Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund25693 Selenicereus undatus HOM05D007454 ORTHO05D009382 7.3e-89 330.5 161 100.0
EL10Ac2g02557 Beta vulgaris HOM05D007454 ORTHO05D009382 7.1e-36 154.5 164 52.4
Cfa013203 Carpinus fangiana HOM05D007454 ORTHO05D009382 5.7e-25 118.2 159 44.7
FAN20G1122 Fragaria x ananassa HOM05D007454 ORTHO05D009382 1.8e-23 113.2 158 44.9
FAN27G1093 Fragaria x ananassa HOM05D007454 ORTHO05D009382 2.4e-23 112.8 158 44.9
FAN15G1931 Fragaria x ananassa HOM05D007454 ORTHO05D009382 4.1e-23 112.1 158 45.6
FvH4_2g29860 Fragaria vesca HOM05D007454 ORTHO05D009382 5.3e-23 111.7 158 44.3
RcHm_v2.0_Chr6g0298931 Rosa chinensis HOM05D007454 ORTHO05D009382 9.1e-23 110.9 158 43.0
FAN24G1693 Fragaria x ananassa HOM05D007454 ORTHO05D009382 1.5e-22 110.2 158 43.7
Haze_21608 Corylus avellana HOM05D007454 ORTHO05D009382 5.0e-21 105.1 159 43.4
Gohir.A11G304800 Gossypium hirsutum HOM05D007454 ORTHO05D009382 8.5e-21 104.4 162 42.0
Manes.03G018900 Manihot esculenta HOM05D007454 ORTHO05D009382 8.5e-21 104.4 164 43.3
QL12p031592 Quercus lobata HOM05D007454 ORTHO05D009382 8.5e-21 104.4 161 42.2
CiPaw.08G014500 Carya illinoinensis HOM05D007454 ORTHO05D009382 1.4e-20 103.6 166 45.2
Eucgr.C01807 Eucalyptus grandis HOM05D007454 ORTHO05D009382 1.9e-20 103.2 168 44.0
MD15G1117600 Malus domestica HOM05D007454 ORTHO05D009382 2.5e-20 102.8 157 45.2
TWI34G0809 Tripterygium wilfordii HOM05D007454 ORTHO05D009382 2.1e-19 99.8 162 39.5
Gorai.007G350400 Gossypium raimondii HOM05D007454 ORTHO05D009382 2.7e-19 99.4 162 40.1
Potri.006G248300 Populus trichocarpa HOM05D007454 ORTHO05D009382 2.7e-19 99.4 118 48.3
Thecc.09G146500 Theobroma cacao HOM05D007454 ORTHO05D009382 3.6e-19 99.0 165 40.6
Manes.16G117700 Manihot esculenta HOM05D007454 ORTHO05D009382 6.1e-19 98.2 168 41.7
TAR383G0100 Trochodendron aralioides HOM05D007454 ORTHO05D009382 7.9e-19 97.8 163 44.8
Atru.chr7.2345 Acer truncatum HOM05D007454 ORTHO05D009382 1.0e-18 97.4 161 37.3
Rhsim02G0189300 Rhododendron simsii HOM05D007454 ORTHO05D009382 1.0e-18 97.4 162 43.2
Sabra06G0194300 Salix brachista HOM05D007454 ORTHO05D009382 1.0e-18 97.4 162 40.7
Duzib150G0674 Durio zibethinus HOM05D007454 ORTHO05D009382 1.4e-18 97.1 120 46.7
Gohir.D11G320200 Gossypium hirsutum HOM05D007454 ORTHO05D009382 1.8e-18 96.7 161 40.4
CSS0001844 Camellia sinensis var. sinensis HOM05D007454 ORTHO05D009382 2.3e-18 96.3 162 38.9
COL.COLO4_24027 Corchorus olitorius HOM05D007454 ORTHO05D009382 5.1e-18 95.1 162 38.9
arahy.Tifrunner.gnm1.ann1.AC8RV3 Arachis hypogaea HOM05D007454 ORTHO05D009382 6.7e-18 94.7 164 40.9
Actinidia29311 Actinidia chinensis HOM05D007454 ORTHO05D009382 8.8e-18 94.4 162 39.5
Prupe.1G471000 Prunus persica HOM05D007454 ORTHO05D009382 1.1e-17 94.0 157 43.3
Actinidia13275 Actinidia chinensis HOM05D007454 ORTHO05D009382 2.0e-17 93.2 161 39.1
