Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund25423 Selenicereus undatus HOM05D002970 ORTHO05D009571 7.6e-147 523.9 274 100.0
EL10Ac6g15186 Beta vulgaris HOM05D002970 ORTHO05D009571 3.0e-95 352.4 272 70.6
AUR62005542 Chenopodium quinoa HOM05D002970 ORTHO05D009571 3.1e-79 299.3 272 63.2
GSVIVG01010294001 Vitis vinifera HOM05D002970 ORTHO05D009571 5.8e-78 295.0 269 58.7
QL03p055861 Quercus lobata HOM05D002970 ORTHO05D009571 1.4e-76 290.4 268 61.2
CSS0013806 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 2.4e-76 289.7 265 59.2
MD16G1107600 Malus domestica HOM05D002970 ORTHO05D009571 2.4e-76 289.7 261 62.1
Duzib248G1026 Durio zibethinus HOM05D002970 ORTHO05D009571 1.2e-75 287.3 262 60.3
CANSAT01G2975 Cannabis sativa HOM05D002970 ORTHO05D009571 3.5e-75 285.8 266 59.0
CiPaw.05G175600 Carya illinoinensis HOM05D002970 ORTHO05D009571 3.9e-74 282.3 270 57.0
COL.COLO4_23553 Corchorus olitorius HOM05D002970 ORTHO05D007037 5.0e-74 282.0 262 59.2
Prupe.1G238700 Prunus persica HOM05D002970 ORTHO05D009571 8.6e-74 281.2 259 61.4
Ciclev10032228m.g Citrus clementina HOM05D002970 ORTHO05D009571 4.3e-73 278.9 262 59.5
AUR62024190 Chenopodium quinoa HOM05D002970 ORTHO05D007037 9.5e-73 277.7 261 60.9
Ca_17805_v3 Cicer arietinum L. HOM05D002970 ORTHO05D009571 1.6e-72 276.9 255 60.0
Manes.12G018300 Manihot esculenta HOM05D002970 ORTHO05D009571 1.6e-72 276.9 258 60.1
Aqoxy5G03608 Aquilegia oxysepala HOM05D002970 ORTHO05D009571 1.4e-71 273.9 271 58.7
CsaV3_2G025140 Cucumis sativus L. HOM05D002970 ORTHO05D009571 1.8e-71 273.5 258 60.9
Gohir.A05G311600 Gossypium hirsutum HOM05D002970 ORTHO05D009571 2.3e-71 273.1 253 57.7
Sopen05g009220 Solanum pennellii HOM05D002970 ORTHO05D009571 3.1e-71 272.7 273 54.6
TPR.G6253 Trifolium pratense HOM05D002970 ORTHO05D009571 3.1e-71 272.7 252 58.3
Gorai.009G334200 Gossypium raimondii HOM05D002970 ORTHO05D009571 4.0e-71 272.3 260 56.9
Nitab4.5_0000041g0260 Nicotiana tabacum HOM05D002970 ORTHO05D009571 6.8e-71 271.6 267 54.3
Nitab4.5_0002688g0010 Nicotiana tabacum HOM05D002970 ORTHO05D009571 6.8e-71 271.6 267 54.3
PGR102G3027 Punica granatum HOM05D002970 ORTHO05D009571 6.8e-71 271.6 266 59.0
Lalb_Chr07g0185611 Lupinus albus HOM05D002970 ORTHO05D009571 2.0e-70 270.0 220 65.0
Phvul.002G257900 Phaseolus vulgaris HOM05D002970 ORTHO05D009571 3.4e-70 269.2 201 67.7
Potri.008G181400 Populus trichocarpa HOM05D002970 ORTHO05D009571 4.4e-70 268.9 258 56.6
CAN.G49.8 Capsicum annuum HOM05D002970 ORTHO05D009571 9.9e-70 267.7 270 53.7
Peaxi162Scf00128g00724 Petunia axillaris HOM05D002970 ORTHO05D009571 9.9e-70 267.7 267 54.3
MELO3C010711.2 Cucumis melo HOM05D002970 ORTHO05D009571 1.7e-69 266.9 258 58.9
PGSC0003DMG400010736 Solanum tuberosum HOM05D002970 ORTHO05D009571 2.2e-69 266.5 264 54.2
Thecc.02G269300 Theobroma cacao HOM05D002970 ORTHO05D009571 2.2e-69 266.5 262 55.7
Atru.chr11.2205 Acer truncatum HOM05D002970 ORTHO05D009571 8.3e-69 264.6 262 57.6
