Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund25388 Selenicereus undatus HOM05D002002 ORTHO05D008797 0.0e+00 1533.9 957 100.0
AUR62005461 Chenopodium quinoa HOM05D002002 ORTHO05D008797 3.0e-198 696.4 731 55.4
EL10Ac6g13807 Beta vulgaris HOM05D002002 ORTHO05D008797 1.5e-189 667.5 937 52.4
AUR62024280 Chenopodium quinoa HOM05D002002 ORTHO05D008797 2.6e-186 656.8 739 52.5
Dinv15235 Davidia involucrata HOM05D002002 ORTHO05D008797 1.2e-141 508.4 933 42.7
Dinv24786 Davidia involucrata HOM05D002002 ORTHO05D008797 1.4e-123 448.4 859 39.7
Atru.chr11.2102 Acer truncatum HOM05D002002 ORTHO05D008797 3.2e-123 447.2 905 43.6
Cfa009210 Carpinus fangiana HOM05D002002 ORTHO05D008797 1.1e-112 412.1 929 39.1
GSVIVG01005756001 Vitis vinifera HOM05D002002 ORTHO05D008797 1.6e-111 408.3 583 48.4
Ciclev10030634m.g Citrus clementina HOM05D002002 ORTHO05D008797 2.0e-109 401.4 914 40.2
CiPaw.05G182600 Carya illinoinensis HOM05D002002 ORTHO05D008797 4.3e-104 383.6 913 40.4
Manes.13G024600 Manihot esculenta HOM05D002002 ORTHO05D008797 8.1e-103 379.4 918 36.9
Sc11g0000970 Simmondsia chinensis HOM05D002002 ORTHO05D008797 8.1e-103 379.4 951 38.1
Haze_12247 Corylus avellana HOM05D002002 ORTHO05D008711 1.1e-102 379.0 941 35.7
Actinidia15094 Actinidia chinensis HOM05D002002 ORTHO05D008797 1.9e-99 368.2 985 36.0
CsaV3_5G031140 Cucumis sativus L. HOM05D002002 ORTHO05D008797 5.4e-99 366.7 1004 34.7
Nitab4.5_0000007g0090 Nicotiana tabacum HOM05D002002 ORTHO05D008797 9.3e-99 365.9 899 38.8
Cpa.g.sc33.18 Carica papaya HOM05D002002 ORTHO05D008797 2.7e-98 364.4 777 39.0
Potri.010G046000 Populus trichocarpa HOM05D002002 ORTHO05D008797 2.7e-98 364.4 915 37.5
Glyma.18G143900 Glycine max HOM05D002002 ORTHO05D008797 2.3e-97 361.3 921 35.1
CSS0037172 Camellia sinensis var. sinensis HOM05D002002 ORTHO05D008797 5.1e-97 360.1 999 35.7
MELO3C011952.2 Cucumis melo HOM05D002002 ORTHO05D008711 6.7e-97 359.8 935 34.7
Thecc.02G259600 Theobroma cacao HOM05D002002 ORTHO05D008797 6.7e-97 359.8 796 40.6
RcHm_v2.0_Chr4g0432951 Rosa chinensis HOM05D002002 ORTHO05D008797 4.3e-96 357.1 763 39.1
Duzib248G0209 Durio zibethinus HOM05D002002 ORTHO05D008797 1.6e-95 355.1 920 35.5
QL03p058108 Quercus lobata HOM05D002002 ORTHO05D008797 1.4e-94 352.1 707 40.9
MD16G1102300 Malus domestica HOM05D002002 ORTHO05D008797 9.0e-94 349.4 892 37.2
TAR374G0715 Trochodendron aralioides HOM05D002002 ORTHO05D008797 7.6e-93 346.3 905 38.0
Lalb_Chr16g0392181 Lupinus albus HOM05D002002 ORTHO05D008797 9.9e-93 345.9 953 36.2
Phvul.003G065200 Phaseolus vulgaris HOM05D002002 ORTHO05D008797 1.3e-92 345.5 967 36.1
FAN17G1038 Fragaria x ananassa HOM05D002002 ORTHO05D008711 3.8e-92 344.0 865 37.8
Duzib251G0042 Durio zibethinus HOM05D002002 ORTHO05D008797 7.1e-91 339.7 929 38.3
Gohir.D04G179800 Gossypium hirsutum HOM05D002002 ORTHO05D008797 1.6e-90 338.6 926 37.5
Gorai.012G173000 Gossypium raimondii HOM05D002002 ORTHO05D008797 1.6e-90 338.6 926 37.5
ClCG05G025730 Citrullus lanatus HOM05D002002 ORTHO05D008797 4.6e-90 337.0 892 33.7
FvH4_4g25541 Fragaria vesca HOM05D002002 ORTHO05D008797 1.0e-89 335.9 759 38.6
CANSAT01G0132 Cannabis sativa HOM05D002002 ORTHO05D008797 5.1e-89 333.6 900 37.6
