Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund25206 Selenicereus undatus HOM05D006636 ORTHO05D008266 2.9e-38 161.4 80 100.0
Hund05854 Selenicereus undatus HOM05D006636 ORTHO05D008266 4.3e-34 147.5 77 92.2
Sc22g0003980 Simmondsia chinensis HOM05D006636 ORTHO05D008266 6.3e-33 143.7 77 89.6
AUR62032843 Chenopodium quinoa HOM05D006636 ORTHO05D008266 1.4e-32 142.5 77 87.0
Ah.02g129360 Amaranthus hybridus HOM05D006636 ORTHO05D008266 3.1e-32 141.4 76 88.2
AUR62005850 Chenopodium quinoa HOM05D006636 ORTHO05D008266 5.3e-32 140.6 77 85.7
Ah.03g134670 Amaranthus hybridus HOM05D006636 ORTHO05D008266 9.0e-32 139.8 75 88.0
EL10Ac6g13264 Beta vulgaris HOM05D006636 ORTHO05D008266 1.3e-30 136.0 77 83.1
Manes.03G170500 Manihot esculenta HOM05D006636 ORTHO05D008266 1.4e-29 132.5 76 77.6
Gohir.D10G147800 Gossypium hirsutum HOM05D006636 ORTHO05D008266 2.5e-29 131.7 75 81.3
Gorai.011G165000 Gossypium raimondii HOM05D006636 ORTHO05D008266 2.5e-29 131.7 75 81.3
Gohir.A02G035000 Gossypium hirsutum HOM05D006636 ORTHO05D008266 4.2e-29 131.0 75 81.3
Gohir.D02G041800 Gossypium hirsutum HOM05D006636 ORTHO05D008266 4.2e-29 131.0 75 81.3
Gorai.005G046200 Gossypium raimondii HOM05D006636 ORTHO05D008266 4.2e-29 131.0 75 81.3
Eucgr.H03183 Eucalyptus grandis HOM05D006636 ORTHO05D008266 7.2e-29 130.2 76 77.6
Thecc.04G243200 Theobroma cacao HOM05D006636 ORTHO05D008266 2.7e-28 128.3 74 81.1
Cfa008404 Carpinus fangiana HOM05D006636 ORTHO05D008266 4.6e-28 127.5 75 77.3
COL.COLO4_15761 Corchorus olitorius HOM05D006636 ORTHO05D008266 7.9e-28 126.7 75 81.3
Lsat_1_v5_gn_3_124880 Lactuca sativa HOM05D006636 ORTHO05D008266 7.9e-28 126.7 76 76.3
RcHm_v2.0_Chr4g0388961 Rosa chinensis HOM05D006636 ORTHO05D008266 7.9e-28 126.7 76 76.3
Atru.chr4.2290 Acer truncatum HOM05D006636 ORTHO05D008266 1.0e-27 126.3 74 78.4
Manes.15G035100 Manihot esculenta HOM05D006636 ORTHO05D008266 1.0e-27 126.3 75 76.0
CiPaw.02G118100 Carya illinoinensis HOM05D006636 ORTHO05D008266 1.8e-27 125.6 75 76.0
Gohir.A10G118900 Gossypium hirsutum HOM05D006636 ORTHO05D008266 1.8e-27 125.6 75 77.3
CiPaw.01G192900 Carya illinoinensis HOM05D006636 ORTHO05D008266 2.3e-27 125.2 76 76.3
Nn3g19491 Nelumbo nucifera HOM05D006636 ORTHO05D008266 2.3e-27 125.2 74 79.7
QL06p014938 Quercus lobata HOM05D006636 ORTHO05D008266 2.3e-27 125.2 74 79.7
ClCG06G006590 Citrullus lanatus HOM05D006636 ORTHO05D008266 3.0e-27 124.8 74 81.1
Ciclev10006361m.g Citrus clementina HOM05D006636 ORTHO05D008266 3.0e-27 124.8 74 75.7
arahy.Tifrunner.gnm1.ann1.G1PS4Z Arachis hypogaea HOM05D006636 ORTHO05D008266 5.1e-27 124.0 75 74.7