Atru.BG.282.p Acer truncatum HOM05D002970 ORTHO05D009571 1.4e-68 263.8 194 69.1
Medtr8g089550 Medicago truncatula HOM05D002970 ORTHO05D009571 1.4e-68 263.8 250 58.4
RcHm_v2.0_Chr4g0432001 Rosa chinensis HOM05D002970 ORTHO05D009571 1.9e-68 263.5 259 58.3
Cc11_g16280 Coffea canephora HOM05D002970 ORTHO05D009571 9.2e-68 261.2 278 54.7
MBI11_g24187_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 1.2e-67 260.8 273 54.2
FvH4_4g24960 Fragaria vesca HOM05D002970 ORTHO05D009571 3.5e-67 259.2 261 57.9
HanXRQChr17g0569221 Helianthus annuus HOM05D002970 ORTHO05D009571 3.5e-67 259.2 260 56.5
ECA234G3025 Erigeron canadensis HOM05D002970 ORTHO05D009571 4.6e-67 258.8 262 56.5
AL5G14780 Arabidopsis lyrata HOM05D002970 ORTHO05D009571 7.8e-67 258.1 264 55.7
arahy.Tifrunner.gnm1.ann1.4Z4H5J Arachis hypogaea HOM05D002970 ORTHO05D009571 1.3e-66 257.3 208 66.8
FAN12G3280 Fragaria x ananassa HOM05D002970 ORTHO05D009571 1.3e-66 257.3 261 57.9
arahy.Tifrunner.gnm1.ann1.C1FJC6 Arachis hypogaea HOM05D002970 ORTHO05D009571 1.7e-66 256.9 208 66.3
FAN17G2692 Fragaria x ananassa HOM05D002970 ORTHO05D009571 3.0e-66 256.1 261 57.5
Lsat_1_v5_gn_4_2440 Lactuca sativa HOM05D000799 ORTHO05D009571 3.0e-66 256.1 267 54.3
Carub.0005s0396 Capsella rubella HOM05D002970 ORTHO05D009571 3.9e-66 255.8 263 51.0
AT3G26085 Arabidopsis thaliana HOM05D002970 ORTHO05D009571 8.6e-66 254.6 264 53.8
CARHR147070 Cardamine hirsuta HOM05D002970 ORTHO05D009571 1.1e-65 254.2 263 52.5
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 4.3e-65 252.3 272 51.1
BcaC06g33929 Brassica carinata HOM05D002970 ORTHO05D009571 4.3e-65 252.3 272 51.1
Lj6C818G9 Lonicera japonica HOM05D002970 ORTHO05D009571 4.3e-65 252.3 258 56.2
PSO782G2321 Papaver somniferum HOM05D002970 ORTHO05D009571 5.6e-65 251.9 201 63.7
Sabra08G0138400 Salix brachista HOM05D000799 ORTHO05D000629 2.8e-64 249.6 279 51.3
vmacro16152 Vaccinium macrocarpon HOM05D002970 ORTHO05D009571 2.8e-64 249.6 305 48.9
BcaC06g31093 Brassica carinata HOM05D002970 ORTHO05D009571 6.2e-64 248.4 274 51.5
Thhalv10004665m.g Eutrema salsugineum HOM05D002970 ORTHO05D009571 6.2e-64 248.4 263 51.3
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 8.1e-64 248.1 273 51.6
Psat7g060120 Pisum sativum HOM05D002970 ORTHO05D009571 8.1e-64 248.1 230 60.0
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 1.1e-63 247.7 273 51.6
Sp2g15280 Schrenkiella parvula HOM05D002970 ORTHO05D009571 3.1e-63 246.1 268 51.1
ATR0824G068 Amborella trichopoda HOM05D002970 ORTHO05D009571 6.8e-63 245.0 277 50.9
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 2.0e-62 243.4 288 51.0
Eucgr.B03232 Eucalyptus grandis HOM05D002970 ORTHO05D009571 2.0e-62 243.4 260 54.6
SalBow2G2585 Salvia bowleyana HOM05D002970 ORTHO05D009571 2.0e-62 243.4 196 63.3
THA.LOC104825684 Tarenaya hassleriana HOM05D002970 ORTHO05D009571 2.6e-62 243.0 261 52.1
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 3.4e-62 242.7 272 51.5
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 2.2e-61 240.0 258 52.7
