Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund25421 Selenicereus undatus HOM05D007119 ORTHO05D009220 1.4e-273 945.7 476 100.0
Ah.03g133650 Amaranthus hybridus HOM05D007119 ORTHO05D009220 5.7e-190 667.9 466 71.0
AUR62024193 Chenopodium quinoa HOM05D007119 ORTHO05D009220 5.5e-185 651.4 481 69.6
Sc14g0008910 Simmondsia chinensis HOM05D007119 ORTHO05D009220 4.8e-181 638.3 473 67.9
Dinv14769 Davidia involucrata HOM05D007119 ORTHO05D009220 4.5e-179 631.7 473 66.0
COL.COLO4_23551 Corchorus olitorius HOM05D007119 ORTHO05D009220 8.5e-178 627.5 473 64.3
Thecc.02G269100 Theobroma cacao HOM05D007119 ORTHO05D009220 2.7e-176 622.5 475 64.4
Actinidia15126 Actinidia chinensis HOM05D007119 ORTHO05D009220 8.0e-176 620.9 462 64.9
CiPaw.05G175700 Carya illinoinensis HOM05D007119 ORTHO05D009220 5.2e-175 618.2 473 64.5
GSVIVG01010292001 Vitis vinifera HOM05D007119 ORTHO05D009220 1.1e-174 617.1 472 64.6
Hma1.2p1_0079F.1_g041390 Hydrangea macrophylla HOM05D007119 ORTHO05D009220 2.6e-174 615.9 472 64.8
EL10As2g23223 Beta vulgaris HOM05D007119 ORTHO05D009220 3.1e-172 609.0 478 67.4
Lalb_Chr23g0277791 Lupinus albus HOM05D007119 ORTHO05D009220 4.1e-172 608.6 468 65.0
FvH4_4g24980 Fragaria vesca HOM05D007119 ORTHO05D009220 9.1e-172 607.4 461 64.6
QL03p055873 Quercus lobata HOM05D007119 ORTHO05D009220 1.2e-171 607.1 473 64.7
Potri.008G181500 Populus trichocarpa HOM05D007119 ORTHO05D009220 7.7e-171 604.4 463 63.7
Eucgr.H04699 Eucalyptus grandis HOM05D007119 ORTHO05D009220 1.3e-170 603.6 470 63.4
Manes.13G018700 Manihot esculenta HOM05D007119 ORTHO05D009220 1.7e-170 603.2 472 63.1
Gohir.D12G151200 Gossypium hirsutum HOM05D007119 ORTHO05D009220 6.5e-170 601.3 472 62.9
vmacro16153 Vaccinium macrocarpon HOM05D007119 ORTHO05D009220 6.5e-170 601.3 517 59.2
Gorai.008G162700 Gossypium raimondii HOM05D007119 ORTHO05D009220 1.1e-169 600.5 472 62.9
CSS0010905 Camellia sinensis var. sinensis HOM05D007119 ORTHO05D009220 1.9e-169 599.7 473 62.2
TPR.G14230 Trifolium pratense HOM05D007119 ORTHO05D009220 9.4e-169 597.4 484 60.5
TAR629G0375 Trochodendron aralioides HOM05D007119 ORTHO05D009220 2.1e-168 596.3 474 62.0
Prupe.1G238900 Prunus persica HOM05D007119 ORTHO05D009220 2.7e-168 595.9 462 64.3
RcHm_v2.0_Chr4g0432041 Rosa chinensis HOM05D007119 ORTHO05D009220 3.6e-168 595.5 461 62.9
Glyma.11G245800 Glycine max HOM05D007119 ORTHO05D009220 4.7e-168 595.1 469 62.7
Duzib248G1022 Durio zibethinus HOM05D007119 ORTHO05D009220 6.1e-168 594.7 473 61.9
Medtr3g086170 Medicago truncatula HOM05D007119 ORTHO05D009220 8.0e-168 594.3 469 62.0
TWI36G1063 Tripterygium wilfordii HOM05D007119 ORTHO05D009220 6.8e-167 591.3 474 62.2
Atru.chr11.2204 Acer truncatum HOM05D007119 ORTHO05D009220 2.0e-166 589.7 470 62.8
Glyma.18G011400 Glycine max HOM05D007119 ORTHO05D009220 2.0e-166 589.7 472 62.5
Phvul.001G257500 Phaseolus vulgaris HOM05D007119 ORTHO05D009220 2.6e-166 589.3 472 62.1
CANSAT01G1522 Cannabis sativa HOM05D007119 ORTHO05D009220 1.7e-165 586.6 470 61.7
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 2.2e-165 586.3 536 57.3
arahy.Tifrunner.gnm1.ann1.3UY64B Arachis hypogaea HOM05D007119 ORTHO05D009220 3.1e-164 582.4 469 60.8
arahy.Tifrunner.gnm1.ann1.U7Q0BA Arachis hypogaea HOM05D007119 ORTHO05D009220 3.1e-164 582.4 469 60.8
