Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund25491 Selenicereus undatus HOM05D006885 ORTHO05D008606 1.0e-42 176.4 94 100.0
Ah.03g135790 Amaranthus hybridus HOM05D006885 ORTHO05D008606 1.3e-18 96.3 49 91.8
AUR62005687 Chenopodium quinoa HOM05D006885 ORTHO05D008606 3.0e-18 95.1 48 91.7
AUR62028871 Chenopodium quinoa HOM05D006885 ORTHO05D008606 3.0e-18 95.1 48 91.7
Duzib052G0936 Durio zibethinus HOM05D006885 ORTHO05D008606 5.1e-18 94.4 47 95.7
Duzib248G1150 Durio zibethinus HOM05D006885 ORTHO05D008606 1.1e-17 93.2 47 93.6
Cc11_g17420 Coffea canephora HOM05D006885 ORTHO05D008606 1.5e-17 92.8 48 89.6
Sp1g23670 Schrenkiella parvula HOM05D006885 ORTHO05D008606 1.5e-17 92.8 47 93.6
Dinv25633 Davidia involucrata HOM05D006885 ORTHO05D008606 4.3e-17 91.3 48 87.5
Actinidia19564 Actinidia chinensis HOM05D006885 ORTHO05D008606 7.4e-17 90.5 78 65.4
MSTRG.471 Avicennia marina HOM05D006885 ORTHO05D008606 7.4e-17 90.5 44 97.7
Oeu011334.1 Olea europaea HOM05D006885 ORTHO05D008606 7.4e-17 90.5 44 97.7
Oeu044483.1 Olea europaea HOM05D006885 ORTHO05D008606 7.4e-17 90.5 44 97.7
Peaxi162Scf00962g00024 Petunia axillaris HOM05D006885 ORTHO05D008606 7.4e-17 90.5 44 97.7
TWI75G1759 Tripterygium wilfordii HOM05D006885 ORTHO05D008606 7.4e-17 90.5 79 65.8
Dinv33305 Davidia involucrata HOM05D006885 ORTHO05D008606 9.7e-17 90.1 46 91.3
THA.LOC104825479 Tarenaya hassleriana HOM05D006885 ORTHO05D008606 9.7e-17 90.1 64 76.6
Thhalv10009236m.g Eutrema salsugineum HOM05D006885 ORTHO05D008606 1.3e-16 89.7 47 89.4
Aa31LG7G9990 Aethionema arabicum HOM05D006885 ORTHO05D008606 1.6e-16 89.4 78 62.8
Haze_11752 Corylus avellana HOM05D006885 ORTHO05D008606 1.6e-16 89.4 46 89.1
Nitab4.5_0000913g0010 Nicotiana tabacum HOM05D006885 ORTHO05D008606 1.6e-16 89.4 44 95.5
AL1G40850 Arabidopsis lyrata HOM05D006885 ORTHO05D008606 2.2e-16 89.0 47 87.2
AT1G27435 Arabidopsis thaliana HOM05D006885 ORTHO05D008606 2.2e-16 89.0 47 87.2
CARHR027030 Cardamine hirsuta HOM05D006885 ORTHO05D008606 2.2e-16 89.0 48 87.5
BcaB03g13983 Brassica carinata HOM05D006885 ORTHO05D008606 2.8e-16 88.6 45 91.1
BcaC01g01613 Brassica carinata HOM05D006885 ORTHO05D008606 2.8e-16 88.6 45 91.1
BcaC01g06952 Brassica carinata HOM05D006885 ORTHO05D008606 2.8e-16 88.6 45 91.1
BcaC06g35293 Brassica carinata HOM05D006885 ORTHO05D008606 2.8e-16 88.6 45 91.1
A07p11750 Brassica napus HOM05D006885 ORTHO05D008606 2.8e-16 88.6 45 91.1
A08p26290 Brassica napus HOM05D006885 ORTHO05D008606 2.8e-16 88.6 45 91.1
C03p73770 Brassica napus HOM05D006885 ORTHO05D008606 2.8e-16 88.6 45 91.1
C07p17740 Brassica napus HOM05D006885 ORTHO05D008606 2.8e-16 88.6 45 91.1
BolC3t19669H Brassica oleracea HOM05D006885 ORTHO05D008606 2.8e-16 88.6 45 91.1
BolC7t42280H Brassica oleracea HOM05D006885 ORTHO05D008606 2.8e-16 88.6 45 91.1
BraA07t28960Z Brassica rapa HOM05D006885 ORTHO05D008606 2.8e-16 88.6 45 91.1
BraA08t34580Z Brassica rapa HOM05D006885 ORTHO05D008606 2.8e-16 88.6 45 91.1
Migut.K00992 Erythranthe guttata HOM05D006885 ORTHO05D008606 2.8e-16 88.6 44 95.5
Gohir.A04G101300 Gossypium hirsutum HOM05D006885 ORTHO05D008606 2.8e-16 88.6 44 95.5