PSO063G2167 Papaver somniferum HOM05D002970 ORTHO05D009571 3.2e-60 236.1 242 55.4
Zm00001eb406400 Zea mays HOM05D002970 ORTHO05D009571 3.2e-60 236.1 192 58.9
TAR371G0312 Trochodendron aralioides HOM05D002970 ORTHO05D007037 1.6e-59 233.8 246 56.1
ClCG08G017480 Citrullus lanatus HOM05D002970 ORTHO05D009571 6.0e-59 231.9 291 49.1
Gohir.D05G312700 Gossypium hirsutum HOM05D002970 ORTHO05D009571 2.5e-57 226.5 260 50.8
CDE02G1212 Ceratophyllum demersum HOM05D002970 ORTHO05D009571 4.3e-57 225.7 271 48.3
HPP92_024537 Vanilla planifolia HOM05D002970 ORTHO05D009571 8.1e-56 221.5 267 46.8
Lj4g0006456 Lotus japonicus HOM05D002970 ORTHO05D009571 2.2e-53 213.4 240 50.8
Nn4g22479 Nelumbo nucifera HOM05D002970 ORTHO05D009571 1.1e-52 211.1 221 54.3
MD13G1107700 Malus domestica HOM05D002970 ORTHO05D009571 9.3e-52 208.0 260 49.6
TWI36G0308 Tripterygium wilfordii HOM05D002970 ORTHO05D009571 9.3e-52 208.0 215 55.8
Solyc05g014190.4 Solanum lycopersicum HOM05D002970 ORTHO05D009571 7.8e-51 204.9 224 50.9
Migut.K00672 Erythranthe guttata HOM05D002970 ORTHO05D009571 2.3e-50 203.4 276 46.7
Cpa.g.sc86.6 Carica papaya HOM05D002970 ORTHO05D009571 5.1e-50 202.2 359 38.4
unitig_749.g13282 Utricularia gibba HOM05D002970 ORTHO05D009571 8.7e-50 201.4 147 66.7
Aa31LG2G6280 Aethionema arabicum HOM05D002970 ORTHO05D009571 2.0e-46 190.3 267 44.9
Pp3c24_16920 Physcomitrium patens HOM05D002970 ORTHO05D009571 2.1e-43 180.3 205 45.9
Mapoly0082s0035 Marchantia polymorpha HOM05D002970 ORTHO05D009571 2.1e-40 170.2 265 38.9
AagrBONN_evm.TU.Sc2ySwM_344.962 Anthoceros agrestis HOM05D002970 ORTHO05D009571 1.7e-37 160.6 259 40.5
SMO365G0071 Selaginella moellendorffii HOM05D002970 ORTHO05D009571 1.4e-36 157.5 222 44.1
CSS0042994 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 5.3e-31 139.0 97 69.1
Sed0000980 Sechium edule HOM05D002970 ORTHO05D009571 6.5e-29 132.1 184 46.7
Dinv14770 Davidia involucrata HOM05D002970 ORTHO05D009571 1.4e-28 131.0 127 57.5
Glyma.05G172100 Glycine max HOM05D002970 ORTHO05D009571 6.0e-27 125.6 117 56.4
CBR_g20339 Chara braunii HOM05D002970 ORTHO05D009571 8.7e-26 121.7 176 39.2
PRCOL_00001586 Prasinoderma coloniale HOM05D002970 ORTHO05D009571 3.3e-25 119.8 217 34.6
MSTRG.542 Avicennia marina HOM05D002970 ORTHO05D009571 4.1e-23 112.8 173 41.6
DCAR_007026 Daucus carota HOM05D002970 ORTHO05D007037 1.4e-20 104.4 173 41.0
SEGI_41532 Sequoiadendron giganteum HOM05D031330 ORTHO05D009571 7.9e-19 98.6 166 39.8
Cre12.g556150 Chlamydomonas reinhardtii HOM05D002970 ORTHO05D009571 1.4e-18 97.8 225 31.6
MBI11_g22623_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 4.8e-16 89.4 90 55.6
arahy.Tifrunner.gnm1.ann1.WDY3XU Arachis hypogaea HOM05D002970 ORTHO05D009571 1.1e-15 88.2 153 45.8
MCO09G664 Micromonas commoda HOM05D002970 ORTHO05D009571 1.8e-15 87.4 117 40.2
Glyma.06G231900 Glycine max HOM05D002970 ORTHO05D009571 5.3e-15 85.9 61 65.6


User provided reference genes

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