Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund25274 Selenicereus undatus HOM05D006025 ORTHO05D008547 9.7e-173 610.1 328 100.0
EL10Ac6g13142 Beta vulgaris HOM05D006025 ORTHO05D008547 1.9e-112 409.8 337 72.1
Prupe.1G267200 Prunus persica HOM05D006025 ORTHO05D008547 1.2e-98 364.0 309 68.0
Sc11g0001660 Simmondsia chinensis HOM05D006025 ORTHO05D008547 1.6e-98 363.6 325 64.3
Actinidia31175 Actinidia chinensis HOM05D006025 ORTHO05D008547 2.3e-97 359.8 317 66.9
Dinv34195 Davidia involucrata HOM05D006025 ORTHO05D008547 3.9e-97 359.0 336 65.2
FvH4_4g32070 Fragaria vesca HOM05D006025 ORTHO05D008547 1.1e-96 357.5 308 67.5
FAN22G0508 Fragaria x ananassa HOM05D006025 ORTHO05D008547 7.3e-96 354.8 308 67.2
COL.COLO4_36182 Corchorus olitorius HOM05D006025 ORTHO05D008547 2.1e-95 353.2 288 68.8
FAN12G1990 Fragaria x ananassa HOM05D006025 ORTHO05D008547 4.8e-95 352.1 308 67.2
CAN.G27.7 Capsicum annuum HOM05D006025 ORTHO05D008547 6.2e-95 351.7 334 62.6
FAN07G0827 Fragaria x ananassa HOM05D006025 ORTHO05D008547 6.2e-95 351.7 307 67.4
Medtr5g037600 Medicago truncatula HOM05D006025 ORTHO05D008547 6.2e-95 351.7 318 63.5
Manes.05G096000 Manihot esculenta HOM05D006025 ORTHO05D008547 1.8e-94 350.1 264 71.2
MD13G1079600 Malus domestica HOM05D006025 ORTHO05D008547 6.9e-94 348.2 330 60.6
MD16G1079500 Malus domestica HOM05D006025 ORTHO05D008547 6.9e-94 348.2 320 62.2
Thecc.02G232800 Theobroma cacao HOM05D006025 ORTHO05D008547 1.2e-93 347.4 277 69.0
Glyma.01G040500 Glycine max HOM05D006025 ORTHO05D008547 3.4e-93 345.9 324 63.6
PGR119G0173 Punica granatum HOM05D006025 ORTHO05D008547 5.8e-93 345.1 238 78.2
Nitab4.5_0000679g0100 Nicotiana tabacum HOM05D006025 ORTHO05D008547 7.6e-93 344.7 257 72.8
SalBow8G3437 Salvia bowleyana HOM05D006025 ORTHO05D008547 9.9e-93 344.4 311 64.6
Lj6A795T74 Lonicera japonica HOM05D006025 ORTHO05D008547 1.3e-92 344.0 264 70.8
RcHm_v2.0_Chr4g0440761 Rosa chinensis HOM05D006025 ORTHO05D008547 1.7e-92 343.6 271 69.4
Sed0022227 Sechium edule HOM05D006025 ORTHO05D008547 1.7e-92 343.6 236 78.4
CANSAT78G1034 Cannabis sativa HOM05D006025 ORTHO05D008547 2.2e-92 343.2 321 62.9
Lj2g0002167 Lotus japonicus HOM05D006025 ORTHO05D008547 2.9e-92 342.8 277 70.8
MELO3C012062.2 Cucumis melo HOM05D006025 ORTHO05D008547 3.8e-92 342.4 240 76.7
CsaV3_5G032300 Cucumis sativus L. HOM05D006025 ORTHO05D008547 4.9e-92 342.0 301 66.1
Cfa009042 Carpinus fangiana HOM05D006025 ORTHO05D008547 8.4e-92 341.3 256 73.8
Ciclev10032129m.g Citrus clementina HOM05D006025 ORTHO05D008547 8.4e-92 341.3 326 60.1
