Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund25392 Selenicereus undatus HOM05D006216 ORTHO05D007760 2.8e-238 828.2 410 100.0
AUR62024257 Chenopodium quinoa HOM05D006216 ORTHO05D007760 9.9e-183 643.7 404 80.4
AUR62005484 Chenopodium quinoa HOM05D006216 ORTHO05D007760 9.6e-170 600.5 361 83.7
EL10Ac6g13846 Beta vulgaris HOM05D006216 ORTHO05D007760 2.1e-169 599.4 405 75.6
Sc04g0009550 Simmondsia chinensis HOM05D006216 ORTHO05D007760 1.6e-164 583.2 398 75.4
MSTRG.12426 Avicennia marina HOM05D006216 ORTHO05D007760 3.0e-163 578.9 402 72.4
QL01p020730 Quercus lobata HOM05D006216 ORTHO05D007760 1.5e-162 576.6 404 73.5
Dinv29341 Davidia involucrata HOM05D006216 ORTHO05D007760 7.4e-162 574.3 395 73.2
CANSAT54G1188 Cannabis sativa HOM05D006216 ORTHO05D007760 1.6e-161 573.2 397 72.3
PGR119G0354 Punica granatum HOM05D006216 ORTHO05D007760 2.1e-161 572.8 395 73.4
Phvul.006G019500 Phaseolus vulgaris HOM05D006216 ORTHO05D007760 4.8e-161 571.6 396 72.7
VMungo1215G0750 Vigna mungo HOM05D006216 ORTHO05D007760 6.2e-161 571.2 396 73.5
CiPaw.13G146100 Carya illinoinensis HOM05D006216 ORTHO05D007760 3.1e-160 568.9 396 72.7
CSS0031944 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 5.3e-160 568.2 403 70.5
SalBow6G4438 Salvia bowleyana HOM05D006216 ORTHO05D007760 5.3e-160 568.2 379 73.1
Glyma.20G046800 Glycine max HOM05D006216 ORTHO05D007760 6.9e-160 567.8 389 73.3
Hma1.2p1_1843F.1_g305010 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 1.5e-159 566.6 393 73.0
MD03G1163100 Malus domestica HOM05D006216 ORTHO05D007760 1.5e-159 566.6 374 75.9
TAR633G2593 Trochodendron aralioides HOM05D006216 ORTHO05D007760 1.5e-159 566.6 393 72.8
Cfa010159 Carpinus fangiana HOM05D006216 ORTHO05D007760 2.0e-159 566.2 384 74.2
Migut.D00703 Erythranthe guttata HOM05D006216 ORTHO05D007760 2.6e-159 565.8 370 74.3
Glyma.13G072700 Glycine max HOM05D006216 ORTHO05D007760 3.4e-159 565.5 389 72.5
Haze_23545 Corylus avellana HOM05D006216 ORTHO05D007760 5.8e-159 564.7 392 73.0
Manes.01G176400 Manihot esculenta HOM05D006216 ORTHO05D007760 5.8e-159 564.7 397 71.8
Actinidia07007 Actinidia chinensis HOM05D006216 ORTHO05D007760 1.0e-158 563.9 368 76.1
Nitab4.5_0002300g0020 Nicotiana tabacum HOM05D006216 ORTHO05D007760 1.0e-158 563.9 366 75.7
Manes.02G134400 Manihot esculenta HOM05D006216 ORTHO05D007760 1.7e-158 563.1 399 71.7
Cc01_g07140 Coffea canephora HOM05D006216 ORTHO05D007760 6.5e-158 561.2 365 75.3
Solyc01g009010.3 Solanum lycopersicum HOM05D006216 ORTHO05D007760 6.5e-158 561.2 336 80.4
RcHm_v2.0_Chr5g0050131 Rosa chinensis HOM05D006216 ORTHO05D007760 8.4e-158 560.8 392 71.9
CAN.G714.2 Capsicum annuum HOM05D006216 ORTHO05D007760 1.9e-157 559.7 341 78.6
Peaxi162Scf00050g02022 Petunia axillaris HOM05D006216 ORTHO05D007760 2.5e-157 559.3 389 72.2
