Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund25222 Selenicereus undatus HOM05D001860 ORTHO05D004922 3.6e-191 671.4 333 100.0
EL10Ac6g13236 Beta vulgaris HOM05D001860 ORTHO05D004922 4.7e-106 388.7 315 64.4
FAN12G1253 Fragaria x ananassa HOM05D001860 ORTHO05D004922 2.8e-95 352.8 262 64.9
Manes.05G104100 Manihot esculenta HOM05D001860 ORTHO05D004922 3.7e-95 352.4 262 66.8
QL03p068521 Quercus lobata HOM05D001860 ORTHO05D004922 4.8e-95 352.1 262 66.8
Hma1.2p1_1079F.1_g254970 Hydrangea macrophylla HOM05D001860 ORTHO05D004922 6.3e-95 351.7 259 66.4
Cfa008963 Carpinus fangiana HOM05D001860 ORTHO05D004922 1.1e-94 350.9 310 58.7
FAN22G1600 Fragaria x ananassa HOM05D001860 ORTHO05D004922 1.4e-94 350.5 265 64.2
FAN07G2810 Fragaria x ananassa HOM05D001860 ORTHO05D004922 2.4e-94 349.7 263 65.0
Atru.chr11.1760 Acer truncatum HOM05D001860 ORTHO05D004922 7.0e-94 348.2 261 66.7
Haze_11992 Corylus avellana HOM05D001860 ORTHO05D004922 9.1e-94 347.8 313 59.1
CiPaw.06G086900 Carya illinoinensis HOM05D001860 ORTHO05D004922 2.0e-93 346.7 260 65.4
TWI31G0055 Tripterygium wilfordii HOM05D001860 ORTHO05D004922 1.0e-92 344.4 266 63.9
RcHm_v2.0_Chr4g0439511 Rosa chinensis HOM05D001860 ORTHO05D004922 1.7e-92 343.6 263 63.5
GSVIVG01019959001 Vitis vinifera HOM05D001860 ORTHO05D004922 1.7e-92 343.6 266 63.9
Sed0020595 Sechium edule HOM05D001860 ORTHO05D004922 2.5e-91 339.7 263 63.9
Thecc.02G343500 Theobroma cacao HOM05D001860 ORTHO05D004922 2.5e-91 339.7 266 62.0
MELO3C012111.2 Cucumis melo HOM05D001860 ORTHO05D004922 4.2e-91 339.0 260 62.7
CANSAT64G2732 Cannabis sativa HOM05D001860 ORTHO05D004922 7.2e-91 338.2 260 64.6
CsaV3_5G032890 Cucumis sativus L. HOM05D001860 ORTHO05D004922 7.2e-91 338.2 305 57.4
QL03p068489 Quercus lobata HOM05D001860 ORTHO05D004922 1.6e-90 337.0 252 65.1
FvH4_4g31120 Fragaria vesca HOM05D001860 ORTHO05D004922 2.7e-90 336.3 263 63.5
QL03p068503 Quercus lobata HOM05D001860 ORTHO05D004922 6.1e-90 335.1 260 65.4
TAR629G3174 Trochodendron aralioides HOM05D001860 ORTHO05D004922 1.0e-89 334.3 260 64.6
AUR62032811 Chenopodium quinoa HOM05D001860 ORTHO05D004922 1.4e-89 334.0 223 73.1
CsaV3_5G032900 Cucumis sativus L. HOM05D001860 ORTHO05D004922 1.4e-89 334.0 272 59.6
CSS0022995 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 1.8e-89 333.6 261 63.2
Duzib248G0566 Durio zibethinus HOM05D001860 ORTHO05D004922 1.8e-89 333.6 271 60.5
Phvul.002G083300 Phaseolus vulgaris HOM05D001860 ORTHO05D004922 1.8e-89 333.6 263 63.1
Ciclev10032245m.g Citrus clementina HOM05D001860 ORTHO05D004922 3.0e-89 332.8 260 63.5
MD16G1070300 Malus domestica HOM05D001860 ORTHO05D004922 5.2e-89 332.0 283 58.7
PSO478G0757 Papaver somniferum HOM05D001860 ORTHO05D004922 8.8e-89 331.3 267 61.8
Actinidia31905 Actinidia chinensis HOM05D001860 ORTHO05D004922 1.5e-88 330.5 256 65.2
ClCG05G024130 Citrullus lanatus HOM05D001860 ORTHO05D004922 2.0e-88 330.1 268 61.2
Psat2g116760 Pisum sativum HOM05D001860 ORTHO05D004922 5.7e-88 328.6 261 60.5