Migut.L01348 Erythranthe guttata HOM05D006025 ORTHO05D008547 1.1e-91 340.9 261 71.3
ClCG05G024630 Citrullus lanatus HOM05D006025 ORTHO05D008547 3.2e-91 339.3 330 62.1
Ah.03g132040 Amaranthus hybridus HOM05D006025 ORTHO05D008547 5.4e-91 338.6 239 76.6
Phvul.002G080900 Phaseolus vulgaris HOM05D006025 ORTHO05D008547 9.3e-91 337.8 310 63.5
TAR481G0011 Trochodendron aralioides HOM05D006025 ORTHO05D008547 1.6e-90 337.0 303 61.7
Rhsim12G0129700 Rhododendron simsii HOM05D006025 ORTHO05D008547 2.1e-90 336.7 332 60.5
GSVIVG01020079001 Vitis vinifera HOM05D006025 ORTHO05D008547 2.7e-90 336.3 328 59.5
CiPaw.05G140400 Carya illinoinensis HOM05D006025 ORTHO05D008547 4.6e-90 335.5 237 78.1
Migut.E00118 Erythranthe guttata HOM05D006025 ORTHO05D008547 1.0e-89 334.3 326 60.4
Atru.chr11.1861 Acer truncatum HOM05D006025 ORTHO05D008547 1.3e-89 334.0 237 75.5
QL03p065944 Quercus lobata HOM05D006025 ORTHO05D008547 1.7e-89 333.6 324 63.6
Gorai.009G347000 Gossypium raimondii HOM05D006025 ORTHO05D008547 3.0e-89 332.8 273 65.9
Sopen05g002930 Solanum pennellii HOM05D006025 ORTHO05D008547 5.1e-89 332.0 303 65.3
arahy.Tifrunner.gnm1.ann1.1ZL8TB Arachis hypogaea HOM05D006025 ORTHO05D008547 6.6e-89 331.6 235 75.3
Cc11_g13550 Coffea canephora HOM05D006025 ORTHO05D008547 8.7e-89 331.3 323 61.6
arahy.Tifrunner.gnm1.ann1.V5YJYF Arachis hypogaea HOM05D006025 ORTHO05D008547 1.5e-88 330.5 235 75.3
Gohir.D05G323300 Gossypium hirsutum HOM05D006025 ORTHO05D008547 1.9e-88 330.1 271 66.1
Lalb_Chr05g0217521 Lupinus albus HOM05D006025 ORTHO05D008547 1.9e-88 330.1 282 63.1
Gohir.A05G321100 Gossypium hirsutum HOM05D006025 ORTHO05D008547 2.5e-88 329.7 329 57.8
TWI18G0579 Tripterygium wilfordii HOM05D006025 ORTHO05D008547 2.5e-88 329.7 325 59.4
TPR.G26717 Trifolium pratense HOM05D006025 ORTHO05D008547 3.3e-88 329.3 324 58.6
VMungo1215G1908 Vigna mungo HOM05D006025 ORTHO05D008547 3.3e-88 329.3 292 64.0
Sabra10G0030400 Salix brachista HOM05D006025 ORTHO05D008547 1.6e-87 327.0 261 69.3
AUR62026262 Chenopodium quinoa HOM05D006025 ORTHO05D008547 6.2e-87 325.1 210 81.9
Ca_04692_v3 Cicer arietinum L. HOM05D006025 ORTHO05D008547 6.9e-86 321.6 331 55.9
BcaC06g34048 Brassica carinata HOM05D006025 ORTHO05D008547 9.0e-86 321.2 320 59.1
Potri.010G034400 Populus trichocarpa HOM05D006025 ORTHO05D008547 9.0e-86 321.2 256 69.5
Cpa.g.sc73.14 Carica papaya HOM05D006025 ORTHO05D008547 1.2e-85 320.9 248 70.2
HanXRQChr15g0478181 Helianthus annuus HOM05D006025 ORTHO05D008547 1.2e-85 320.9 311 59.5
vmacro16324 Vaccinium macrocarpon HOM05D006025 ORTHO05D008547 2.6e-85 319.7 373 53.6
C07p33300 Brassica napus HOM05D006025 ORTHO05D008547 3.4e-85 319.3 317 59.0
