Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund25565 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.4e-36 155.6 72 100.0
Hund01216 Selenicereus undatus HOM05D000445 ORTHO05D000314 6.5e-21 103.6 63 77.8
Hund08796 Selenicereus undatus HOM05D000445 ORTHO05D000314 6.5e-21 103.6 63 77.8
Hund10280 Selenicereus undatus HOM05D000445 ORTHO05D000314 6.5e-21 103.6 63 77.8
Hund11510 Selenicereus undatus HOM05D000445 ORTHO05D000314 6.5e-21 103.6 63 77.8
Hund19325 Selenicereus undatus HOM05D000445 ORTHO05D000314 6.5e-21 103.6 63 77.8
Hund26851 Selenicereus undatus HOM05D000445 ORTHO05D000314 6.5e-21 103.6 63 77.8
Hund26897 Selenicereus undatus HOM05D000445 ORTHO05D000314 6.5e-21 103.6 63 77.8
Hund27472 Selenicereus undatus HOM05D000445 ORTHO05D000314 6.5e-21 103.6 63 77.8
Hund28591 Selenicereus undatus HOM05D000445 ORTHO05D000314 6.5e-21 103.6 63 77.8
Hund28646 Selenicereus undatus HOM05D000445 ORTHO05D000314 6.5e-21 103.6 63 77.8
Hund28772 Selenicereus undatus HOM05D000445 ORTHO05D000314 6.5e-21 103.6 63 77.8
Hund29402 Selenicereus undatus HOM05D000445 ORTHO05D000314 6.5e-21 103.6 63 77.8
Hund29423 Selenicereus undatus HOM05D000445 ORTHO05D000314 6.5e-21 103.6 63 77.8
Hund29661 Selenicereus undatus HOM05D000445 ORTHO05D000314 6.5e-21 103.6 63 77.8
Hund29851 Selenicereus undatus HOM05D000445 ORTHO05D000314 6.5e-21 103.6 63 77.8
Sed0009579 Sechium edule HOM05D000445 ORTHO05D000314 4.2e-20 100.9 63 74.6
RcHm_v2.0_CPg0501801 Rosa chinensis HOM05D000445 ORTHO05D000314 7.1e-20 100.1 63 73.0
RcHm_v2.0_CPg0502611 Rosa chinensis HOM05D000445 ORTHO05D000314 7.1e-20 100.1 63 73.0
Sc05g0004090 Simmondsia chinensis HOM05D000445 ORTHO05D000314 4.6e-19 97.4 63 73.0
Nn269s46007 Nelumbo nucifera HOM05D000445 ORTHO05D000314 6.1e-19 97.1 63 73.0
Nn3g16153 Nelumbo nucifera HOM05D000445 ORTHO05D000314 6.1e-19 97.1 63 73.0
PGR111G0085 Punica granatum HOM05D000445 ORTHO05D000314 6.1e-19 97.1 63 71.4
PGR111G0100 Punica granatum HOM05D000445 ORTHO05D000314 6.1e-19 97.1 63 71.4
Hma1.2p1_0192F.1_g083690 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 1.0e-18 96.3 63 71.4
CAN.G1298.13 Capsicum annuum HOM05D000445 ORTHO05D000314 1.8e-18 95.5 63 71.4
CAN.G210.9 Capsicum annuum HOM05D000445 ORTHO05D000314 1.8e-18 95.5 63 71.4
Migut.O00730 Erythranthe guttata HOM05D000445 ORTHO05D000314 1.8e-18 95.5 63 71.4
Nitab4.5_0005100g0090 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.8e-18 95.5 63 71.4
Solyc00g500037.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.8e-18 95.5 63 71.4
Solyc00g500046.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.8e-18 95.5 63 71.4
Solyc00g500081.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.8e-18 95.5 63 71.4
Solyc00g500128.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.8e-18 95.5 63 71.4
Solyc00g500198.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.8e-18 95.5 63 71.4