Lj6g0003042 Lotus japonicus HOM05D007119 ORTHO05D009220 3.1e-164 582.4 472 61.4
Ciclev10031444m.g Citrus clementina HOM05D007119 ORTHO05D009220 7.0e-164 581.3 471 60.1
THA.LOC104825682 Tarenaya hassleriana HOM05D007119 ORTHO05D009220 2.2e-162 576.2 468 60.0
MD13G1107500 Malus domestica HOM05D007119 ORTHO05D009220 8.5e-162 574.3 463 62.2
CsaV3_5G030670 Cucumis sativus L. HOM05D007119 ORTHO05D009220 1.1e-161 573.9 474 59.9
CAN.G49.9 Capsicum annuum HOM05D007119 ORTHO05D009220 2.5e-161 572.8 473 59.4
Gorai.005G173800 Gossypium raimondii HOM05D007119 ORTHO05D009220 2.7e-160 569.3 470 60.9
Migut.E00228 Erythranthe guttata HOM05D007119 ORTHO05D009220 6.1e-160 568.2 475 59.4
Nn3g16605 Nelumbo nucifera HOM05D007119 ORTHO05D009220 4.0e-159 565.5 468 60.0
VMungo1383G3713 Vigna mungo HOM05D007119 ORTHO05D009220 6.8e-159 564.7 472 60.0
Gohir.A03G131100 Gossypium hirsutum HOM05D007119 ORTHO05D009220 8.8e-159 564.3 470 60.4
Sabra08G0138500 Salix brachista HOM05D007119 ORTHO05D009220 1.2e-158 563.9 561 53.1
MD16G1107500 Malus domestica HOM05D007119 ORTHO05D009220 1.5e-158 563.5 463 61.6
Sed0010682 Sechium edule HOM05D007119 ORTHO05D009220 2.2e-157 559.7 474 58.0
Cc11_g16270 Coffea canephora HOM05D007119 ORTHO05D009220 6.3e-157 558.1 462 57.8
TAR371G0886 Trochodendron aralioides HOM05D007119 ORTHO05D009220 1.4e-156 557.0 457 60.8
MSTRG.13331 Avicennia marina HOM05D007119 ORTHO05D009220 1.8e-156 556.6 470 59.1
Gohir.A12G146600 Gossypium hirsutum HOM05D007119 ORTHO05D009220 4.1e-156 555.4 480 59.4
DCAR_007027 Daucus carota HOM05D007119 ORTHO05D009220 7.0e-156 554.7 456 60.1
Aa31LG2G6270 Aethionema arabicum HOM05D007119 ORTHO05D009220 2.3e-154 549.7 465 57.4
ATR0824G105 Amborella trichopoda HOM05D007119 ORTHO05D009220 2.9e-154 549.3 474 58.4
PSO017G0770 Papaver somniferum HOM05D007119 ORTHO05D009220 1.5e-153 547.0 469 58.4
Carub.0005s0397 Capsella rubella HOM05D007119 ORTHO05D009220 4.0e-151 538.9 465 57.4
Aqoxy3G01324 Aquilegia oxysepala HOM05D007119 ORTHO05D009220 7.5e-150 534.6 462 55.6
AL5G14790 Arabidopsis lyrata HOM05D007119 ORTHO05D009220 1.4e-148 530.4 465 55.7
AT3G26090 Arabidopsis thaliana HOM05D007119 ORTHO05D009220 1.8e-148 530.0 465 56.1
Solyc05g014160.4 Solanum lycopersicum HOM05D007119 ORTHO05D009220 9.2e-148 527.7 443 59.1
Psat5g093400 Pisum sativum HOM05D007119 ORTHO05D009220 1.2e-147 527.3 407 63.4
FAN22G2246 Fragaria x ananassa HOM05D007119 ORTHO05D009220 1.6e-147 526.9 446 60.8
HanXRQChr12g0372081 Helianthus annuus HOM05D007119 ORTHO05D009220 3.0e-146 522.7 460 56.1
SalBow8G1200 Salvia bowleyana HOM05D007119 ORTHO05D009220 1.1e-145 520.8 447 57.3
Sp2g15290 Schrenkiella parvula HOM05D007119 ORTHO05D009220 9.5e-145 517.7 468 55.3
BcaB07g30623 Brassica carinata HOM05D007119 ORTHO05D009220 1.2e-144 517.3 472 54.2
Lsat_1_v5_gn_8_150440 Lactuca sativa HOM05D007119 ORTHO05D009220 1.6e-144 516.9 471 53.5
CARHR147090 Cardamine hirsuta HOM05D007119 ORTHO05D009220 1.0e-143 514.2 468 54.7
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 1.8e-143 513.5 470 54.7
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 1.8e-143 513.5 470 54.7
BcaC06g33928 Brassica carinata HOM05D007119 ORTHO05D009220 3.1e-143 512.7 470 54.7