Aqoxy3G00786 Aquilegia oxysepala HOM05D006025 ORTHO05D008547 4.5e-85 318.9 326 56.4
BcaC06g31223 Brassica carinata HOM05D006025 ORTHO05D008547 5.8e-85 318.5 323 59.4
Oeu044566.1 Olea europaea HOM05D006025 ORTHO05D008547 5.8e-85 318.5 294 60.9
PGSC0003DMG400017619 Solanum tuberosum HOM05D006025 ORTHO05D008547 5.8e-85 318.5 313 62.3
AL5G11850 Arabidopsis lyrata HOM05D006025 ORTHO05D008547 7.6e-85 318.2 228 74.6
Carub.0005s0158 Capsella rubella HOM05D006025 ORTHO05D008547 7.6e-85 318.2 228 75.0
Lsat_1_v5_gn_3_49700 Lactuca sativa HOM05D006025 ORTHO05D008547 1.3e-84 317.4 280 63.6
BolC7t43841H Brassica oleracea HOM05D006025 ORTHO05D008547 1.7e-84 317.0 328 58.5
Thhalv10004613m.g Eutrema salsugineum HOM05D006025 ORTHO05D008547 1.7e-84 317.0 275 65.1
AT2G02590 Arabidopsis thaliana HOM05D006025 ORTHO05D008547 2.2e-84 316.6 228 74.6
A09p23920 Brassica napus HOM05D006025 ORTHO05D008547 2.2e-84 316.6 232 72.8
DCAR_024490 Daucus carota HOM05D006025 ORTHO05D008547 2.9e-84 316.2 202 81.2
THA.LOC104805137 Tarenaya hassleriana HOM05D000131 ORTHO05D000086 2.9e-84 316.2 233 72.1
BraA09t37996Z Brassica rapa HOM05D006025 ORTHO05D008547 3.8e-84 315.8 232 72.8
Duzib268G1145 Durio zibethinus HOM05D006025 ORTHO05D008547 4.9e-84 315.5 260 68.1
Sp2g13810 Schrenkiella parvula HOM05D006025 ORTHO05D008547 6.4e-84 315.1 232 73.3
HanXRQChr17g0544581 Helianthus annuus HOM05D006025 ORTHO05D008547 1.1e-83 314.3 249 67.5
A06p43550 Brassica napus HOM05D006025 ORTHO05D008547 1.4e-83 313.9 228 73.7
BraA06t27240Z Brassica rapa HOM05D006025 ORTHO05D008547 1.4e-83 313.9 228 73.7
Nn4g23031 Nelumbo nucifera HOM05D006025 ORTHO05D008547 5.5e-83 312.0 312 60.6
Psat2g115440 Pisum sativum HOM05D006025 ORTHO05D008547 2.7e-82 309.7 284 62.0
AUR62026454 Chenopodium quinoa HOM05D006025 ORTHO05D008547 7.9e-82 308.1 217 77.9
MSTRG.7831 Avicennia marina HOM05D006025 ORTHO05D008547 1.3e-81 307.4 263 67.3
Nitab4.5_0002969g0040 Nicotiana tabacum HOM05D006025 ORTHO05D008547 1.3e-81 307.4 246 69.1
BcaC04g21520 Brassica carinata HOM05D006025 ORTHO05D008547 1.8e-81 307.0 298 61.1
CSS0050443 Camellia sinensis var. sinensis HOM05D006025 ORTHO05D008547 2.3e-81 306.6 198 78.3
C09p30780 Brassica napus HOM05D006025 ORTHO05D008547 1.9e-80 303.5 225 73.3
Peaxi162Scf00209g00517 Petunia axillaris HOM05D006025 ORTHO05D008547 1.9e-80 303.5 319 57.1
Aa31LG2G7560 Aethionema arabicum HOM05D006025 ORTHO05D008547 2.5e-80 303.1 228 71.1
ATR0665G167 Amborella trichopoda HOM05D006025 ORTHO05D008547 3.3e-80 302.8 232 69.4
