Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund25533 Selenicereus undatus HOM05D006702 ORTHO05D008540 1.6e-126 456.1 229 100.0
Sc02g0001610 Simmondsia chinensis HOM05D006702 ORTHO05D008540 6.4e-38 161.8 174 53.4
Potri.016G093000 Populus trichocarpa HOM05D006702 ORTHO05D008540 1.2e-31 141.0 149 55.0
Atru.chr8.1809 Acer truncatum HOM05D006702 ORTHO05D008540 1.7e-30 137.1 126 60.3
EL10Ac7g16628 Beta vulgaris HOM05D006702 ORTHO05D008540 1.7e-30 137.1 90 73.3
QL07p043496 Quercus lobata HOM05D006702 ORTHO05D008540 2.2e-30 136.7 132 58.3
RcHm_v2.0_Chr3g0470251 Rosa chinensis HOM05D006702 ORTHO05D008540 2.2e-30 136.7 120 60.8
TWI77G0937 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 6.4e-30 135.2 164 51.2
CiPaw.10G130200 Carya illinoinensis HOM05D006702 ORTHO05D008540 8.3e-30 134.8 108 63.9
QL07p043331 Quercus lobata HOM05D006702 ORTHO05D008540 8.3e-30 134.8 132 57.6
FvH4_6g16390 Fragaria vesca HOM05D006702 ORTHO05D008540 1.9e-29 133.7 122 57.4
FAN14G1896 Fragaria x ananassa HOM05D006702 ORTHO05D008540 1.9e-29 133.7 122 57.4
AUR62042500 Chenopodium quinoa HOM05D006702 ORTHO05D008540 2.4e-29 133.3 86 72.1
C03p01460 Brassica napus HOM05D006702 ORTHO05D008540 4.1e-29 132.5 151 51.0
Gohir.A04G072000 Gossypium hirsutum HOM05D006702 ORTHO05D008540 4.1e-29 132.5 113 63.7
GSVIVG01025733001 Vitis vinifera HOM05D006702 ORTHO05D008540 4.1e-29 132.5 73 82.2
Haze_20547 Corylus avellana HOM05D006702 ORTHO05D008540 7.1e-29 131.7 117 58.1
Sp6g39370 Schrenkiella parvula HOM05D006702 ORTHO05D008540 9.2e-29 131.3 142 53.5
TWI53G0904 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 9.2e-29 131.3 85 72.9
CANSAT80G0135 Cannabis sativa HOM05D006702 ORTHO05D008540 1.6e-28 130.6 128 57.0
CiPaw.10G130000 Carya illinoinensis HOM05D006702 ORTHO05D008540 1.6e-28 130.6 108 62.0
Prupe.6G232200 Prunus persica HOM05D006702 ORTHO05D008540 1.6e-28 130.6 161 48.4
BcaB01g05844 Brassica carinata HOM05D006702 ORTHO05D008540 2.1e-28 130.2 176 46.0
BolC3t12702H Brassica oleracea HOM05D006702 ORTHO05D008540 2.1e-28 130.2 176 46.0
FAN05G3937 Fragaria x ananassa HOM05D006702 ORTHO05D008540 2.7e-28 129.8 125 56.0
Gorai.009G414600 Gossypium raimondii HOM05D006702 ORTHO05D008540 3.5e-28 129.4 94 70.2
MELO3C024465.2 Cucumis melo HOM05D006702 ORTHO05D008540 4.6e-28 129.0 130 57.7
Carub.0006s0219 Capsella rubella HOM05D006702 ORTHO05D008540 7.8e-28 128.3 138 53.6
ClCG04G009300 Citrullus lanatus HOM05D006702 ORTHO05D008540 7.8e-28 128.3 134 55.2
MSTRG.10321 Avicennia marina HOM05D006702 ORTHO05D008540 1.0e-27 127.9 146 50.7
Haze_20544 Corylus avellana HOM05D006702 ORTHO05D008540 1.0e-27 127.9 117 56.4
Manes.09G067614 Manihot esculenta HOM05D006702 ORTHO05D008540 1.0e-27 127.9 109 64.2
BraA03t09496Z Brassica rapa HOM05D006702 ORTHO05D008540 1.3e-27 127.5 150 53.3
Aqoxy2G01772 Aquilegia oxysepala HOM05D006702 ORTHO05D008540 1.7e-27 127.1 68 85.3
Gohir.D04G110501 Gossypium hirsutum HOM05D006702 ORTHO05D008540 2.3e-27 126.7 73 78.1
Lalb_Chr06g0171741 Lupinus albus HOM05D006702 ORTHO05D008540 2.3e-27 126.7 100 64.0
AL6G12700 Arabidopsis lyrata HOM05D006702 ORTHO05D008540 3.0e-27 126.3 129 58.1
Thhalv10003274m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 3.0e-27 126.3 153 51.6
PGR142G4417 Punica granatum HOM05D006702 ORTHO05D008540 3.0e-27 126.3 151 51.7