Nitab4.5_0009240g0010 Nicotiana tabacum HOM05D002002 ORTHO05D008797 8.7e-89 332.8 695 39.3
Sabra08G0141500 Salix brachista HOM05D002002 ORTHO05D008797 1.1e-88 332.4 905 36.2
Eucgr.H02500 Eucalyptus grandis HOM05D002002 ORTHO05D008797 2.1e-87 328.2 929 33.4
Sed0005394 Sechium edule HOM05D002002 ORTHO05D008797 4.0e-86 323.9 875 34.1
Gohir.A04G136700 Gossypium hirsutum HOM05D002002 ORTHO05D008797 6.9e-86 323.2 760 36.2
Peaxi162Scf00128g00134 Petunia axillaris HOM05D002002 ORTHO05D008797 4.5e-85 320.5 947 36.2
CAN.G832.3 Capsicum annuum HOM05D002002 ORTHO05D008797 1.7e-84 318.5 843 37.8
Potri.008G186900 Populus trichocarpa HOM05D002002 ORTHO05D008797 7.9e-82 309.7 863 35.7
Sopen05g008360 Solanum pennellii HOM05D002002 ORTHO05D008797 1.0e-81 309.3 943 37.8
arahy.Tifrunner.gnm1.ann1.PHTA8N Arachis hypogaea HOM05D002002 ORTHO05D008711 1.9e-80 305.1 850 35.4
Migut.K00597 Erythranthe guttata HOM05D002002 ORTHO05D008797 7.4e-80 303.1 951 35.3
Aqoxy3G01206 Aquilegia oxysepala HOM05D002002 ORTHO05D008797 1.1e-75 289.3 939 34.3
Oeu059906.4 Olea europaea HOM05D002002 ORTHO05D008797 1.1e-75 289.3 792 33.8
PGR119G0425 Punica granatum HOM05D002002 ORTHO05D008797 4.2e-75 287.3 915 35.6
Nn3g16709 Nelumbo nucifera HOM05D002002 ORTHO05D008797 2.1e-74 285.0 1031 31.5
Nn4g22624 Nelumbo nucifera HOM05D002002 ORTHO05D008797 4.6e-74 283.9 1037 33.9
ECA233G4520 Erigeron canadensis HOM05D002002 ORTHO05D008797 1.8e-73 282.0 958 33.7
Lj4g0017193 Lotus japonicus HOM05D002002 ORTHO05D008797 3.9e-73 280.8 849 34.9
MD13G1101700 Malus domestica HOM05D002002 ORTHO05D008797 3.9e-73 280.8 852 36.7
DCAR_031153 Daucus carota HOM05D002002 ORTHO05D008797 1.5e-72 278.9 766 35.5
Ca_22584_v3 Cicer arietinum L. HOM05D002002 ORTHO05D008711 5.7e-72 276.9 825 33.2
PSO017G3282 Papaver somniferum HOM05D002002 ORTHO05D008797 7.4e-72 276.6 923 33.3
arahy.Tifrunner.gnm1.ann1.YSSX7I Arachis hypogaea HOM05D002002 ORTHO05D008797 1.3e-71 275.8 859 32.7
FAN22G2309 Fragaria x ananassa HOM05D002002 ORTHO05D008797 2.2e-71 275.0 615 38.7
Oeu029877.3 Olea europaea HOM05D002002 ORTHO05D008797 2.4e-70 271.6 804 35.1
TWI75G1475 Tripterygium wilfordii HOM05D002002 ORTHO05D008797 5.3e-70 270.4 933 31.5
vmacro16196 Vaccinium macrocarpon HOM05D002002 ORTHO05D008797 7.7e-69 266.5 722 34.5
Lalb_Chr05g0228431 Lupinus albus HOM05D002002 ORTHO05D008797 6.5e-68 263.5 856 32.7
TAR622G0079 Trochodendron aralioides HOM05D002002 ORTHO05D008797 8.5e-68 263.1 743 33.0
Psat4g115320 Pisum sativum HOM05D002002 ORTHO05D008797 1.4e-67 262.3 911 32.7
COL.COLO4_24277 Corchorus olitorius HOM05D002002 ORTHO05D008797 1.9e-67 261.9 719 37.6
Glyma.08G282400 Glycine max HOM05D002002 ORTHO05D008797 1.9e-67 261.9 921 32.7
Prupe.1G244100 Prunus persica HOM05D002002 ORTHO05D008797 2.6e-64 251.5 690 40.3
TPR.G17755 Trifolium pratense HOM05D002002 ORTHO05D008711 2.8e-63 248.1 542 39.1
SalBow2G1965 Salvia bowleyana HOM05D002002 ORTHO05D008797 1.0e-60 239.6 744 34.0
ATR0824G114 Amborella trichopoda HOM05D002002 ORTHO05D008797 1.7e-60 238.8 756 32.7
DCAR_007056 Daucus carota HOM05D002002 ORTHO05D008797 1.7e-60 238.8 837 31.5
SGA_v2.0_scaffold476G52131 Striga asiatica HOM05D002002 ORTHO05D008797 1.7e-60 238.8 701 35.2
PSO478G2109 Papaver somniferum HOM05D002002 ORTHO05D008797 6.5e-60 236.9 906 32.7