Glyma.02G109300 Glycine max HOM05D001860 ORTHO05D004922 9.7e-88 327.8 262 61.8
Solyc06g084030.3 Solanum lycopersicum HOM05D001860 ORTHO05D004922 9.7e-88 327.8 306 54.6
Sopen06g035410 Solanum pennellii HOM05D001860 ORTHO05D004922 9.7e-88 327.8 306 54.6
Potri.008G088500 Populus trichocarpa HOM05D001860 ORTHO05D004922 1.3e-87 327.4 332 52.7
Lj2g0002858 Lotus japonicus HOM05D001860 ORTHO05D004922 1.7e-87 327.0 279 60.6
Aqoxy5G04114 Aquilegia oxysepala HOM05D001860 ORTHO05D004922 2.8e-87 326.2 267 60.3
arahy.Tifrunner.gnm1.ann1.0UW6S5 Arachis hypogaea HOM05D001860 ORTHO05D004922 2.8e-87 326.2 261 61.7
PSO017G0798 Papaver somniferum HOM05D001860 ORTHO05D004922 2.8e-87 326.2 266 60.9
SGA_v2.0_scaffold172G38956 Striga asiatica HOM05D001860 ORTHO05D004922 1.4e-86 323.9 270 58.1
MSTRG.7790 Avicennia marina HOM05D001860 ORTHO05D004922 2.4e-86 323.2 328 54.0
Ca_04822_v3 Cicer arietinum L. HOM05D001860 ORTHO05D004922 2.4e-86 323.2 260 60.0
Oeu028270.1 Olea europaea HOM05D001860 ORTHO05D004922 5.3e-86 322.0 263 61.2
Rhsim12G0064600 Rhododendron simsii HOM05D001860 ORTHO05D004922 9.1e-86 321.2 264 62.5
SalBow2G3316 Salvia bowleyana HOM05D001860 ORTHO05D004922 9.1e-86 321.2 258 61.2
Gorai.013G087000 Gossypium raimondii HOM05D001860 ORTHO05D004922 1.6e-85 320.5 277 57.8
Eucgr.B03211 Eucalyptus grandis HOM05D001860 ORTHO05D004922 2.7e-85 319.7 266 59.4
Nitab4.5_0006433g0040 Nicotiana tabacum HOM05D001860 ORTHO05D004922 2.7e-85 319.7 222 70.3
Lj3A1035T53 Lonicera japonica HOM05D001860 ORTHO05D004922 3.5e-85 319.3 222 69.4
CAN.G771.16 Capsicum annuum HOM05D001860 ORTHO05D004922 4.5e-85 318.9 258 60.9
Medtr5g041780 Medicago truncatula HOM05D001860 ORTHO05D004922 1.0e-84 317.8 258 59.3
MBI05_g10765_MAGBIO Magnolia biondii HOM05D001860 ORTHO05D004922 8.5e-84 314.7 261 61.3
Lsat_1_v5_gn_3_52040 Lactuca sativa HOM05D001860 ORTHO05D004922 1.5e-83 313.9 262 60.7
Nitab4.5_0001044g0130 Nicotiana tabacum HOM05D001860 ORTHO05D004922 1.5e-83 313.9 222 67.6
PGSC0003DMG400020063 Solanum tuberosum HOM05D001860 ORTHO05D004922 1.5e-83 313.9 222 67.1
arahy.Tifrunner.gnm1.ann1.WF3EDY Arachis hypogaea HOM05D001860 ORTHO05D004922 2.5e-83 313.2 289 55.0
Peaxi162Scf01530g00038 Petunia axillaris HOM05D001860 ORTHO05D004922 4.2e-83 312.4 222 67.1
arahy.Tifrunner.gnm1.ann1.F2WL4X Arachis hypogaea HOM05D001860 ORTHO05D004922 5.5e-83 312.0 289 55.0
MELO3C012110.2 Cucumis melo HOM05D001860 ORTHO05D004922 5.5e-83 312.0 300 54.3
Os02g0744100 Oryza sativa ssp. japonica HOM05D001860 ORTHO05D004922 7.2e-83 311.6 261 58.2
Cc11_g12800 Coffea canephora HOM05D001860 ORTHO05D004922 9.4e-83 311.2 303 54.1
DCAR_026253 Daucus carota HOM05D001016 ORTHO05D003396 9.4e-83 311.2 274 58.8
Nn3g17288 Nelumbo nucifera HOM05D001860 ORTHO05D004922 2.7e-82 309.7 263 57.4
ECA246G1483 Erigeron canadensis HOM05D001860 ORTHO05D004922 8.0e-82 308.1 259 60.2
COL.COLO4_22943 Corchorus olitorius HOM05D001860 ORTHO05D004922 2.3e-81 306.6 279 55.9