Aa31LG1G21770 Aethionema arabicum HOM05D006702 ORTHO05D008540 3.9e-27 125.9 146 54.1
A03p01140 Brassica napus HOM05D000070 ORTHO05D001255 5.1e-27 125.6 154 52.6
CARHR209960 Cardamine hirsuta HOM05D006702 ORTHO05D008540 5.1e-27 125.6 117 59.8
Phvul.007G219250 Phaseolus vulgaris HOM05D006702 ORTHO05D008540 6.6e-27 125.2 101 61.4
AT5G03370 Arabidopsis thaliana HOM05D006702 ORTHO05D008540 8.6e-27 124.8 85 71.8
AUR62040349 Chenopodium quinoa HOM05D006702 ORTHO05D008540 8.6e-27 124.8 71 77.5
PSO339G3061 Papaver somniferum HOM05D006702 ORTHO05D008540 8.6e-27 124.8 136 52.2
Nitab4.5_0008928g0010 Nicotiana tabacum HOM05D006702 ORTHO05D008540 1.5e-26 124.0 150 50.0
VMungo0720G0934 Vigna mungo HOM05D006702 ORTHO05D008540 1.5e-26 124.0 82 70.7
CsaV3_6G039890 Cucumis sativus L. HOM05D006702 ORTHO05D008540 1.9e-26 123.6 132 53.0
Gorai.006G163300 Gossypium raimondii HOM05D006702 ORTHO05D008540 1.9e-26 123.6 103 60.2
Sed0024166 Sechium edule HOM05D006702 ORTHO05D008540 2.5e-26 123.2 73 76.7
Cpa.g.sc54.80 Carica papaya HOM05D006702 ORTHO05D008540 3.3e-26 122.9 69 79.7
Gohir.D09G142300 Gossypium hirsutum HOM05D006702 ORTHO05D008540 3.3e-26 122.9 103 59.2
Nitab4.5_0000578g0200 Nicotiana tabacum HOM05D006702 ORTHO05D008540 3.3e-26 122.9 162 45.7
Oeu045060.1 Olea europaea HOM05D006702 ORTHO05D008540 3.3e-26 122.9 104 61.5
CSS0007009 Camellia sinensis var. sinensis HOM05D006702 ORTHO05D008540 4.3e-26 122.5 112 60.7
Glyma.13G142500 Glycine max HOM05D006702 ORTHO05D008540 4.3e-26 122.5 95 65.3
Lj5g0016847 Lotus japonicus HOM05D006702 ORTHO05D008540 4.3e-26 122.5 82 68.3
arahy.Tifrunner.gnm1.ann1.C2LQEN Arachis hypogaea HOM05D006702 ORTHO05D008540 5.6e-26 122.1 79 73.4
arahy.Tifrunner.gnm1.ann1.NQ6TBI Arachis hypogaea HOM05D006702 ORTHO05D008540 5.6e-26 122.1 79 73.4
Duzib106G0264 Durio zibethinus HOM05D006702 ORTHO05D008540 5.6e-26 122.1 87 67.8
Eucgr.K02933 Eucalyptus grandis HOM05D006702 ORTHO05D008540 5.6e-26 122.1 68 79.4
THA.LOC104823233 Tarenaya hassleriana HOM05D006702 ORTHO05D008540 7.3e-26 121.7 85 67.1
Migut.L01703 Erythranthe guttata HOM05D006702 ORTHO05D008540 9.5e-26 121.3 127 55.9
Sopen09g002990 Solanum pennellii HOM05D006702 ORTHO05D008540 9.5e-26 121.3 108 57.4
Thecc.05G066700 Theobroma cacao HOM05D006702 ORTHO05D008540 9.5e-26 121.3 87 67.8
Gohir.A09G146600 Gossypium hirsutum HOM05D006702 ORTHO05D008540 1.2e-25 120.9 103 58.3
MD04G1093600 Malus domestica HOM05D006702 ORTHO05D008540 1.2e-25 120.9 106 59.4
PGSC0003DMG400003886 Solanum tuberosum HOM05D006702 ORTHO05D008540 2.1e-25 120.2 97 60.8
Actinidia32493 Actinidia chinensis HOM05D006702 ORTHO05D008540 2.8e-25 119.8 74 75.7
Duzib128G1950 Durio zibethinus HOM05D006702 ORTHO05D008540 2.8e-25 119.8 66 80.3
Solyc09g008190.3 Solanum lycopersicum HOM05D006702 ORTHO05D008540 2.8e-25 119.8 95 61.1
Ciclev10012549m.g Citrus clementina HOM05D006702 ORTHO05D008540 4.7e-25 119.0 143 48.3
Medtr1g063240 Medicago truncatula HOM05D006702 ORTHO05D008540 4.7e-25 119.0 92 65.2
CAN.G900.34 Capsicum annuum HOM05D006702 ORTHO05D008540 6.2e-25 118.6 98 61.2
Nn2g13794 Nelumbo nucifera HOM05D006702 ORTHO05D008540 6.2e-25 118.6 136 49.3
Nn2g13797 Nelumbo nucifera HOM05D006702 ORTHO05D008540 6.2e-25 118.6 136 49.3
TPR.G11275 Trifolium pratense HOM05D006702 ORTHO05D008540 1.4e-24 117.5 90 65.6
ECA233G1636 Erigeron canadensis HOM05D006702 ORTHO05D008540 1.8e-24 117.1 86 65.1