GSVIVG01037382001 Vitis vinifera HOM05D006216 ORTHO05D007760 3.2e-157 558.9 387 71.8
Lj6g0023824 Lotus japonicus HOM05D006216 ORTHO05D007760 5.5e-157 558.1 393 72.0
MELO3C015605.2 Cucumis melo HOM05D006216 ORTHO05D007760 7.1e-157 557.8 374 74.6
Sopen01g004500 Solanum pennellii HOM05D006216 ORTHO05D007760 1.2e-156 557.0 397 70.8
THA.LOC104816956 Tarenaya hassleriana HOM05D006216 ORTHO05D007760 1.6e-156 556.6 397 71.0
PGSC0003DMG400022703 Solanum tuberosum HOM05D006216 ORTHO05D007760 2.1e-156 556.2 409 69.4
Lj2A825T28 Lonicera japonica HOM05D006216 ORTHO05D007760 2.7e-156 555.8 404 69.1
vmacro04357 Vaccinium macrocarpon HOM05D006216 ORTHO05D007760 3.5e-156 555.4 365 75.6
CSS0004136 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 1.0e-155 553.9 394 69.5
Medtr3g437340 Medicago truncatula HOM05D006216 ORTHO05D007760 3.9e-155 552.0 361 75.3
CsaV3_1G041900 Cucumis sativus L. HOM05D006216 ORTHO05D007760 6.7e-155 551.2 394 71.6
TWI31G0496 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 6.7e-155 551.2 373 74.5
Thhalv10002004m.g Eutrema salsugineum HOM05D006216 ORTHO05D007760 1.1e-154 550.4 334 77.5
FvH4_3g27650 Fragaria vesca HOM05D006216 ORTHO05D007760 1.1e-154 550.4 340 78.5
FAN11G0826 Fragaria x ananassa HOM05D006216 ORTHO05D007760 1.1e-154 550.4 340 78.5
TWI75G0612 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 1.1e-154 550.4 399 70.2
FAN21G1147 Fragaria x ananassa HOM05D006216 ORTHO05D007760 1.5e-154 550.1 340 78.5
TPR.G11861 Trifolium pratense HOM05D006216 ORTHO05D007760 1.5e-154 550.1 388 71.4
Potri.001G225100 Populus trichocarpa HOM05D006216 ORTHO05D007760 1.9e-154 549.7 397 70.5
ECA238G2733 Erigeron canadensis HOM05D006216 ORTHO05D007760 2.5e-154 549.3 396 69.7
Eucgr.J00662 Eucalyptus grandis HOM05D006216 ORTHO05D007760 2.5e-154 549.3 343 77.0
arahy.Tifrunner.gnm1.ann1.G3L2E7 Arachis hypogaea HOM05D006216 ORTHO05D007760 3.3e-154 548.9 391 71.9
FAN25G0225 Fragaria x ananassa HOM05D006216 ORTHO05D007760 3.3e-154 548.9 340 78.5
Gohir.D07G123300 Gossypium hirsutum HOM05D006216 ORTHO05D007760 5.7e-154 548.1 393 71.8
Nn7g37015 Nelumbo nucifera HOM05D006216 ORTHO05D007760 5.7e-154 548.1 364 73.1
PSO339G5720 Papaver somniferum HOM05D006216 ORTHO05D007760 5.7e-154 548.1 364 75.5
Thecc.09G251000 Theobroma cacao HOM05D006216 ORTHO05D007760 7.4e-154 547.7 391 71.6
Ca_13675_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 9.6e-154 547.4 388 70.9
Lsat_1_v5_gn_2_36221 Lactuca sativa HOM05D006216 ORTHO05D007760 9.6e-154 547.4 367 71.9
Gohir.A07G119000 Gossypium hirsutum HOM05D006216 ORTHO05D007760 1.6e-153 546.6 392 71.4
Potri.009G021800 Populus trichocarpa HOM05D006216 ORTHO05D007760 2.1e-153 546.2 388 71.6