ECA240G3921 Erigeron canadensis HOM05D006636 ORTHO05D008266 5.1e-27 124.0 77 75.3
FAN22G1829 Fragaria x ananassa HOM05D006636 ORTHO05D008266 5.1e-27 124.0 76 73.7
Lsat_1_v5_gn_6_37261 Lactuca sativa HOM05D006636 ORTHO05D008266 5.1e-27 124.0 76 76.3
CSS0008233 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 6.7e-27 123.6 73 78.1
CSS0036965 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 6.7e-27 123.6 73 78.1
Cc03_g04590 Coffea canephora HOM05D006636 ORTHO05D008266 8.8e-27 123.2 76 75.0
Dinv44607 Davidia involucrata HOM05D006636 ORTHO05D008266 8.8e-27 123.2 74 77.0
Duzib212G0484 Durio zibethinus HOM05D006636 ORTHO05D008266 8.8e-27 123.2 75 77.3
CSS0035223 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 1.1e-26 122.9 74 77.0
FAN12G3161 Fragaria x ananassa HOM05D006636 ORTHO05D008266 1.1e-26 122.9 76 72.4
MD16G1204700 Malus domestica HOM05D006636 ORTHO05D008266 1.1e-26 122.9 73 76.7
Prupe.1G025800 Prunus persica HOM05D006636 ORTHO05D008266 1.1e-26 122.9 76 73.7
Sed0018024 Sechium edule HOM05D006636 ORTHO05D008266 1.5e-26 122.5 74 78.4
MD13G1203300 Malus domestica HOM05D006636 ORTHO05D008266 2.5e-26 121.7 73 76.7
vmacro15399 Vaccinium macrocarpon HOM05D006636 ORTHO05D008266 3.3e-26 121.3 74 74.3
Glyma.02G001300 Glycine max HOM05D006636 ORTHO05D008266 5.7e-26 120.6 75 73.3
Lalb_Chr03g0037601 Lupinus albus HOM05D006636 ORTHO05D008266 7.4e-26 120.2 75 72.0
CARHR220860 Cardamine hirsuta HOM05D006636 ORTHO05D008266 9.7e-26 119.8 74 74.3
Duzib151G1121 Durio zibethinus HOM05D006636 ORTHO05D008266 9.7e-26 119.8 74 74.3
Migut.N00229 Erythranthe guttata HOM05D006636 ORTHO05D008266 9.7e-26 119.8 74 74.3
Phvul.006G006400 Phaseolus vulgaris HOM05D006636 ORTHO05D008266 9.7e-26 119.8 75 72.0
Aa31LG9G2720 Aethionema arabicum HOM05D006636 ORTHO05D008266 1.3e-25 119.4 74 73.0
MSTRG.24709 Avicennia marina HOM05D006636 ORTHO05D008266 1.3e-25 119.4 75 76.0
PGR142G1808 Punica granatum HOM05D006636 ORTHO05D008266 1.7e-25 119.0 75 70.7
SalBow2G2841 Salvia bowleyana HOM05D006636 ORTHO05D008266 1.7e-25 119.0 76 71.1
Thhalv10026714m.g Eutrema salsugineum HOM05D006636 ORTHO05D008266 2.8e-25 118.2 74 74.3
Phvul.010G060600 Phaseolus vulgaris HOM05D006636 ORTHO05D008266 2.8e-25 118.2 74 71.6
Sp7g12710 Schrenkiella parvula HOM05D006636 ORTHO05D008266 2.8e-25 118.2 74 74.3
PSO210G2897 Papaver somniferum HOM05D006636 ORTHO05D008266 3.7e-25 117.9 74 70.3
Aqoxy5G00371 Aquilegia oxysepala HOM05D006636 ORTHO05D008266 4.8e-25 117.5 74 73.0
AT4G14615 Arabidopsis thaliana HOM05D006636 ORTHO05D008266 4.8e-25 117.5 74 73.0
