Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund25564 Selenicereus undatus HOM05D005034 ORTHO05D006234 9.6e-107 390.2 200 100.0
PGR111G0056 Punica granatum HOM05D005034 ORTHO05D006234 4.0e-44 182.2 249 47.8
Gohir.1Z049831 Gossypium hirsutum HOM05D005034 ORTHO05D006234 9.8e-43 177.6 250 48.4
Gohir.A02G134200 Gossypium hirsutum HOM05D005034 ORTHO05D006234 9.8e-43 177.6 250 48.4
PSO548G0041 Papaver somniferum HOM05D005034 ORTHO05D006234 9.8e-43 177.6 251 48.2
Nn064s42213 Nelumbo nucifera HOM05D005034 ORTHO05D006234 2.4e-41 172.9 248 47.2
Nn212s45210 Nelumbo nucifera HOM05D005034 ORTHO05D006234 2.4e-41 172.9 248 47.2
Gohir.A10G117233 Gossypium hirsutum HOM05D005034 ORTHO05D006234 3.1e-41 172.6 250 47.2
CSS0025903 Camellia sinensis var. sinensis HOM05D005034 ORTHO05D006234 5.4e-41 171.8 251 47.4
HanXRQChr02g0059701 Helianthus annuus HOM05D005034 ORTHO05D006234 7.0e-41 171.4 250 48.8
HanXRQChr05g0152421 Helianthus annuus HOM05D005034 ORTHO05D006234 7.0e-41 171.4 250 48.8
HanXRQChr06g0182991 Helianthus annuus HOM05D005034 ORTHO05D006234 7.0e-41 171.4 250 48.8
HanXRQChr13g0413491 Helianthus annuus HOM05D005034 ORTHO05D006234 7.0e-41 171.4 250 48.8
HanXRQCPg0580361 Helianthus annuus HOM05D005034 ORTHO05D006234 7.0e-41 171.4 250 48.8
Lj2P1238T83 Lonicera japonica HOM05D005034 ORTHO05D006234 4.5e-40 168.7 249 45.8
MBI10_g47591_MAGBIO Magnolia biondii HOM05D005034 ORTHO05D006234 1.3e-39 167.2 204 51.5
Gohir.D01G134300 Gossypium hirsutum HOM05D005034 ORTHO05D006234 1.6e-37 160.2 250 45.6
LjContig00318g0021446 Lotus japonicus HOM05D005034 ORTHO05D006234 4.7e-37 158.7 253 44.7
LjContig00319g0026028 Lotus japonicus HOM05D005034 ORTHO05D006234 4.7e-37 158.7 253 44.7
Medtr4g006130 Medicago truncatula HOM05D005034 ORTHO05D006234 4.7e-37 158.7 253 44.7
Lalb_Chr07g0191731 Lupinus albus HOM05D005034 ORTHO05D006234 6.1e-37 158.3 217 51.6
Sed0006489 Sechium edule HOM05D005034 ORTHO05D006234 1.8e-36 156.8 238 44.5
Sed0013321 Sechium edule HOM05D005034 ORTHO05D006234 8.9e-36 154.5 236 47.0
arahy.Tifrunner.gnm1.ann1.ZFUC3L Arachis hypogaea HOM05D005034 ORTHO05D006234 1.7e-34 150.2 253 43.5
CAN.G1045.13 Capsicum annuum HOM05D005034 ORTHO05D006234 2.9e-34 149.4 249 44.6
CAN.G134.8 Capsicum annuum HOM05D005034 ORTHO05D006234 2.9e-34 149.4 249 44.6
CAN.G1526.4 Capsicum annuum HOM05D005034 ORTHO05D006234 2.9e-34 149.4 249 44.6
CAN.G278.5 Capsicum annuum HOM05D005034 ORTHO05D006234 2.9e-34 149.4 249 44.6
CAN.G413.9 Capsicum annuum HOM05D005034 ORTHO05D006234 2.9e-34 149.4 249 44.6