Migut.L01273 Erythranthe guttata HOM05D001860 ORTHO05D004922 6.8e-81 305.1 222 68.0
HanXRQChr17g0545281 Helianthus annuus HOM05D001860 ORTHO05D004922 2.0e-80 303.5 269 58.4
vmacro01268 Vaccinium macrocarpon HOM05D001860 ORTHO05D004922 2.0e-80 303.5 357 49.6
Lalb_Chr04g0255941 Lupinus albus HOM05D001860 ORTHO05D004922 1.7e-79 300.4 332 49.4
ATR0564G196 Amborella trichopoda HOM05D001860 ORTHO05D004922 8.3e-79 298.1 262 56.1
TPR.G36138 Trifolium pratense HOM05D001860 ORTHO05D004922 1.4e-78 297.4 217 65.9
AT1G69523 Arabidopsis thaliana HOM05D001860 ORTHO05D004922 3.1e-78 296.2 258 57.0
HPP92_016837 Vanilla planifolia HOM05D001860 ORTHO05D004922 3.1e-78 296.2 269 53.9
Sp5g24630 Schrenkiella parvula HOM05D001860 ORTHO05D004922 1.6e-77 293.9 259 55.2
SEGI_35280 Sequoiadendron giganteum HOM05D001860 ORTHO05D004922 2.7e-77 293.1 273 53.8
Zm00001eb194590 Zea mays HOM05D001860 ORTHO05D004922 1.0e-76 291.2 260 53.8
Carub.0002s1616 Capsella rubella HOM05D001860 ORTHO05D004922 1.3e-76 290.8 258 55.0
Aa31LG4G11250 Aethionema arabicum HOM05D001860 ORTHO05D004922 1.7e-76 290.4 262 55.0
Sabra08G0066100 Salix brachista HOM05D001860 ORTHO05D004922 2.3e-76 290.0 378 45.0
A07p35850 Brassica napus HOM05D001860 ORTHO05D004922 2.9e-76 289.7 259 55.2
C06p40330 Brassica napus HOM05D001860 ORTHO05D004922 5.0e-76 288.9 259 55.2
BcaC08g46392 Brassica carinata HOM05D001860 ORTHO05D004922 8.6e-76 288.1 257 55.3
THA.LOC104822045 Tarenaya hassleriana HOM05D001860 ORTHO05D004922 8.6e-76 288.1 314 51.3
CDE04G1474 Ceratophyllum demersum HOM05D001860 ORTHO05D004922 1.1e-75 287.7 267 52.4
CDE06G2440 Ceratophyllum demersum HOM05D001860 ORTHO05D004922 1.1e-75 287.7 222 61.3
BcaB03g14720 Brassica carinata HOM05D001860 ORTHO05D004922 1.9e-75 287.0 259 56.8
THA.LOC104822044 Tarenaya hassleriana HOM05D001860 ORTHO05D004922 2.5e-75 286.6 289 51.6
BolC6t39399H Brassica oleracea HOM05D001860 ORTHO05D004922 4.2e-75 285.8 257 55.3
BcaB03g14715 Brassica carinata HOM05D001860 ORTHO05D004922 9.5e-75 284.6 269 53.2
FAN17G3114 Fragaria x ananassa HOM05D001860 ORTHO05D004922 2.8e-74 283.1 263 56.7
BolC6t39396H Brassica oleracea HOM05D001860 ORTHO05D004922 6.1e-74 282.0 281 52.0
unitig_26.g10298 Utricularia gibba HOM05D001860 ORTHO05D004922 6.1e-74 282.0 313 50.5
BraA07t31170Z Brassica rapa HOM05D001860 ORTHO05D004922 1.0e-73 281.2 262 54.6
BraA07t31171Z Brassica rapa HOM05D001860 ORTHO05D004922 3.0e-73 279.6 254 54.7
BolC6t39398H Brassica oleracea HOM05D001860 ORTHO05D004922 6.8e-73 278.5 270 53.0
A07p35830 Brassica napus HOM05D001860 ORTHO05D004922 1.2e-72 277.7 285 51.6
C06p40340 Brassica napus HOM05D001860 ORTHO05D004922 1.2e-72 277.7 281 51.6
BraA07t30786Z Brassica rapa HOM05D001860 ORTHO05D004922 1.2e-72 277.7 265 55.1
BraA07t31169Z Brassica rapa HOM05D001860 ORTHO05D004922 1.2e-72 277.7 285 51.6
THA.LOC104822184 Tarenaya hassleriana HOM05D001860 ORTHO05D004922 1.5e-72 277.3 224 61.6
vmacro01267 Vaccinium macrocarpon HOM05D001860 ORTHO05D004922 1.5e-72 277.3 382 44.5