CANSAT80G2460 Cannabis sativa HOM05D006636 ORTHO05D008266 4.8e-25 117.5 74 71.6
BcaB04g18245 Brassica carinata HOM05D006636 ORTHO05D008266 6.3e-25 117.1 74 73.0
A08p11260 Brassica napus HOM05D006636 ORTHO05D008266 6.3e-25 117.1 74 73.0
BraA08t33120Z Brassica rapa HOM05D006636 ORTHO05D008266 6.3e-25 117.1 74 73.0
TWI53G1752 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 6.3e-25 117.1 74 70.3
TWI53G1902 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 6.3e-25 117.1 74 70.3
Carub.0007s2759 Capsella rubella HOM05D006636 ORTHO05D008266 8.2e-25 116.7 74 73.0
CARHR043050 Cardamine hirsuta HOM05D006636 ORTHO05D008266 1.1e-24 116.3 77 68.8
THA.LOC104808586 Tarenaya hassleriana HOM05D006636 ORTHO05D008266 1.1e-24 116.3 74 73.0
BcaC07g37832 Brassica carinata HOM05D006636 ORTHO05D008266 1.4e-24 115.9 74 73.0
BolC8t48218H Brassica oleracea HOM05D006636 ORTHO05D008266 1.4e-24 115.9 74 73.0
Oeu029765.1 Olea europaea HOM05D006636 ORTHO05D008266 1.4e-24 115.9 76 69.7
PSO832G4373 Papaver somniferum HOM05D006636 ORTHO05D008266 1.4e-24 115.9 74 71.6
Thhalv10011910m.g Eutrema salsugineum HOM05D006636 ORTHO05D008266 1.8e-24 115.5 74 70.3
AL7G41500 Arabidopsis lyrata HOM05D006636 ORTHO05D008266 3.1e-24 114.8 74 71.6
GSVIVG01018087001 Vitis vinifera HOM05D006636 ORTHO05D008266 3.1e-24 114.8 76 69.7
AL1G61120 Arabidopsis lyrata HOM05D006636 ORTHO05D008266 4.1e-24 114.4 77 67.5
Dinv14071 Davidia involucrata HOM05D006636 ORTHO05D008266 9.1e-24 113.2 79 70.9
TWI73G0386 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 5.9e-23 110.5 74 68.9
TAR365G0562 Trochodendron aralioides HOM05D006636 ORTHO05D008266 7.7e-23 110.2 65 76.9
Oeu032618.1 Olea europaea HOM05D006636 ORTHO05D008266 1.0e-22 109.8 76 67.1
ATR0665G452 Amborella trichopoda HOM05D006636 ORTHO05D008266 1.3e-22 109.4 67 74.6
AT1G52825 Arabidopsis thaliana HOM05D006636 ORTHO05D008266 1.3e-22 109.4 73 67.1
Peaxi162Scf00788g00311 Petunia axillaris HOM05D006636 ORTHO05D008266 2.2e-22 108.6 74 67.6
Lj3g0021432 Lotus japonicus HOM05D006636 ORTHO05D008266 5.0e-22 107.5 76 68.4
Nitab4.5_0001787g0030 Nicotiana tabacum HOM05D006636 ORTHO05D008266 5.0e-22 107.5 73 68.5
Nitab4.5_0001856g0080 Nicotiana tabacum HOM05D006636 ORTHO05D008266 5.0e-22 107.5 73 68.5
Potri.010G079100 Populus trichocarpa HOM05D006636 ORTHO05D008266 8.5e-22 106.7 75 62.7
HPP92_009619 Vanilla planifolia HOM05D006636 ORTHO05D008266 8.5e-22 106.7 72 70.8
CDE07G1452 Ceratophyllum demersum HOM05D006636 ORTHO05D008266 5.5e-21 104.0 74 64.9
Potri.008G160101 Populus trichocarpa HOM05D006636 ORTHO05D008266 5.5e-21 104.0 74 62.2