Cc11_g01380 Coffea canephora HOM05D007454 ORTHO05D009382 2.0e-17 93.2 164 37.8
Dinv11595 Davidia involucrata HOM05D007454 ORTHO05D009382 3.3e-17 92.4 118 45.8
arahy.Tifrunner.gnm1.ann1.X4UCF1 Arachis hypogaea HOM05D007454 ORTHO05D009382 7.4e-17 91.3 164 40.2
MD08G1140700 Malus domestica HOM05D007454 ORTHO05D009382 7.4e-17 91.3 158 41.1
HanXRQChr01g0030031 Helianthus annuus HOM05D007454 ORTHO05D009382 9.7e-17 90.9 165 37.0
Phvul.009G096400 Phaseolus vulgaris HOM05D007454 ORTHO05D009382 1.3e-16 90.5 156 37.2
Lsat_1_v5_gn_1_45380 Lactuca sativa HOM05D007454 ORTHO05D009382 2.2e-16 89.7 163 37.4
Ciclev10009811m.g Citrus clementina HOM05D007454 ORTHO05D009382 2.8e-16 89.4 129 41.9
Migut.A00288 Erythranthe guttata HOM05D007454 ORTHO05D009382 2.8e-16 89.4 159 36.5
ECA248G0251 Erigeron canadensis HOM05D007454 ORTHO05D009382 6.3e-16 88.2 164 36.6
CAN.G506.13 Capsicum annuum HOM05D007454 ORTHO05D009382 1.1e-15 87.4 163 39.3
CiPaw.07G219000 Carya illinoinensis HOM05D007454 ORTHO05D009382 1.1e-15 87.4 167 38.9
DCAR_001472 Daucus carota HOM05D007454 ORTHO05D009382 4.1e-15 85.5 138 39.9
PSO170G5517 Papaver somniferum HOM05D007454 ORTHO05D009382 4.1e-15 85.5 132 36.4
Glyma.06G072000 Glycine max HOM05D007454 ORTHO05D009382 9.1e-15 84.3 150 39.3
PSO017G6963 Papaver somniferum HOM05D007454 ORTHO05D009382 1.2e-14 84.0 163 33.7
Solyc08g067630.3 Solanum lycopersicum HOM05D007454 ORTHO05D009382 1.2e-14 84.0 164 37.8
PGSC0003DMG400002261 Solanum tuberosum HOM05D007454 ORTHO05D009382 1.2e-14 84.0 120 44.2
unitig_748.g8205 Utricularia gibba HOM05D007454 ORTHO05D009382 1.2e-14 84.0 123 40.7
Nitab4.5_0003201g0010 Nicotiana tabacum HOM05D007454 ORTHO05D009382 1.5e-14 83.6 162 43.2
Sed0003243 Sechium edule HOM05D007454 ORTHO05D009382 1.5e-14 83.6 169 33.1
Lj1g0018180 Lotus japonicus HOM05D007454 ORTHO05D009382 3.4e-14 82.4 165 38.8
Nn2g11862 Nelumbo nucifera HOM05D007454 ORTHO05D009382 3.4e-14 82.4 171 33.9
Nitab4.5_0000125g0360 Nicotiana tabacum HOM05D007454 ORTHO05D009382 3.4e-14 82.4 162 40.7
Aqoxy7G01923 Aquilegia oxysepala HOM05D007454 ORTHO05D009382 5.9e-14 81.6 153 37.3
TAR626G1515 Trochodendron aralioides HOM05D007454 ORTHO05D009382 5.9e-14 81.6 164 39.6
Oeu032495.1 Olea europaea HOM05D007454 ORTHO05D009382 7.7e-14 81.3 161 36.6
Cpa.g.sc603.1 Carica papaya HOM05D007454 ORTHO05D009382 1.0e-13 80.9 162 35.8
Glyma.04G070000 Glycine max HOM05D007454 ORTHO05D009382 2.9e-13 79.3 156 37.8
SalBow4G3079 Salvia bowleyana HOM05D007454 ORTHO05D009382 3.8e-13 79.0 66 60.6
Sc09g0008740 Simmondsia chinensis HOM05D007454 ORTHO05D009382 3.8e-13 79.0 164 34.1
VMungo1309G0733 Vigna mungo HOM05D007454 ORTHO05D009382 6.5e-13 78.2 124 38.7
BraA04t17571Z Brassica rapa HOM05D007454 ORTHO05D009382 1.4e-12 77.0 156 34.0
Ca_15708_v3 Cicer arietinum L. HOM05D007454 ORTHO05D009382 1.4e-12 77.0 173 35.3
