Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund25180 Selenicereus undatus HOM05D001391 ORTHO05D005432 1.2e-46 189.5 99 100.0
Hund05837 Selenicereus undatus HOM05D001391 ORTHO05D005432 1.7e-35 152.5 99 77.8
AUR62003104 Chenopodium quinoa HOM05D001391 ORTHO05D005432 1.1e-34 149.8 98 75.5
AUR62007921 Chenopodium quinoa HOM05D001391 ORTHO05D005432 1.1e-34 149.8 98 75.5
MELO3C011425.2 Cucumis melo HOM05D001391 ORTHO05D005432 3.1e-34 148.3 102 74.5
GSVIVG01012214001 Vitis vinifera HOM05D001391 ORTHO05D005432 9.2e-34 146.7 98 73.5
Sed0027135 Sechium edule HOM05D001391 ORTHO05D005432 2.0e-33 145.6 98 75.5
Duzib248G0196 Durio zibethinus HOM05D001391 ORTHO05D005432 2.7e-33 145.2 92 78.3
CiPaw.06G092300 Carya illinoinensis HOM05D001391 ORTHO05D005432 4.5e-33 144.4 97 74.2
Thecc.02G331500 Theobroma cacao HOM05D001391 ORTHO05D005432 4.5e-33 144.4 97 75.3
ATR0064G010 Amborella trichopoda HOM05D001391 ORTHO05D005432 1.0e-32 143.3 88 78.4
Sed0003297 Sechium edule HOM05D001391 ORTHO05D005432 1.0e-32 143.3 98 73.5
Cpa.g.sc1.121 Carica papaya HOM05D001391 ORTHO05D005432 2.3e-32 142.1 97 73.2
CsaV3_6G032550 Cucumis sativus L. HOM05D001391 ORTHO05D005432 2.9e-32 141.7 87 79.3
TWI31G1273 Tripterygium wilfordii HOM05D001391 ORTHO05D005432 2.9e-32 141.7 99 69.7
Ah.02g126880 Amaranthus hybridus HOM05D001391 ORTHO05D005432 3.8e-32 141.4 95 73.7
EL10Ac6g14993 Beta vulgaris HOM05D001391 ORTHO05D005432 3.8e-32 141.4 87 80.5
Lalb_Chr05g0219941 Lupinus albus HOM05D001391 ORTHO05D005432 5.0e-32 141.0 92 75.0
Atru.chr11.1633 Acer truncatum HOM05D001391 ORTHO05D005432 8.6e-32 140.2 97 72.2
Ca_18800_v3 Cicer arietinum L. HOM05D001391 ORTHO05D005432 8.6e-32 140.2 90 75.6
PGR102G1705 Punica granatum HOM05D001391 ORTHO05D005432 8.6e-32 140.2 98 70.4
RcHm_v2.0_Chr4g0438461 Rosa chinensis HOM05D001391 ORTHO05D005432 1.1e-31 139.8 88 76.1
TAR629G1471 Trochodendron aralioides HOM05D001391 ORTHO05D005432 1.1e-31 139.8 97 71.1
TAR629G2660 Trochodendron aralioides HOM05D001391 ORTHO05D005432 1.1e-31 139.8 97 71.1
CSS0007431 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 1.5e-31 139.4 99 70.7
CSS0028231 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 1.5e-31 139.4 99 70.7
FvH4_4g30104 Fragaria vesca HOM05D001391 ORTHO05D005432 2.5e-31 138.7 94 72.3
MBI16_g24179_MAGBIO Magnolia biondii HOM05D001391 ORTHO05D005432 2.5e-31 138.7 98 68.4
RcHm_v2.0_Chr4g0438441 Rosa chinensis HOM05D001391 ORTHO05D005432 2.5e-31 138.7 94 72.3
Manes.01G028100 Manihot esculenta HOM05D001391 ORTHO05D005432 3.3e-31 138.3 91 74.7
SGA_v2.0_scaffold16G07780 Striga asiatica HOM05D001391 ORTHO05D005432 3.3e-31 138.3 97 72.2
THA.LOC104824058 Tarenaya hassleriana HOM05D001391 ORTHO05D005432 3.3e-31 138.3 89 74.2
Ciclev10031905m.g Citrus clementina HOM05D001391 ORTHO05D005432 4.3e-31 137.9 95 71.6
QL03p071709 Quercus lobata HOM05D001391 ORTHO05D005432 4.3e-31 137.9 97 68.0
QL03p072323 Quercus lobata HOM05D001391 ORTHO05D005432 4.3e-31 137.9 97 71.1
THA.LOC104805193 Tarenaya hassleriana HOM05D001391 ORTHO05D005432 4.3e-31 137.9 88 76.1
Aqoxy3G03632 Aquilegia oxysepala HOM05D001391 ORTHO05D005432 7.3e-31 137.1 92 72.8
FAN07G1596 Fragaria x ananassa HOM05D001391 ORTHO05D005432 7.3e-31 137.1 88 76.1
Medtr4g083100 Medicago truncatula HOM05D001391 ORTHO05D005432 7.3e-31 137.1 90 75.6
QL03p071961 Quercus lobata HOM05D001391 ORTHO05D005432 7.3e-31 137.1 97 71.1
QL03p072246 Quercus lobata HOM05D001391 ORTHO05D005432 7.3e-31 137.1 97 71.1