BcaC06g31092 Brassica carinata HOM05D007119 ORTHO05D009220 4.0e-143 512.3 468 55.1
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 1.5e-142 510.4 470 54.7
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 3.4e-142 509.2 470 54.5
BraA09t38102Z Brassica rapa HOM05D007119 ORTHO05D009220 3.4e-142 509.2 470 53.8
BcaC04g21404 Brassica carinata HOM05D007119 ORTHO05D009220 4.4e-142 508.8 470 53.6
BolC9t56067H Brassica oleracea HOM05D007119 ORTHO05D009220 4.4e-142 508.8 470 53.6
A09p25150 Brassica napus HOM05D007119 ORTHO05D009220 2.9e-141 506.1 470 53.2
C09p32210 Brassica napus HOM05D007119 ORTHO05D009220 8.3e-141 504.6 468 53.8
Gohir.D02G154800 Gossypium hirsutum HOM05D007119 ORTHO05D009220 4.1e-140 502.3 408 62.5
Nn4g22487 Nelumbo nucifera HOM05D007119 ORTHO05D009220 2.5e-137 493.0 388 63.1
ECA233G0282 Erigeron canadensis HOM05D007119 ORTHO05D009220 4.7e-136 488.8 437 54.5
Lj6C818G13 Lonicera japonica HOM05D007119 ORTHO05D009220 6.8e-135 485.0 447 57.5
ClCG05G026170 Citrullus lanatus HOM05D007119 ORTHO05D009220 2.6e-134 483.0 476 52.9
Peaxi162Scf00128g00648 Petunia axillaris HOM05D007119 ORTHO05D009220 1.1e-132 477.6 384 61.2
Thhalv10004169m.g Eutrema salsugineum HOM05D007119 ORTHO05D009220 8.9e-127 458.0 404 56.4
SGA_v2.0_scaffold87G27113 Striga asiatica HOM05D007119 ORTHO05D009220 1.5e-126 457.2 407 56.8
AUR62005541 Chenopodium quinoa HOM05D007119 ORTHO05D009220 7.6e-118 428.3 320 69.7
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 8.4e-117 424.9 461 49.5
MELO3C011902.2 Cucumis melo HOM05D007119 ORTHO05D009220 2.7e-115 419.9 483 48.4
SEGI_05094 Sequoiadendron giganteum HOM05D007119 ORTHO05D009220 2.0e-110 403.7 410 48.8
Nitab4.5_0002688g0040 Nicotiana tabacum HOM05D007119 ORTHO05D009220 3.8e-109 399.4 345 58.6
Ca_16499_v3 Cicer arietinum L. HOM05D007119 ORTHO05D009220 1.1e-108 397.9 319 62.7
Oeu012665.1 Olea europaea HOM05D007119 ORTHO05D009220 1.4e-108 397.5 316 60.1
Sopen05g009180 Solanum pennellii HOM05D007119 ORTHO05D009220 4.5e-102 375.9 321 59.5
MBI08_g43995_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 6.5e-85 318.9 261 61.3
MBI08_g44099_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 6.5e-85 318.9 261 61.3
AagrBONN_evm.TU.Sc2ySwM_117.1226 Anthoceros agrestis HOM05D001585 ORTHO05D001677 2.4e-79 300.4 436 40.4
SMO165G0024 Selaginella moellendorffii HOM05D007119 ORTHO05D009220 8.5e-69 265.4 366 40.4
PGSC0003DMG401010743 Solanum tuberosum HOM05D007119 ORTHO05D009220 1.4e-58 231.5 189 64.6
Nitab4.5_0000041g0220 Nicotiana tabacum HOM05D007119 ORTHO05D009220 1.8e-58 231.1 210 59.0
HanXRQChr08g0208021 Helianthus annuus HOM05D007119 ORTHO05D009220 3.5e-54 216.9 223 50.7
CANSAT25G1465 Cannabis sativa HOM05D007119 ORTHO05D009220 1.2e-30 138.7 119 57.1
HanXRQChr08g0208031 Helianthus annuus HOM05D007119 ORTHO05D009220 1.9e-23 114.8 102 54.9
Nitab4.5_0002688g0050 Nicotiana tabacum HOM05D007119 ORTHO05D036862 6.0e-14 83.2 68 57.4
Nitab4.5_0000041g0230 Nicotiana tabacum HOM05D007119 ORTHO05D036862 3.0e-13 80.9 68 54.4
Peaxi162Scf00128g00647 Petunia axillaris HOM05D007119 ORTHO05D036862 1.5e-09 68.6 80 42.5


User provided reference genes

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