A07p17910 Brassica napus HOM05D006216 ORTHO05D007760 2.8e-153 545.8 365 72.9
BraA07t29509Z Brassica rapa HOM05D006216 ORTHO05D007760 2.8e-153 545.8 365 72.9
arahy.Tifrunner.gnm1.ann1.CPM77E Arachis hypogaea HOM05D006216 ORTHO05D007760 3.7e-153 545.4 341 78.9
HanXRQChr14g0433421 Helianthus annuus HOM05D006216 ORTHO05D007760 3.7e-153 545.4 396 69.4
Sed0006982 Sechium edule HOM05D006216 ORTHO05D007760 3.7e-153 545.4 377 72.9
Lalb_Chr15g0080191 Lupinus albus HOM05D006216 ORTHO05D007760 8.2e-153 544.3 391 70.1
PSO384G3582 Papaver somniferum HOM05D006216 ORTHO05D007760 1.4e-152 543.5 364 74.5
Gorai.001G133000 Gossypium raimondii HOM05D006216 ORTHO05D007760 2.4e-152 542.7 396 71.2
Sp4g08430 Schrenkiella parvula HOM05D006216 ORTHO05D007760 3.1e-152 542.3 364 72.0
Lalb_Chr18g0048331 Lupinus albus HOM05D006216 ORTHO05D007760 4.0e-152 542.0 388 70.4
BcaC02g10847 Brassica carinata HOM05D006216 ORTHO05D007760 5.3e-152 541.6 365 72.1
C04p24560 Brassica napus HOM05D006216 ORTHO05D007760 5.3e-152 541.6 365 72.1
BolC4t23960H Brassica oleracea HOM05D006216 ORTHO05D007760 5.3e-152 541.6 365 71.8
CARHR119100 Cardamine hirsuta HOM05D006216 ORTHO05D007760 5.3e-152 541.6 334 76.6
Duzib168G1114 Durio zibethinus HOM05D006216 ORTHO05D007760 5.3e-152 541.6 339 79.9
AL4G20170 Arabidopsis lyrata HOM05D006216 ORTHO05D007760 9.0e-152 540.8 361 72.3
Carub.0004s0743 Capsella rubella HOM05D006216 ORTHO05D007760 9.0e-152 540.8 381 69.8
Ciclev10015579m.g Citrus clementina HOM05D006216 ORTHO05D007760 1.2e-151 540.4 383 71.5
AT2G26930 Arabidopsis thaliana HOM05D006216 ORTHO05D007760 2.0e-151 539.7 361 71.5
BcaB02g10053 Brassica carinata HOM05D006216 ORTHO05D007760 3.4e-151 538.9 348 74.7
Psat5g182280 Pisum sativum HOM05D006216 ORTHO05D007760 1.7e-150 536.6 342 76.6
MSTRG.21323 Avicennia marina HOM05D006216 ORTHO05D007760 3.8e-150 535.4 392 68.1
SGA_v2.0_scaffold79G25547 Striga asiatica HOM05D006216 ORTHO05D007760 1.4e-149 533.5 424 65.3
Sabra16G0133700 Salix brachista HOM05D006216 ORTHO05D007760 4.2e-149 531.9 449 62.8
ATR0782G058 Amborella trichopoda HOM05D006216 ORTHO05D007760 7.1e-149 531.2 339 74.0
Aqoxy1G00047 Aquilegia oxysepala HOM05D006216 ORTHO05D007760 7.1e-149 531.2 370 70.0
Rhsim13G0202500 Rhododendron simsii HOM05D006216 ORTHO05D007760 7.1e-149 531.2 403 68.0
Os01g0802100 Oryza sativa ssp. japonica HOM05D006216 ORTHO05D007760 7.9e-148 527.7 384 68.0
Zm00001eb150630 Zea mays HOM05D006216 ORTHO05D007760 1.3e-147 526.9 330 74.8
Aa31LG5G8850 Aethionema arabicum HOM05D006216 ORTHO05D007760 1.1e-146 523.9 386 67.1
ClCG03G014320 Citrullus lanatus HOM05D006216 ORTHO05D007760 2.8e-145 519.2 374 70.6
CDE08G0663 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 4.5e-143 511.9 370 70.0
Migut.N02401 Erythranthe guttata HOM05D006216 ORTHO05D007760 4.5e-143 511.9 305 81.6