Thhalv10000347m.g Eutrema salsugineum HOM05D007454 ORTHO05D009382 1.4e-12 77.0 167 34.1
AL4G17110 Arabidopsis lyrata HOM05D007454 ORTHO05D009382 2.5e-12 76.3 164 34.8
BcaB06g28081 Brassica carinata HOM05D007454 ORTHO05D009382 2.5e-12 76.3 159 33.3
A04p19830 Brassica napus HOM05D007454 ORTHO05D009382 2.5e-12 76.3 159 33.3
Medtr3g107890 Medicago truncatula HOM05D007454 ORTHO05D009382 2.5e-12 76.3 174 37.9
Carub.0004s0541 Capsella rubella HOM05D007454 ORTHO05D009382 3.2e-12 75.9 118 39.8
THA.LOC104803822 Tarenaya hassleriana HOM05D007454 ORTHO05D009382 3.2e-12 75.9 67 53.7
TPR.G27330 Trifolium pratense HOM05D007454 ORTHO05D009382 4.2e-12 75.5 183 34.4
Sopen08g021580 Solanum pennellii HOM05D007454 ORTHO05D009382 7.2e-12 74.7 112 42.9
AT2G25625 Arabidopsis thaliana HOM05D007454 ORTHO05D009382 2.1e-11 73.2 156 34.6
Sp4g05200 Schrenkiella parvula HOM05D007454 ORTHO05D009382 2.7e-11 72.8 156 34.6
BcaC02g08336 Brassica carinata HOM05D007454 ORTHO05D009382 3.6e-11 72.4 159 32.7
C04p55570 Brassica napus HOM05D007454 ORTHO05D009382 3.6e-11 72.4 159 32.7
BolC4t27081H Brassica oleracea HOM05D007454 ORTHO05D009382 3.6e-11 72.4 159 32.7
ClCG08G012990 Citrullus lanatus HOM05D007454 ORTHO05D009382 8.0e-11 71.2 164 34.8
CARHR115660 Cardamine hirsuta HOM05D007454 ORTHO05D009382 1.0e-10 70.9 112 37.5
ClCG05G017140 Citrullus lanatus HOM05D007454 ORTHO05D009382 3.0e-10 69.3 147 33.3
CsaV3_2G031720 Cucumis sativus L. HOM05D007454 ORTHO05D009382 3.9e-10 68.9 134 35.8
Sed0012550 Sechium edule HOM05D007454 ORTHO05D009382 5.2e-10 68.6 147 34.7
MELO3C011223.2 Cucumis melo HOM05D007454 ORTHO05D009382 8.8e-10 67.8 63 52.4
MELO3C003676.2 Cucumis melo HOM05D007454 ORTHO05D009382 1.5e-09 67.0 161 34.8
Lalb_Chr23g0268861 Lupinus albus HOM05D007454 ORTHO05D009382 1.5e-09 67.0 167 34.7
Psat5g027000 Pisum sativum HOM05D007454 ORTHO05D009382 1.5e-09 67.0 67 52.2
CANSAT11G0218 Cannabis sativa HOM05D007454 ORTHO05D009382 2.6e-09 66.2 167 32.3
Aa31LG1G8530 Aethionema arabicum HOM05D007454 ORTHO05D009382 3.3e-09 65.9 118 36.4
ATR0083G010 Amborella trichopoda HOM05D007454 ORTHO05D009382 7.4e-09 64.7 125 34.4
ATR0260G001 Amborella trichopoda HOM05D007454 ORTHO05D009382 7.4e-09 64.7 125 34.4
Zm00001eb296620 Zea mays HOM05D007454 ORTHO05D009382 9.7e-09 64.3 74 48.6
CDE07G1568 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 1.3e-08 63.9 66 53.0
CsaV3_3G046620 Cucumis sativus L. HOM05D007454 ORTHO05D009382 4.8e-08 62.0 137 37.2
Os05g0575000 Oryza sativa ssp. japonica HOM05D007454 ORTHO05D009382 7.0e-07 58.2 39 56.4
TPR.G34694 Trifolium pratense HOM05D007454 ORTHO05D009382 1.6e-06 57.0 163 32.5
Sed0011711 Sechium edule HOM05D007454 ORTHO05D009382 5.9e-06 55.1 65 43.1
CDE06G2386 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 7.7e-06 54.7 132 31.8


User provided reference genes

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