TPR.G32796 Trifolium pratense HOM05D006636 ORTHO05D008266 5.5e-21 104.0 76 63.2
Ca_12203_v3 Cicer arietinum L. HOM05D006636 ORTHO05D008266 7.2e-21 103.6 76 63.2
Psat6g136920 Pisum sativum HOM05D006636 ORTHO05D008266 7.2e-21 103.6 76 63.2
Zm00001eb116910 Zea mays HOM05D006636 ORTHO05D008266 7.2e-21 103.6 73 65.8
Os07g0181800 Oryza sativa ssp. japonica HOM05D006636 ORTHO05D008266 9.4e-21 103.2 76 61.8
Solyc09g083070.3 Solanum lycopersicum HOM05D006636 ORTHO05D008266 9.4e-21 103.2 73 67.1
Carub.0001s4194 Capsella rubella HOM05D006636 ORTHO05D008266 1.2e-20 102.8 67 70.1
Medtr1g040905 Medicago truncatula HOM05D006636 ORTHO05D008266 1.6e-20 102.4 76 63.2
Haze_11264 Corylus avellana HOM05D006636 ORTHO05D008266 2.1e-20 102.1 105 51.4
Sopen09g031950 Solanum pennellii HOM05D006636 ORTHO05D008266 2.7e-20 101.7 73 65.8
CAN.G749.28 Capsicum annuum HOM05D006636 ORTHO05D008266 6.1e-20 100.5 73 64.4
Psat4g201760 Pisum sativum HOM05D000716 ORTHO05D009512 6.1e-20 100.5 76 61.8
Psat4g152400 Pisum sativum HOM05D006636 ORTHO05D008266 6.7e-19 97.1 76 60.5
Pp3c4_21990 Physcomitrium patens HOM05D006636 ORTHO05D008266 7.4e-18 93.6 68 63.2
HanXRQChr13g0424641 Helianthus annuus HOM05D006636 ORTHO05D008266 3.1e-16 88.2 51 80.4
Mapoly0075s0084 Marchantia polymorpha HOM05D006636 ORTHO05D008266 9.1e-16 86.7 68 58.8
Psat4g152480 Pisum sativum HOM05D000716 ORTHO05D009512 9.1e-16 86.7 66 60.6
Sabra10G0063800 Salix brachista HOM05D006636 ORTHO05D008266 5.9e-15 84.0 117 39.3
AagrBONN_evm.TU.Sc2ySwM_117.3049 Anthoceros agrestis HOM05D006636 ORTHO05D008266 6.1e-12 73.9 61 57.4
MCO07G270 Micromonas commoda HOM05D006636 ORTHO05D008266 1.1e-10 69.7 63 50.8
unitig_26.g9474 Utricularia gibba HOM05D006636 ORTHO05D008266 2.6e-10 68.6 61 57.4
SalBow4G0852 Salvia bowleyana HOM05D006636 ORTHO05D008266 2.2e-09 65.5 42 69.0
Actinidia40100 Actinidia chinensis HOM05D006636 ORTHO05D008266 3.7e-09 64.7 42 66.7
Psat0s152g0080 Pisum sativum HOM05D006636 ORTHO05D008266 4.8e-09 64.3 57 50.9
PGSC0003DMG400006103 Solanum tuberosum HOM05D006636 ORTHO05D008266 1.8e-08 62.4 42 64.3
Rhsim02G0032300 Rhododendron simsii HOM05D006636 ORTHO05D008266 5.3e-08 60.8 30 90.0
MBI04_g19760_MAGBIO Magnolia biondii HOM05D006636 ORTHO05D008266 1.2e-07 59.7 38 71.1
SHI00567 Sapria himalayana HOM05D006636 ORTHO05D008266 3.5e-07 58.2 41 63.4
GSVIVG01002945001 Vitis vinifera HOM05D006636 ORTHO05D008266 7.7e-07 57.0 41 61.0
CsaV3_2G013260 Cucumis sativus L. HOM05D006636 ORTHO05D008266 6.5e-06 53.9 27 88.9


User provided reference genes

Program Settings