapoly0020s0147 Marchantia polymorpha HOM05D006665 ORTHO05D008327 1.4e-21 107.8 179 36.9
Hund08404 Selenicereus undatus HOM05D022429 ORTHO05D008327 4.1e-18 96.3 56 91.1
Hund30075 Selenicereus undatus HOM05D008634 ORTHO05D000695 3.5e-17 93.2 56 83.9
Hund22696 Selenicereus undatus HOM05D008634 ORTHO05D008327 1.2e-14 84.7 51 90.2
CBR_g34019 Chara braunii HOM05D006665 ORTHO05D008327 8.0e-14 82.0 216 31.5
Sabra04G0038600 Salix brachista HOM05D000074 ORTHO05D000220 2.3e-13 80.5 113 45.1
FAN25G1258 Fragaria x ananassa HOM05D006665 ORTHO05D008327 3.0e-13 80.1 66 59.1
Hund25888 Selenicereus undatus HOM05D008634 ORTHO05D000695 4.0e-13 79.7 52 82.7
FAN11G1287 Fragaria x ananassa HOM05D006665 ORTHO05D008327 6.8e-13 79.0 179 35.2
FvH4_3g07410 Fragaria vesca HOM05D006665 ORTHO05D008327 2.6e-12 77.0 162 36.4
BcaB06g27285 Brassica carinata HOM05D006665 ORTHO05D008327 3.1e-10 70.1 60 55.0
AagrBONN_evm.TU.Sc2ySwM_117.2766 Anthoceros agrestis HOM05D006665 ORTHO05D008327 9.1e-10 68.6 129 35.7
BcaB04g18653 Brassica carinata HOM05D006665 ORTHO05D008327 1.2e-09 68.2 44 68.2
Actinidia07650 Actinidia chinensis HOM05D006665 ORTHO05D008327 1.6e-09 67.8 51 58.8
Hund04165 Selenicereus undatus HOM05D008634 ORTHO05D008327 2.1e-06 57.4 33 93.9
Zm00001eb120830 Zea mays HOM05D006665 ORTHO05D008327 2.1e-06 57.4 110 34.5


User provided reference genes

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