Solyc00g500327.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.8e-18 95.5 63 71.4
Solyc03g120370.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.8e-18 95.5 63 71.4
PGSC0003DMG400015060 Solanum tuberosum HOM05D000445 ORTHO05D000314 1.8e-18 95.5 63 71.4
Potri.013G143400 Populus trichocarpa HOM05D000445 ORTHO05D000314 2.3e-18 95.1 63 68.3
SabraPtG0004600 Salix brachista HOM05D000445 ORTHO05D000314 2.3e-18 95.1 63 68.3
SabraPtG0006900 Salix brachista HOM05D000445 ORTHO05D000314 2.3e-18 95.1 63 68.3
Aqoxy169s001 Aquilegia oxysepala HOM05D000445 ORTHO05D000314 3.0e-18 94.7 63 69.8
Aqoxy3G01862 Aquilegia oxysepala HOM05D000445 ORTHO05D000314 3.0e-18 94.7 63 69.8
Nitab4.5_0007104g0070 Nicotiana tabacum HOM05D000445 ORTHO05D000314 5.1e-18 94.0 63 66.7
SalBow1G2507 Salvia bowleyana HOM05D000445 ORTHO05D000314 5.1e-18 94.0 63 69.8
Gohir.A04G039060 Gossypium hirsutum HOM05D000445 ORTHO05D000314 8.7e-18 93.2 63 69.8
Nn3g16494 Nelumbo nucifera HOM05D000445 ORTHO05D000314 8.7e-18 93.2 63 68.3
Peaxi162Scf00211g00218 Petunia axillaris HOM05D000445 ORTHO05D000314 8.7e-18 93.2 63 69.8
ATR0258G003 Amborella trichopoda HOM05D000445 ORTHO05D000314 1.1e-17 92.8 63 69.8
TAR383G0379 Trochodendron aralioides HOM05D000445 ORTHO05D000314 1.5e-17 92.4 66 69.7
CsaV3_UNG209000 Cucumis sativus L. HOM05D000445 ORTHO05D000314 2.5e-17 91.7 58 75.9
Lj2C1238G15 Lonicera japonica HOM05D000445 ORTHO05D000314 2.5e-17 91.7 63 68.3
EL10As18g24166 Beta vulgaris HOM05D000445 ORTHO05D000314 3.3e-17 91.3 54 81.5
Nitab4.5_0020349g0020 Nicotiana tabacum HOM05D000445 ORTHO05D000314 4.3e-17 90.9 59 74.6
unitig_91.g26489 Utricularia gibba HOM05D000445 ORTHO05D000314 4.3e-17 90.9 63 68.3
unitig_91.g26515 Utricularia gibba HOM05D000445 ORTHO05D000314 4.3e-17 90.9 63 68.3
unitig_91.g26530 Utricularia gibba HOM05D000445 ORTHO05D000314 4.3e-17 90.9 63 68.3
Solyc09g031820.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 5.7e-17 90.5 63 66.7
SGA_v2.0_scaffold2596G54158 Striga asiatica HOM05D000445 ORTHO05D000314 1.6e-16 89.0 59 69.5
ATCG00860 Arabidopsis thaliana HOM05D000445 ORTHO05D000314 2.8e-16 88.2 61 70.5
ATCG01280 Arabidopsis thaliana HOM05D000445 ORTHO05D000314 2.8e-16 88.2 61 70.5
C06p21350 Brassica napus HOM05D000445 ORTHO05D000314 2.8e-16 88.2 61 70.5
BolSC29t60535H Brassica oleracea HOM05D000445 ORTHO05D000314 2.8e-16 88.2 61 70.5
BolSC29t60563H Brassica oleracea HOM05D000445 ORTHO05D000314 2.8e-16 88.2 61 70.5
BraSC103t45415Z Brassica rapa HOM05D000445 ORTHO05D000314 2.8e-16 88.2 61 70.5
BraSC103t45439Z Brassica rapa HOM05D000445 ORTHO05D000314 2.8e-16 88.2 61 70.5
BraSC143t45672Z Brassica rapa HOM05D000445 ORTHO05D000314 2.8e-16 88.2 61 70.5
CARHR282560 Cardamine hirsuta HOM05D000445 ORTHO05D000314 2.8e-16 88.2 61 70.5
AL2G20470 Arabidopsis lyrata HOM05D000445 ORTHO05D000314 3.7e-16 87.8 61 70.5