Atru.BG.104.p Acer truncatum HOM05D006216 ORTHO05D007760 2.1e-140 503.1 299 82.6
Nitab4.5_0000428g0050 Nicotiana tabacum HOM05D006216 ORTHO05D007760 1.1e-138 497.3 335 73.7
CDE09G0516 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 9.7e-138 494.2 354 70.9
DCAR_006327 Daucus carota HOM05D006216 ORTHO05D007760 2.4e-136 489.6 330 75.2
unitig_27.g25131 Utricularia gibba HOM05D006216 ORTHO05D007760 1.3e-134 483.8 398 64.8
HPP92_001661 Vanilla planifolia HOM05D006216 ORTHO05D007760 2.9e-134 482.6 355 68.2
Pp3c26_490 Physcomitrium patens HOM05D006216 ORTHO05D007760 3.0e-131 472.6 324 69.8
Atru.chr3.2830 Acer truncatum HOM05D006216 ORTHO05D007760 6.7e-131 471.5 347 71.5
SMO367G1046 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.5e-125 453.8 323 66.6
Mapoly0033s0031 Marchantia polymorpha HOM05D006216 ORTHO05D007760 1.8e-123 446.8 346 62.1
CBR_g22270 Chara braunii HOM05D006216 ORTHO05D007760 4.4e-122 442.2 322 65.5
Hma1.2p1_1843F.1_g305000 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 9.1e-120 434.5 313 70.9
MBI19_g37419_MAGBIO Magnolia biondii HOM05D006216 ORTHO05D007760 8.0e-108 394.8 323 61.9
AagrBONN_evm.TU.Sc2ySwM_228.3849 Anthoceros agrestis HOM05D006216 ORTHO05D007760 8.8e-107 391.3 285 67.4
Prupe.4G269400 Prunus persica HOM05D006216 ORTHO05D007760 9.5e-101 371.3 276 68.5
MCO08G209 Micromonas commoda HOM05D006216 ORTHO05D007760 1.2e-87 327.8 303 54.8
Cre02.g145050 Chlamydomonas reinhardtii HOM05D006216 ORTHO05D007760 7.8e-87 325.1 291 55.3
PRCOL_00004294 Prasinoderma coloniale HOM05D006216 ORTHO05D007760 2.3e-83 313.5 302 50.0
Hund17544 Selenicereus undatus HOM05D006216 ORTHO05D007760 4.1e-80 302.8 197 80.7
Sabra09G0013700 Salix brachista HOM05D006216 ORTHO05D007760 1.3e-78 297.7 304 56.2
SEGI_15556 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 7.8e-71 271.9 199 65.3
Glyma.17G179800 Glycine max HOM05D006216 ORTHO05D007760 4.7e-68 262.7 181 76.2
SEGI_04634 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 6.0e-47 192.6 130 68.5
FAN26G0546 Fragaria x ananassa HOM05D006216 ORTHO05D010609 6.7e-38 162.5 114 69.3
SMO332G0003 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 2.7e-31 140.6 102 64.7
Hund00952 Selenicereus undatus HOM05D006216 ORTHO05D007760 2.8e-28 130.6 106 68.9
SMO332G0042 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 2.6e-26 124.0 105 59.0
Oeu063625.1 Olea europaea HOM05D006216 ORTHO05D007760 2.3e-22 110.9 129 49.6
Ca_29165_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 4.1e-19 100.1 184 35.9
SMO198G0007 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 5.0e-17 93.2 106 47.2
DCAR_006325 Daucus carota HOM05D006216 ORTHO05D007760 4.7e-15 86.7 50 76.0


User provided reference genes

Program Settings