A07p35840 Brassica napus HOM05D001860 ORTHO05D004922 3.4e-72 276.2 262 53.8
Thhalv10018913m.g Eutrema salsugineum HOM05D001860 ORTHO05D004922 3.4e-72 276.2 268 52.2
CARHR062460 Cardamine hirsuta HOM05D001860 ORTHO05D004922 8.3e-71 271.6 259 54.4
Carub.0002s1617 Capsella rubella HOM05D001860 ORTHO05D004922 1.1e-70 271.2 270 51.9
Sp5g24640 Schrenkiella parvula HOM05D001860 ORTHO05D004922 1.1e-70 271.2 273 51.3
AL2G28650 Arabidopsis lyrata HOM05D001860 ORTHO05D004922 1.4e-70 270.8 259 52.9
BcaB03g15478 Brassica carinata HOM05D001860 ORTHO05D004922 1.4e-70 270.8 264 52.7
BcaC08g46390 Brassica carinata HOM05D001860 ORTHO05D004922 2.4e-70 270.0 257 52.9
AT1G69526 Arabidopsis thaliana HOM05D001860 ORTHO05D004922 1.2e-69 267.7 266 51.5
Carub.0002s1615 Capsella rubella HOM05D001860 ORTHO05D004922 1.2e-69 267.7 259 52.1
Prupe.1G276900 Prunus persica HOM05D001860 ORTHO05D004922 7.8e-69 265.0 201 65.7
Ah.02g129590 Amaranthus hybridus HOM05D001860 ORTHO05D004922 1.0e-68 264.6 298 50.7
Pp3c24_6910 Physcomitrium patens HOM05D001860 ORTHO05D004922 1.9e-67 260.4 216 60.2
SMO239G0167 Selaginella moellendorffii HOM05D001860 ORTHO05D004922 1.9e-67 260.4 261 51.7
AagrBONN_evm.TU.Sc2ySwM_368.914 Anthoceros agrestis HOM05D001860 ORTHO05D004922 9.5e-67 258.1 256 51.2
C06p40360 Brassica napus HOM05D001860 ORTHO05D004922 1.0e-65 254.6 251 52.2
Mapoly0002s0191 Marchantia polymorpha HOM05D001860 ORTHO05D004922 4.4e-64 249.2 263 50.6
CARHR062480 Cardamine hirsuta HOM05D001860 ORTHO05D004922 1.7e-63 247.3 203 59.6
Gohir.A13G076700 Gossypium hirsutum HOM05D001860 ORTHO05D004922 6.4e-63 245.4 213 58.7
Gohir.D13G076400 Gossypium hirsutum HOM05D001860 ORTHO05D004922 8.3e-63 245.0 215 58.1
PGR102G3336 Punica granatum HOM05D001860 ORTHO05D004922 2.4e-62 243.4 179 68.7
Carub.0002s1614 Capsella rubella HOM05D001860 ORTHO05D004922 4.7e-58 229.2 218 54.6
AL2G28640 Arabidopsis lyrata HOM05D001860 ORTHO05D004922 4.0e-57 226.1 214 53.7
A07p35820 Brassica napus HOM05D001482 ORTHO05D001499 1.5e-56 224.2 207 54.6
BcaC08g46388 Brassica carinata HOM05D001860 ORTHO05D004922 1.3e-55 221.1 234 50.0
BraA07t31168Z Brassica rapa HOM05D001482 ORTHO05D001499 1.3e-55 221.1 207 53.6
BcaB03g14714 Brassica carinata HOM05D001860 ORTHO05D004922 2.2e-55 220.3 207 54.1
BolC6t39394H Brassica oleracea HOM05D001482 ORTHO05D001499 2.9e-55 219.9 207 54.1
Thhalv10019583m.g Eutrema salsugineum HOM05D001860 ORTHO05D004922 3.7e-55 219.5 207 54.1
CARHR062450 Cardamine hirsuta HOM05D001860 ORTHO05D004922 8.3e-55 218.4 216 53.2
Sp5g24610 Schrenkiella parvula HOM05D001860 ORTHO05D004922 1.4e-54 217.6 214 52.3
AT1G69520 Arabidopsis thaliana HOM05D001860 ORTHO05D004922 4.1e-54 216.1 207 54.6
Sc11g0002060 Simmondsia chinensis HOM05D001860 ORTHO05D004922 1.3e-52 211.1 172 64.5
AUR62005816 Chenopodium quinoa HOM05D001860 ORTHO05D004922 6.2e-50 202.2 136 74.3
C06p40380 Brassica napus HOM05D001482 ORTHO05D001499 1.5e-48 197.6 228 47.4