Gorai.002G166000 Gossypium raimondii HOM05D000445 ORTHO05D000314 3.7e-16 87.8 63 66.7
BcaB02g11358 Brassica carinata HOM05D000445 ORTHO05D000314 8.2e-16 86.7 61 68.9
Thhalv10001808m.g Eutrema salsugineum HOM05D000445 ORTHO05D000314 8.2e-16 86.7 61 68.9
HanXRQChr00c0165g0572211 Helianthus annuus HOM05D000445 ORTHO05D000314 8.2e-16 86.7 59 69.5
HanXRQChr00c0394g0574511 Helianthus annuus HOM05D000445 ORTHO05D000314 8.2e-16 86.7 59 69.5
HanXRQChr00c0451g0574821 Helianthus annuus HOM05D000445 ORTHO05D000314 8.2e-16 86.7 59 69.5
HanXRQChr00c0454g0574911 Helianthus annuus HOM05D000445 ORTHO05D000314 8.2e-16 86.7 59 69.5
HanXRQChr00c0524g0575411 Helianthus annuus HOM05D000445 ORTHO05D000314 8.2e-16 86.7 59 69.5
HanXRQChr01g0020161 Helianthus annuus HOM05D000445 ORTHO05D000314 8.2e-16 86.7 59 69.5
HanXRQChr04g0127431 Helianthus annuus HOM05D000445 ORTHO05D000314 8.2e-16 86.7 59 69.5
HanXRQChr05g0152501 Helianthus annuus HOM05D000445 ORTHO05D000314 8.2e-16 86.7 59 69.5
HanXRQChr11g0321171 Helianthus annuus HOM05D000445 ORTHO05D000314 8.2e-16 86.7 59 69.5
HanXRQChr11g0327091 Helianthus annuus HOM05D000445 ORTHO05D000314 8.2e-16 86.7 59 69.5
HanXRQChr11g0336111 Helianthus annuus HOM05D000445 ORTHO05D000314 8.2e-16 86.7 59 69.5
HanXRQChr11g0336131 Helianthus annuus HOM05D000445 ORTHO05D000314 8.2e-16 86.7 59 69.5
HanXRQChr12g0369911 Helianthus annuus HOM05D000445 ORTHO05D000314 8.2e-16 86.7 59 69.5
HanXRQChr15g0474951 Helianthus annuus HOM05D000445 ORTHO05D000314 8.2e-16 86.7 59 69.5
HanXRQCPg0580251 Helianthus annuus HOM05D000445 ORTHO05D000314 8.2e-16 86.7 59 69.5
HanXRQCPg0580471 Helianthus annuus HOM05D000445 ORTHO05D000314 8.2e-16 86.7 59 69.5
Lsat_1_v5_gn_3_13441 Lactuca sativa HOM05D000445 ORTHO05D000314 1.4e-15 85.9 59 67.8
Lsat_1_v5_gn_8_26500 Lactuca sativa HOM05D000445 ORTHO05D000314 1.4e-15 85.9 59 67.8
Lsat_1_v5_gn_9_85820 Lactuca sativa HOM05D000445 ORTHO05D000314 1.4e-15 85.9 59 67.8
Nitab4.5_0000011g0360 Nicotiana tabacum HOM05D000445 ORTHO05D000314 4.1e-15 84.3 63 63.5
HanXRQChr00c0788g0577401 Helianthus annuus HOM05D000445 ORTHO05D000314 5.3e-15 84.0 55 72.7
BolSC29t60617H Brassica oleracea HOM05D000445 ORTHO05D000314 6.9e-15 83.6 60 66.7
Carub.0026s0005 Capsella rubella HOM05D000445 ORTHO05D000314 6.9e-15 83.6 60 66.7
C09p24760 Brassica napus HOM05D000445 ORTHO05D000314 9.0e-15 83.2 61 65.6
HanXRQChr00c0392g0574461 Helianthus annuus HOM05D000445 ORTHO05D000314 9.0e-15 83.2 58 67.2
Lalb_Chr01g0014991 Lupinus albus HOM05D000445 ORTHO05D000314 1.2e-14 82.8 63 68.3
Solyc02g011940.3 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.5e-14 82.4 64 60.9
VMungo0942G0001 Vigna mungo HOM05D000445 ORTHO05D000314 5.9e-14 80.5 63 63.5
VMungo0976G0001 Vigna mungo HOM05D000445 ORTHO05D000314 5.9e-14 80.5 63 63.5