HanXRQChr08g0208141 Helianthus annuus HOM05D002002 ORTHO05D008797 1.4e-59 235.7 693 32.5
Lsat_1_v5_gn_8_152141 Lactuca sativa HOM05D002002 ORTHO05D008711 3.2e-59 234.6 955 30.3
Rhsim12G0110400 Rhododendron simsii HOM05D002002 ORTHO05D008797 9.7e-56 223.0 523 37.3
Cc11_g15720 Coffea canephora HOM05D002002 ORTHO05D008797 5.3e-54 217.2 891 33.6
AL2G30050 Arabidopsis lyrata HOM05D002002 ORTHO05D008797 2.6e-53 214.9 830 31.1
Aa31LG4G10340 Aethionema arabicum HOM05D002002 ORTHO05D008711 5.5e-51 207.2 836 30.3
SEGI_21221 Sequoiadendron giganteum HOM05D002002 ORTHO05D008797 5.5e-51 207.2 775 31.4
SGA_v2.0_scaffold98G29360 Striga asiatica HOM05D002002 ORTHO05D008797 7.7e-45 186.8 434 37.3
Sp5g25780 Schrenkiella parvula HOM05D002002 ORTHO05D008797 3.2e-43 181.4 915 29.7
SEGI_37990 Sequoiadendron giganteum HOM05D002002 ORTHO05D008797 7.2e-43 180.3 710 30.4
CARHR063850 Cardamine hirsuta HOM05D002002 ORTHO05D008797 4.4e-40 171.0 821 29.0
unitig_26.g10348 Utricularia gibba HOM05D002002 ORTHO05D008797 1.4e-38 166.0 880 28.9
Os04g0661700 Oryza sativa ssp. japonica HOM05D002002 ORTHO05D008797 2.4e-38 165.2 891 28.4
HPP92_005414 Vanilla planifolia HOM05D002002 ORTHO05D008797 6.5e-36 157.1 896 28.3
Thhalv10018098m.g Eutrema salsugineum HOM05D002002 ORTHO05D008797 8.6e-36 156.8 987 30.8
AT1G70620 Arabidopsis thaliana HOM05D002002 ORTHO05D008797 1.5e-35 156.0 510 33.1
CDE07G1782 Ceratophyllum demersum HOM05D002002 ORTHO05D008797 7.2e-35 153.7 726 30.3
BcaC03g15213 Brassica carinata HOM05D002002 ORTHO05D008797 1.7e-31 142.5 423 32.4
C02p28000 Brassica napus HOM05D002002 ORTHO05D008797 1.7e-31 142.5 423 32.4
TPR.G3029 Trifolium pratense HOM05D002002 ORTHO05D008797 5.4e-30 137.5 477 30.2
A02p16740 Brassica napus HOM05D002002 ORTHO05D008797 1.0e-28 133.3 892 26.9
Lj6A812T43 Lonicera japonica HOM05D002002 ORTHO05D008797 1.0e-28 133.3 362 32.3
Carub.0002s1735 Capsella rubella HOM05D002002 ORTHO05D008797 2.9e-28 131.7 503 30.4
BolC2t08843H Brassica oleracea HOM05D002002 ORTHO05D008797 3.3e-27 128.3 564 26.8
BraA02t06728Z Brassica rapa HOM05D002002 ORTHO05D008797 5.6e-27 127.5 832 26.0
Pp3c22_14720 Physcomitrium patens HOM05D002002 ORTHO05D008797 2.9e-23 115.2 505 30.1
TPR.G3025 Trifolium pratense HOM05D002002 ORTHO05D008797 3.7e-23 114.8 287 34.1
unitig_26.g10410 Utricularia gibba HOM05D002002 ORTHO05D008797 1.0e-20 106.7 194 42.8
Sed0026296 Sechium edule HOM05D002002 ORTHO05D008797 1.5e-19 102.8 385 32.7
BcaB05g24599 Brassica carinata HOM05D002002 ORTHO05D008797 5.6e-19 100.9 727 26.0
Mapoly0026s0020 Marchantia polymorpha HOM05D002002 ORTHO05D008797 1.3e-15 89.7 315 33.0
TPR.G2569 Trifolium pratense HOM05D002002 ORTHO05D008797 1.7e-15 89.4 147 44.2
Zm00001eb067460 Zea mays HOM05D002002 ORTHO05D008797 3.2e-14 85.1 553 27.5
Solyc05g013490.4 Solanum lycopersicum HOM05D002002 ORTHO05D008797 7.0e-14 84.0 264 33.3
TPR.G1066 Trifolium pratense HOM05D002002 ORTHO05D008797 2.3e-09 68.9 110 42.7
GSVIVG01005755001 Vitis vinifera HOM05D002002 ORTHO05D008797 3.4e-08 65.1 87 48.3
Lsat_1_v5_gn_0_41981 Lactuca sativa HOM05D002002 ORTHO05D008797 2.9e-07 62.0 97 39.2


User provided reference genes

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