CSS0019961 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 2.9e-47 193.4 137 66.4
SMO137G0248 Selaginella moellendorffii HOM05D001860 ORTHO05D004922 6.4e-47 192.2 202 48.0
Aa31LG4G11270 Aethionema arabicum HOM05D001860 ORTHO05D004922 2.3e-44 183.7 235 45.1
Dinv16666 Davidia involucrata HOM05D001860 ORTHO05D004922 3.3e-43 179.9 144 63.9
Sp5g24620 Schrenkiella parvula HOM05D001860 ORTHO05D004922 8.1e-42 175.3 140 60.7
Oeu028272.1 Olea europaea HOM05D001860 ORTHO05D004922 4.4e-40 169.5 124 65.3
BcaC08g45887 Brassica carinata HOM05D001860 ORTHO05D004922 2.7e-37 160.2 132 61.4
BcaB03g14717 Brassica carinata HOM05D001860 ORTHO05D004922 1.0e-36 158.3 170 48.2
Cpa.g.sc350.4 Carica papaya HOM05D001860 ORTHO05D004922 1.9e-35 154.1 134 57.5
A07p31570 Brassica napus HOM05D001860 ORTHO05D004922 2.5e-35 153.7 145 56.6
BolC6t38800H Brassica oleracea HOM05D000005 ORTHO05D042562 7.3e-35 152.1 279 38.0
CBR_g41443 Chara braunii HOM05D001860 ORTHO05D004922 7.3e-35 152.1 211 40.8
C06p36870 Brassica napus HOM05D000005 ORTHO05D042562 1.3e-34 151.4 279 38.0
C06p40370 Brassica napus HOM05D001860 ORTHO05D004922 1.3e-34 151.4 117 63.2
Thhalv10019188m.g Eutrema salsugineum HOM05D001860 ORTHO05D004922 2.4e-33 147.1 145 51.7
MCO09G753 Micromonas commoda HOM05D001860 ORTHO05D004922 5.3e-33 146.0 136 52.2
PRCOL_00003589 Prasinoderma coloniale HOM05D001860 ORTHO05D004922 5.4e-30 136.0 185 42.7
MCO03G556 Micromonas commoda HOM05D001860 ORTHO05D004922 9.3e-30 135.2 227 35.2
PRCOL_00000783 Prasinoderma coloniale HOM05D001860 ORTHO05D004922 2.3e-28 130.6 187 41.2
Cre07.g342550 Chlamydomonas reinhardtii HOM05D001860 ORTHO05D004922 1.6e-26 124.4 251 33.5
CSS0034144 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 2.4e-22 110.5 83 63.9
CSS0016207 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 4.2e-22 109.8 76 65.8
VMungo1383G2064 Vigna mungo HOM05D001860 ORTHO05D004922 1.8e-20 104.4 88 55.7
Thecc.01G276100 Theobroma cacao HOM05D001860 ORTHO05D004922 7.4e-19 99.0 82 56.1
arahy.Tifrunner.gnm1.ann1.661SM0 Arachis hypogaea HOM05D001860 ORTHO05D004922 2.8e-18 97.1 85 60.0
Actinidia19883 Actinidia chinensis HOM05D001860 ORTHO05D004922 2.6e-16 90.5 90 54.4
CBR_g34579 Chara braunii HOM05D001860 ORTHO05D019626 1.2e-13 81.6 173 36.4
MCO03G203 Micromonas commoda HOM05D023757 ORTHO05D024904 5.7e-11 72.8 152 33.6
CDE08G0834 Ceratophyllum demersum HOM05D001860 ORTHO05D004922 4.8e-10 69.7 59 52.5
Cfa024139 Carpinus fangiana HOM05D001860 ORTHO05D004922 5.3e-09 66.2 159 30.8
Zm00001eb254460 Zea mays HOM05D001860 ORTHO05D004922 4.5e-08 63.2 76 47.4
PRCOL_00001331 Prasinoderma coloniale HOM05D001860 ORTHO05D004922 8.4e-07 58.9 144 29.2
MCO11G703 Micromonas commoda HOM05D001535 ORTHO05D004010 2.5e-06 57.4 235 23.8
Mapoly0068s0103 Marchantia polymorpha HOM05D019459 ORTHO05D019626 4.2e-06 56.6 176 29.0
MCO11G161 Micromonas commoda HOM05D019459 ORTHO05D019626 9.3e-06 55.5 116 35.3


User provided reference genes

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