arahy.Tifrunner.gnm1.ann1.Z1U5RE Arachis hypogaea HOM05D000445 ORTHO05D000314 2.2e-13 78.6 63 60.3
PSO548G0004 Papaver somniferum HOM05D000445 ORTHO05D000314 2.9e-13 78.2 59 67.8
PSO548G0115 Papaver somniferum HOM05D000445 ORTHO05D000314 2.9e-13 78.2 59 67.8
Nn020s41481 Nelumbo nucifera HOM05D000445 ORTHO05D000314 5.0e-13 77.4 49 73.5
DCAR_032529 Daucus carota HOM05D000445 ORTHO05D000314 6.5e-13 77.0 53 69.8
DCAR_032547 Daucus carota HOM05D000445 ORTHO05D000314 6.5e-13 77.0 53 69.8
arahy.Tifrunner.gnm1.ann1.QI67VD Arachis hypogaea HOM05D000445 ORTHO05D000314 8.5e-13 76.6 63 58.7
arahy.Tifrunner.gnm1.ann1.U896IL Arachis hypogaea HOM05D000445 ORTHO05D000314 8.5e-13 76.6 63 58.7
RcHm_v2.0_Chr2g0118451 Rosa chinensis HOM05D000445 ORTHO05D000314 8.5e-13 76.6 47 72.3
arahy.Tifrunner.gnm1.ann1.FTZ997 Arachis hypogaea HOM05D000445 ORTHO05D000314 5.5e-12 73.9 63 57.1
Lj4g0020232 Lotus japonicus HOM05D000445 ORTHO05D000314 2.7e-11 71.6 58 62.1
EL10Ac9g20995 Beta vulgaris HOM05D000445 ORTHO05D000314 3.6e-11 71.2 41 78.0
LjContig00318g0009654 Lotus japonicus HOM05D000445 ORTHO05D000314 4.6e-11 70.9 58 62.1
LjContig00318g0022366 Lotus japonicus HOM05D000445 ORTHO05D000314 4.6e-11 70.9 58 62.1
LjContig00319g0026737 Lotus japonicus HOM05D000445 ORTHO05D000314 4.6e-11 70.9 58 62.1
Gohir.D01G101865 Gossypium hirsutum HOM05D000445 ORTHO05D000314 3.9e-10 67.8 39 79.5
HanXRQChr13g0416601 Helianthus annuus HOM05D000445 ORTHO05D000314 4.3e-09 64.3 58 55.2
HanXRQChr00c0434g0574681 Helianthus annuus HOM05D000445 ORTHO05D000314 5.7e-09 63.9 45 66.7
HanXRQChr10g0284471 Helianthus annuus HOM05D000445 ORTHO05D000314 5.7e-09 63.9 45 66.7
Medtr4g047930 Medicago truncatula HOM05D000445 ORTHO05D000314 1.3e-08 62.8 59 54.2
Gohir.A12G088950 Gossypium hirsutum HOM05D000445 ORTHO05D000314 1.7e-08 62.4 40 75.0
BolSC47t61072H Brassica oleracea HOM05D000445 ORTHO05D000314 2.2e-08 62.0 45 68.9
BolSC49t61211H Brassica oleracea HOM05D000445 ORTHO05D000314 2.2e-08 62.0 45 68.9
BraSC143t45643Z Brassica rapa HOM05D000445 ORTHO05D000314 2.2e-08 62.0 45 68.9
BraSC59t46524Z Brassica rapa HOM05D000445 ORTHO05D000314 2.2e-08 62.0 45 68.9
Nitab4.5_0002616g0070 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.8e-08 61.6 54 57.4
HanXRQChr11g0333821 Helianthus annuus HOM05D000445 ORTHO05D000314 6.3e-08 60.5 44 63.6
AL1G45010 Arabidopsis lyrata HOM05D000445 ORTHO05D000314 8.2e-08 60.1 39 74.4
Hund11176 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.1e-07 59.7 31 87.1
Nn029s41592 Nelumbo nucifera HOM05D000445 ORTHO05D000314 2.4e-07 58.5 34 79.4
arahy.Tifrunner.gnm1.ann1.A0N0CH Arachis hypogaea HOM05D000445 ORTHO05D000314 1.5e-06 55.8 63 49.2
TPR.G10646 Trifolium pratense HOM05D000445 ORTHO05D000314 4.5e-06 54.3 53 52.8
Migut.K01186 Erythranthe guttata HOM05D000445 ORTHO05D000314 7.7e-06 53.5 34 73.5


User provided reference genes

Program Settings