Hma1.2p1_0205F.1_g087030 Hydrangea macrophylla HOM05D006702 ORTHO05D008540 1.8e-24 117.1 68 79.4
SGA_v2.0_scaffold224G42945 Striga asiatica HOM05D006702 ORTHO05D008540 1.8e-24 117.1 67 77.6
Sabra16G0098200 Salix brachista HOM05D006702 ORTHO05D008540 3.1e-24 116.3 109 56.0
CiPaw.09G172500 Carya illinoinensis HOM05D006702 ORTHO05D008540 5.2e-24 115.5 71 73.2
unitig_0.g683 Utricularia gibba HOM05D006702 ORTHO05D008540 5.2e-24 115.5 163 47.9
Thhalv10014711m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 6.8e-24 115.2 185 45.4
SEGI_37807 Sequoiadendron giganteum HOM05D006702 ORTHO05D008540 8.9e-24 114.8 81 66.7
ATR0171G014 Amborella trichopoda HOM05D006702 ORTHO05D008540 1.5e-23 114.0 67 76.1
Psat6g074160 Pisum sativum HOM05D006702 ORTHO05D008540 2.0e-23 113.6 104 56.7
TAR369G0293 Trochodendron aralioides HOM05D006702 ORTHO05D008540 2.0e-23 113.6 65 78.5
Lj2P122T8 Lonicera japonica HOM05D006702 ORTHO05D008540 3.4e-23 112.8 64 79.7
Ca_11502_v3 Cicer arietinum L. HOM05D006702 ORTHO05D008540 9.9e-23 111.3 95 60.0
Cc06_g04220 Coffea canephora HOM05D006702 ORTHO05D008540 2.2e-22 110.2 67 74.6
Thhalv10029095m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 2.9e-22 109.8 65 76.9
CDE05G1201 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 6.4e-22 108.6 79 62.0
DCAR_020817 Daucus carota HOM05D006702 ORTHO05D008540 1.9e-21 107.1 69 72.5
CARHR118060 Cardamine hirsuta HOM05D006702 ORTHO05D008540 2.4e-21 106.7 65 73.8
Lsat_1_v5_gn_6_25081 Lactuca sativa HOM05D006702 ORTHO05D008540 4.1e-21 105.9 101 57.4
Lalb_Chr24g0398871 Lupinus albus HOM05D006702 ORTHO05D008540 4.1e-21 105.9 77 63.6
AagrBONN_evm.TU.Sc2ySwM_368.2290 Anthoceros agrestis HOM05D006702 ORTHO05D008540 1.2e-20 104.4 71 60.6
Mapoly0013s0202 Marchantia polymorpha HOM05D006702 ORTHO05D008540 3.0e-19 99.8 70 62.9
Zm00001eb380050 Zea mays HOM05D006702 ORTHO05D008540 6.6e-19 98.6 78 64.1
Nitab4.5_0008928g0020 Nicotiana tabacum HOM05D006702 ORTHO05D008540 1.1e-18 97.8 66 66.7
CAN.G900.33 Capsicum annuum HOM05D006702 ORTHO05D008540 5.6e-18 95.5 66 65.2
Os06g0264700 Oryza sativa ssp. japonica HOM05D006702 ORTHO05D008540 9.6e-18 94.7 64 68.8
DCAR_014995 Daucus carota HOM05D006702 ORTHO05D008540 2.1e-17 93.6 70 61.4
Peaxi162Scf01139g00005 Petunia axillaris HOM05D006702 ORTHO05D008540 2.1e-17 93.6 68 63.2
Pp3c18_4750 Physcomitrium patens HOM05D006702 ORTHO05D008540 2.8e-17 93.2 85 52.9
SMO137G0384 Selaginella moellendorffii HOM05D006702 ORTHO05D008540 4.7e-17 92.4 64 62.5
AagrBONN_evm.TU.Sc2ySwM_362.139 Anthoceros agrestis HOM05D006702 ORTHO05D008540 1.1e-16 91.3 62 61.3
Zm00001eb380040 Zea mays HOM05D006702 ORTHO05D008540 2.4e-16 90.1 89 51.7
Pp3c1_15300 Physcomitrium patens HOM05D006702 ORTHO05D008540 4.0e-16 89.4 83 49.4
Potri.006G124966 Populus trichocarpa HOM05D006702 ORTHO05D008540 1.1e-13 81.3 76 57.9
FAN02G1423 Fragaria x ananassa HOM05D006702 ORTHO05D008540 5.6e-10 68.9 89 44.9
FAN05G1090 Fragaria x ananassa HOM05D006702 ORTHO05D008540 5.6e-10 68.9 89 44.9
CDE05G1088 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 3.6e-09 66.2 50 64.0
Pp3c5_16270 Physcomitrium patens HOM05D006702 ORTHO05D008540 3.6e-09 66.2 69 40.6
Sabra06G0098700 Salix brachista HOM05D000002 ORTHO05D000047 2.0e-07 60.5 46 65.2


User provided reference genes

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