Gohir.D04G140400 Gossypium hirsutum HOM05D006885 ORTHO05D008606 2.8e-16 88.6 44 95.5
Gorai.012G125400 Gossypium raimondii HOM05D006885 ORTHO05D008606 2.8e-16 88.6 44 95.5
Aqoxy5G03235 Aquilegia oxysepala HOM05D006885 ORTHO05D008606 3.7e-16 88.2 45 91.1
Thecc.02G198000 Theobroma cacao HOM05D006885 ORTHO05D008606 3.7e-16 88.2 74 66.2
Carub.0001s2598 Capsella rubella HOM05D006885 ORTHO05D008606 4.8e-16 87.8 46 89.1
Manes.11G080000 Manihot esculenta HOM05D006885 ORTHO05D008606 4.8e-16 87.8 45 88.9
QL03p050754 Quercus lobata HOM05D006885 ORTHO05D008606 4.8e-16 87.8 46 91.3
CSS0038255 Camellia sinensis var. sinensis HOM05D006885 ORTHO05D008606 6.3e-16 87.4 84 60.7
Cfa008736 Carpinus fangiana HOM05D000120 ORTHO05D000068 6.3e-16 87.4 45 91.1
Dinv09126 Davidia involucrata HOM05D006885 ORTHO05D008606 6.3e-16 87.4 45 93.3
Ca_06520_v3 Cicer arietinum L. HOM05D006885 ORTHO05D008606 1.1e-15 86.7 44 93.2
Ciclev10033198m.g Citrus clementina HOM05D006885 ORTHO05D008606 1.1e-15 86.7 44 93.2
RcHm_v2.0_Chr4g0429451 Rosa chinensis HOM05D006885 ORTHO05D008606 1.1e-15 86.7 44 93.2
CsaV3_6G007910 Cucumis sativus L. HOM05D006885 ORTHO05D008606 1.4e-15 86.3 44 90.9
TPR.G15605 Trifolium pratense HOM05D006885 ORTHO05D008606 1.4e-15 86.3 44 90.9
Atru.chr11.2397 Acer truncatum HOM05D006885 ORTHO05D008606 1.8e-15 85.9 66 69.7
CiPaw.05G104600 Carya illinoinensis HOM05D006885 ORTHO05D008606 1.8e-15 85.9 44 93.2
Lsat_1_v5_gn_4_1780 Lactuca sativa HOM05D006885 ORTHO05D008606 1.8e-15 85.9 45 86.7
SGA_v2.0_scaffold9G04792 Striga asiatica HOM05D006885 ORTHO05D008606 1.8e-15 85.9 45 86.7
CiPaw.06G106900 Carya illinoinensis HOM05D006885 ORTHO05D008606 2.4e-15 85.5 44 90.9
ClCG06G001860 Citrullus lanatus HOM05D006885 ORTHO05D008606 2.4e-15 85.5 44 90.9
FvH4_4g23120 Fragaria vesca HOM05D006885 ORTHO05D008606 2.4e-15 85.5 44 90.9
FAN07G1762 Fragaria x ananassa HOM05D006885 ORTHO05D008606 2.4e-15 85.5 44 90.9
FAN12G2334 Fragaria x ananassa HOM05D006885 ORTHO05D008606 2.4e-15 85.5 44 90.9
FAN17G2783 Fragaria x ananassa HOM05D006885 ORTHO05D008606 2.4e-15 85.5 44 90.9
Hma1.2p1_0459F.1_g157320 Hydrangea macrophylla HOM05D006885 ORTHO05D008606 2.4e-15 85.5 44 90.9
MD13G1125100 Malus domestica HOM05D006885 ORTHO05D008606 2.4e-15 85.5 44 90.9
Phvul.008G000900 Phaseolus vulgaris HOM05D006885 ORTHO05D008606 2.4e-15 85.5 44 90.9
Sopen01g005380 Solanum pennellii HOM05D006885 ORTHO05D008606 2.4e-15 85.5 44 93.2
MELO3C035240.2 Cucumis melo HOM05D006885 ORTHO05D008606 3.1e-15 85.1 56 75.0
Glyma.08G361800 Glycine max HOM05D006885 ORTHO05D008606 4.1e-15 84.7 43 93.0
PGSC0003DMG400011888 Solanum tuberosum HOM05D006885 ORTHO05D008606 4.1e-15 84.7 80 62.5
CAN.G1264.4 Capsicum annuum HOM05D006885 ORTHO05D008606 5.3e-15 84.3 44 93.2
DCAR_024641 Daucus carota HOM05D006885 ORTHO05D008606 5.3e-15 84.3 45 86.7
ECA232G0525 Erigeron canadensis HOM05D006885 ORTHO05D008606 5.3e-15 84.3 45 84.4
LjContig00312_ERROPOS870357g0004846 Lotus japonicus HOM05D006885 ORTHO05D008606 5.3e-15 84.3 56 78.6
Sc11g0000250 Simmondsia chinensis HOM05D006885 ORTHO05D008606 5.3e-15 84.3 42 95.2
Manes.04G090052 Manihot esculenta HOM05D006885 ORTHO05D008606 9.0e-15 83.6 75 61.3