ECA246G2177 Erigeron canadensis HOM05D006025 ORTHO05D008547 1.3e-79 300.8 209 74.6
MBI04_g22196_MAGBIO Magnolia biondii HOM05D006025 ORTHO05D008547 1.3e-79 300.8 196 76.0
CARHR145110 Cardamine hirsuta HOM05D006025 ORTHO05D008547 1.6e-79 300.4 228 71.9
BolC9t55941H Brassica oleracea HOM05D006025 ORTHO05D008547 2.8e-79 299.7 216 74.5
PSO478G1322 Papaver somniferum HOM05D006025 ORTHO05D008547 4.8e-79 298.9 267 63.7
SGA_v2.0_scaffold87G26972 Striga asiatica HOM05D006025 ORTHO05D008547 3.4e-77 292.7 335 52.2
Haze_12072 Corylus avellana HOM05D006025 ORTHO05D008547 4.5e-77 292.4 230 71.7
Eucgr.B02589 Eucalyptus grandis HOM05D006025 ORTHO05D008547 7.6e-77 291.6 206 74.8
unitig_62.g23684 Utricularia gibba HOM05D006025 ORTHO05D008547 2.9e-76 289.7 302 56.0
Os03g0800500 Oryza sativa ssp. japonica HOM05D006025 ORTHO05D008547 4.9e-76 288.9 203 73.4
BcaB07g30697 Brassica carinata HOM05D006025 ORTHO05D008547 3.2e-75 286.2 283 60.8
SalBow2G1916 Salvia bowleyana HOM05D006025 ORTHO05D008547 4.2e-75 285.8 236 64.4
SEGI_16485 Sequoiadendron giganteum HOM05D006025 ORTHO05D008547 2.8e-71 273.1 221 63.8
Zm00001eb212770 Zea mays HOM05D006025 ORTHO05D008547 4.6e-66 255.8 197 67.0
Mapoly0001s0092 Marchantia polymorpha HOM05D006025 ORTHO05D008547 2.8e-63 246.5 217 58.5
SMO147G0037 Selaginella moellendorffii HOM05D006025 ORTHO05D008547 3.1e-62 243.0 202 60.4
AagrBONN_evm.TU.Sc2ySwM_117.678 Anthoceros agrestis HOM05D006025 ORTHO05D008547 2.9e-60 236.5 200 60.0
CBR_g39595 Chara braunii HOM05D006025 ORTHO05D008547 3.2e-59 233.0 198 59.1
Pp3c22_2360 Physcomitrium patens HOM05D006025 ORTHO05D008547 1.7e-55 220.7 205 55.1
CDE07G0470 Ceratophyllum demersum HOM05D006025 ORTHO05D008547 1.0e-52 211.5 211 54.5
HPP92_018837 Vanilla planifolia HOM05D006025 ORTHO05D008547 1.3e-52 211.1 150 71.3
CDE06G2488 Ceratophyllum demersum HOM05D006025 ORTHO05D008547 3.0e-33 146.7 173 48.0
SEGI_34054 Sequoiadendron giganteum HOM05D006025 ORTHO05D008547 5.2e-33 146.0 110 67.3
Glyma.02G024100 Glycine max HOM05D006025 ORTHO05D008547 8.8e-33 145.2 204 50.5
Solyc05g006965.1 Solanum lycopersicum HOM05D006025 ORTHO05D008547 8.3e-31 138.7 180 49.4
Hma1.2p1_0513F.1_g169540 Hydrangea macrophylla HOM05D006025 ORTHO05D008547 1.6e-18 97.8 91 63.7
Hma1.2p1_0808F.1_g221580 Hydrangea macrophylla HOM05D006025 ORTHO05D008547 1.4e-17 94.7 91 60.4
DCAR_001229 Daucus carota HOM05D006025 ORTHO05D008547 7.3e-11 72.4 50 72.0
Zm00001eb151370 Zea mays HOM05D006025 ORTHO05D443914 3.4e-08 63.5 55 65.5
Dinv16285 Davidia involucrata HOM05D000027 ORTHO05D000500 3.7e-07 60.1 108 44.4


User provided reference genes

Program Settings