DCAR_032535 Daucus carota HOM05D005034 ORTHO05D006234 1.1e-33 147.5 252 44.0
HanXRQChr11g0323731 Helianthus annuus HOM05D005034 ORTHO05D006234 2.4e-33 146.4 234 46.2
SalBow1G5942 Salvia bowleyana HOM05D005034 ORTHO05D006234 4.1e-33 145.6 246 42.3
HanXRQChr00c0690g0576751 Helianthus annuus HOM05D005034 ORTHO05D006234 9.2e-33 144.4 198 50.5
C07p33420 Brassica napus HOM05D005034 ORTHO05D006234 1.6e-32 143.7 258 41.9
C09p40380 Brassica napus HOM05D005034 ORTHO05D006234 1.6e-32 143.7 258 41.9
ATCG01040 Arabidopsis thaliana HOM05D005034 ORTHO05D006234 2.0e-32 143.3 258 41.9
BolSC29t60543H Brassica oleracea HOM05D005034 ORTHO05D006234 2.0e-32 143.3 257 42.0
BraSC103t45426Z Brassica rapa HOM05D005034 ORTHO05D006234 2.0e-32 143.3 258 41.9
BraSC138t45537Z Brassica rapa HOM05D005034 ORTHO05D006234 2.0e-32 143.3 258 41.9
BraSC179t45777Z Brassica rapa HOM05D005034 ORTHO05D006234 2.0e-32 143.3 258 41.9
BraSC25t45907Z Brassica rapa HOM05D005034 ORTHO05D006234 2.0e-32 143.3 258 41.9
BraSC59t46548Z Brassica rapa HOM05D005034 ORTHO05D006234 2.0e-32 143.3 258 41.9
BolSC29t60503H Brassica oleracea HOM05D005034 ORTHO05D006234 2.7e-32 142.9 258 41.9
BolSC35t60695H Brassica oleracea HOM05D005034 ORTHO05D006234 2.7e-32 142.9 258 41.9
BolSC35t60701H Brassica oleracea HOM05D005034 ORTHO05D006234 2.7e-32 142.9 258 41.9
BolSC46t60961H Brassica oleracea HOM05D005034 ORTHO05D006234 2.7e-32 142.9 258 41.9
BolSC47t61067H Brassica oleracea HOM05D005034 ORTHO05D006234 2.7e-32 142.9 258 41.9
BolSC49t61140H Brassica oleracea HOM05D005034 ORTHO05D006234 1.3e-31 140.6 256 41.4
Potri.001G342966 Populus trichocarpa HOM05D005034 ORTHO05D006234 2.3e-31 139.8 200 47.0
RcHm_v2.0_CPg0502821 Rosa chinensis HOM05D005034 ORTHO05D006234 8.6e-31 137.9 117 69.2
Sed0020615 Sechium edule HOM05D005034 ORTHO05D006234 1.1e-30 137.5 236 44.5
HanXRQChr09g0258531 Helianthus annuus HOM05D005034 ORTHO05D006234 5.6e-30 135.2 215 46.5
Peaxi162Scf01164g00036 Petunia axillaris HOM05D005034 ORTHO05D006234 9.5e-30 134.4 261 42.5
Lj9P89T19 Lonicera japonica HOM05D005034 ORTHO05D006234 1.6e-29 133.7 196 46.4
HanXRQChr08g0212001 Helianthus annuus HOM05D005034 ORTHO05D006234 4.7e-29 132.1 130 61.5
Gohir.D03G077700 Gossypium hirsutum HOM05D005034 ORTHO05D006234 9.8e-27 124.4 204 42.6
Eucgr.C03526 Eucalyptus grandis HOM05D005034 ORTHO05D006234 1.3e-26 124.0 162 46.9
Solyc00g500085.1 Solanum lycopersicum HOM05D005034 ORTHO05D006234 3.2e-25 119.4 115 62.6
MBI10_g47592_MAGBIO Magnolia biondii HOM05D005034 ORTHO05D006234 4.1e-25 119.0 206 42.7