Potri.001G325000 Populus trichocarpa HOM05D006885 ORTHO05D008606 9.0e-15 83.6 77 59.7
Sabra16G0207500 Salix brachista HOM05D006885 ORTHO05D008606 9.0e-15 83.6 77 61.0
TAR629G2182 Trochodendron aralioides HOM05D006885 ORTHO05D008606 9.0e-15 83.6 69 66.7
HanXRQChr03g0067371 Helianthus annuus HOM05D006885 ORTHO05D008606 1.2e-14 83.2 45 84.4
MD16G1125900 Malus domestica HOM05D006885 ORTHO05D008606 1.2e-14 83.2 75 62.7
Eucgr.B03538 Eucalyptus grandis HOM05D006885 ORTHO05D008606 2.0e-14 82.4 89 56.2
Medtr3g074700 Medicago truncatula HOM05D006885 ORTHO05D008606 2.0e-14 82.4 64 68.8
Nn2g15930 Nelumbo nucifera HOM05D006885 ORTHO05D008606 2.0e-14 82.4 44 88.6
Sed0025765 Sechium edule HOM05D006885 ORTHO05D008606 2.0e-14 82.4 44 84.1
unitig_26.g10421 Utricularia gibba HOM05D006885 ORTHO05D008606 2.0e-14 82.4 44 90.9
Glyma.18G300000 Glycine max HOM05D006885 ORTHO05D008606 3.4e-14 81.6 66 66.7
Lj6A834T26 Lonicera japonica HOM05D006885 ORTHO05D008606 5.9e-14 80.9 43 86.0
Lalb_Chr10g0091171 Lupinus albus HOM05D006885 ORTHO05D008606 5.9e-14 80.9 44 90.9
HPP92_021628 Vanilla planifolia HOM05D006885 ORTHO05D008606 5.9e-14 80.9 48 77.1
HPP92_021686 Vanilla planifolia HOM05D006885 ORTHO05D008606 5.9e-14 80.9 48 77.1
CANSAT01G1896 Cannabis sativa HOM05D006885 ORTHO05D008606 7.7e-14 80.5 70 62.9
Prupe.1G220300 Prunus persica HOM05D006885 ORTHO05D008606 7.7e-14 80.5 71 63.4
PGR119G0226 Punica granatum HOM05D006885 ORTHO05D008606 1.3e-13 79.7 43 86.0
Psat0s1880g0200 Pisum sativum HOM05D006885 ORTHO05D008606 1.7e-13 79.3 44 84.1
SalBow2G1383 Salvia bowleyana HOM05D006885 ORTHO05D008606 1.7e-13 79.3 44 86.4
Gorai.001G210600 Gossypium raimondii HOM05D006885 ORTHO05D008606 2.5e-12 75.5 42 85.7
PSO017G7113 Papaver somniferum HOM05D006885 ORTHO05D008606 4.2e-12 74.7 71 59.2
SalBow1G0427 Salvia bowleyana HOM05D006885 ORTHO05D008606 5.5e-12 74.3 44 81.8
Gohir.D07G189020 Gossypium hirsutum HOM05D006885 ORTHO05D008606 7.2e-12 73.9 42 83.3
EL10Ac6g13573 Beta vulgaris HOM05D006885 ORTHO05D008606 1.2e-11 73.2 36 97.2
Zm00001eb408880 Zea mays HOM05D006885 ORTHO05D008606 4.6e-11 71.2 44 70.5
CSS0039361 Camellia sinensis var. sinensis HOM05D006885 ORTHO05D008606 7.9e-11 70.5 36 94.4
GSVIVG01000942001 Vitis vinifera HOM05D006885 ORTHO05D008606 7.9e-11 70.5 36 94.4
SHI04153 Sapria himalayana HOM05D006885 ORTHO05D008606 1.4e-10 69.7 48 72.9
Gohir.A06G101502 Gossypium hirsutum HOM05D006885 ORTHO05D008606 3.0e-10 68.6 45 71.1
Zm00001eb133070 Zea mays HOM05D006885 ORTHO05D008606 6.7e-10 67.4 78 48.7
CDE05G1244 Ceratophyllum demersum HOM05D006885 ORTHO05D008606 2.0e-09 65.9 45 71.1
Gohir.D02G113400 Gossypium hirsutum HOM05D006885 ORTHO05D008606 9.7e-09 63.5 33 84.8
Gorai.005G128300 Gossypium raimondii HOM05D006885 ORTHO05D008606 9.7e-09 63.5 33 84.8
ATR0582G111 Amborella trichopoda HOM05D006885 ORTHO05D008606 1.3e-08 63.2 64 59.4
TPR.G7690 Trifolium pratense HOM05D006885 ORTHO05D008606 4.8e-08 61.2 28 92.9
Ah.02g131100 Amaranthus hybridus HOM05D006885 ORTHO05D008606 7.7e-06 53.9 34 76.5


User provided reference genes

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