BolC9t56928H Brassica oleracea HOM05D005034 ORTHO05D006234 2.0e-24 116.7 117 59.8
HanXRQChr17g0557781 Helianthus annuus HOM05D005034 ORTHO05D006234 7.8e-24 114.8 228 40.4
Solyc11g021210.2 Solanum lycopersicum HOM05D005034 ORTHO05D006234 1.7e-23 113.6 117 59.8
GSVIVG01004975001 Vitis vinifera HOM05D005034 ORTHO05D006234 2.3e-23 113.2 146 50.7
BraSC143t45663Z Brassica rapa HOM05D005034 ORTHO05D006234 6.6e-23 111.7 118 57.6
Hma1.2p1_0665F.1_g199050 Hydrangea macrophylla HOM05D005034 ORTHO05D006234 1.1e-22 110.9 90 71.1
Oeu010692.1 Olea europaea HOM05D005034 ORTHO05D006234 1.5e-22 110.5 161 46.6
Ciclev10010882m.g Citrus clementina HOM05D005034 ORTHO05D006234 1.9e-22 110.2 144 49.3
Ciclev10018423m.g Citrus clementina HOM05D005034 ORTHO05D006234 1.9e-22 110.2 144 49.3
Ciclev10027633m.g Citrus clementina HOM05D005034 ORTHO05D006234 1.9e-22 110.2 144 49.3
Ciclev10027652m.g Citrus clementina HOM05D005034 ORTHO05D006234 1.9e-22 110.2 144 49.3
Ciclev10030457m.g Citrus clementina HOM05D005034 ORTHO05D006234 1.9e-22 110.2 144 49.3
Manes.18G138354 Manihot esculenta HOM05D005034 ORTHO05D006234 2.5e-22 109.8 95 66.3
Nitab4.5_0000100g0130 Nicotiana tabacum HOM05D005034 ORTHO05D006234 2.5e-22 109.8 148 50.0
Migut.D01256 Erythranthe guttata HOM05D005034 ORTHO05D006234 5.6e-22 108.6 145 46.2
BolC2t10593H Brassica oleracea HOM05D005034 ORTHO05D006234 3.6e-21 105.9 110 59.1
HanXRQChr09g0251521 Helianthus annuus HOM05D005034 ORTHO05D006234 1.8e-20 103.6 166 43.4
BolC6t36207H Brassica oleracea HOM05D005034 ORTHO05D006234 2.9e-18 96.3 97 58.8
Lalb_Chr05g0227101 Lupinus albus HOM05D005034 ORTHO05D006234 4.1e-17 92.4 66 77.3
Ciclev10013963m.g Citrus clementina HOM05D005034 ORTHO05D006234 7.3e-14 81.6 111 47.7
Gorai.002G058800 Gossypium raimondii HOM05D005034 ORTHO05D006234 2.1e-13 80.1 121 47.1
Gohir.D03G074401 Gossypium hirsutum HOM05D005034 ORTHO05D006234 1.4e-12 77.4 121 45.5
RcHm_v2.0_Chr5g0017241 Rosa chinensis HOM05D005034 ORTHO05D006234 3.1e-12 76.3 81 53.1
arahy.Tifrunner.gnm1.ann1.RW0ZF5 Arachis hypogaea HOM05D005034 ORTHO05D006234 6.8e-12 75.1 79 50.6
HanXRQChr00c0504g0575291 Helianthus annuus HOM05D005034 ORTHO05D006234 4.4e-11 72.4 88 52.3
Nn1g08156 Nelumbo nucifera HOM05D005034 ORTHO05D006234 1.3e-10 70.9 77 51.9
Pp3c2_30980 Physcomitrium patens HOM05D005034 ORTHO05D006234 6.4e-10 68.6 214 32.7
Lalb_Chr23g0274781 Lupinus albus HOM05D005034 ORTHO05D006234 5.6e-06 55.5 155 31.0


User provided reference genes

Program Settings