QL06p022506 Quercus lobata HOM05D001391 ORTHO05D005432 7.3e-31 137.1 97 71.1
Psat7g134560 Pisum sativum HOM05D001391 ORTHO05D005432 9.5e-31 136.7 90 74.4
arahy.Tifrunner.gnm1.ann1.52K398 Arachis hypogaea HOM05D001391 ORTHO05D005432 1.2e-30 136.3 95 69.5
Actinidia16169 Actinidia chinensis HOM05D001391 ORTHO05D005432 1.6e-30 136.0 99 69.7
QL03p071791 Quercus lobata HOM05D001391 ORTHO05D005432 1.6e-30 136.0 97 70.1
QL03p071836 Quercus lobata HOM05D001391 ORTHO05D005432 1.6e-30 136.0 97 70.1
QL03p071994 Quercus lobata HOM05D001391 ORTHO05D005432 1.6e-30 136.0 97 70.1
arahy.Tifrunner.gnm1.ann1.G55KBL Arachis hypogaea HOM05D001391 ORTHO05D005432 2.1e-30 135.6 95 69.5
Cc11_g12040 Coffea canephora HOM05D001391 ORTHO05D005432 2.1e-30 135.6 92 71.7
Eucgr.B03154 Eucalyptus grandis HOM05D001391 ORTHO05D005432 2.1e-30 135.6 91 71.4
Glyma.07G225600 Glycine max HOM05D001391 ORTHO05D005432 2.1e-30 135.6 92 71.7
Lj4g0006249 Lotus japonicus HOM05D001391 ORTHO05D005432 2.1e-30 135.6 98 67.3
Potri.010G158700 Populus trichocarpa HOM05D001391 ORTHO05D005432 2.1e-30 135.6 88 73.9
Sabra10G0120500 Salix brachista HOM05D001391 ORTHO05D005432 2.8e-30 135.2 91 71.4
SEGI_06703 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 2.8e-30 135.2 86 74.4
Solyc05g012340.4 Solanum lycopersicum HOM05D001391 ORTHO05D005432 2.8e-30 135.2 88 76.1
Sopen05g007170 Solanum pennellii HOM05D001391 ORTHO05D005432 2.8e-30 135.2 88 76.1
Lj3C1030G23 Lonicera japonica HOM05D001391 ORTHO05D005432 3.6e-30 134.8 99 68.7
Rhsim12G0074900 Rhododendron simsii HOM05D001391 ORTHO05D005432 3.6e-30 134.8 98 69.4
FAN17G2247 Fragaria x ananassa HOM05D001391 ORTHO05D002605 4.7e-30 134.4 88 76.1
SEGI_41081 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 4.7e-30 134.4 87 73.6
MD16G1061600 Malus domestica HOM05D001391 ORTHO05D005432 6.1e-30 134.0 94 69.1
Nn3g17437 Nelumbo nucifera HOM05D001391 ORTHO05D005432 6.1e-30 134.0 87 73.6
QL03p072348 Quercus lobata HOM05D001391 ORTHO05D005432 6.1e-30 134.0 89 73.0
TPR.G34031 Trifolium pratense HOM05D001391 ORTHO05D005432 6.1e-30 134.0 90 73.3
SEGI_37700 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 8.0e-30 133.7 87 73.6
Zm00001eb020150 Zea mays HOM05D001391 ORTHO05D005432 8.0e-30 133.7 87 73.6
Glyma.20G025600 Glycine max HOM05D001391 ORTHO05D005432 1.0e-29 133.3 87 73.6
MD13G1063100 Malus domestica HOM05D001391 ORTHO05D005432 1.4e-29 132.9 94 68.1
Sabra08G0071900 Salix brachista HOM05D001391 ORTHO05D005432 1.4e-29 132.9 88 75.0
vmacro01316 Vaccinium macrocarpon HOM05D001391 ORTHO05D005432 1.4e-29 132.9 98 66.3
Zm00001eb393170 Zea mays HOM05D001391 ORTHO05D005432 1.4e-29 132.9 87 73.6
Nn4g23419 Nelumbo nucifera HOM05D001391 ORTHO05D005432 1.8e-29 132.5 87 73.6
BcaC03g17224 Brassica carinata HOM05D001391 ORTHO05D005432 2.3e-29 132.1 99 63.6
C02p51560 Brassica napus HOM05D001391 ORTHO05D005432 2.3e-29 132.1 99 63.6
BolC2t11243H Brassica oleracea HOM05D001391 ORTHO05D005432 2.3e-29 132.1 99 63.6
CANSAT64G0915 Cannabis sativa HOM05D001391 ORTHO05D005432 2.3e-29 132.1 88 71.6
COL.COLO4_27891 Corchorus olitorius HOM05D001391 ORTHO05D005432 2.3e-29 132.1 97 67.0
ECA246G4329 Erigeron canadensis HOM05D001391 ORTHO05D005432 2.3e-29 132.1 99 67.7
HanXRQChr12g0375271 Helianthus annuus HOM05D001391 ORTHO05D005432 2.3e-29 132.1 88 72.7
Thhalv10004477m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 3.0e-29 131.7 97 63.9
Oeu048144.1 Olea europaea HOM05D001391 ORTHO05D005432 3.0e-29 131.7 89 74.2
Prupe.1G286500 Prunus persica HOM05D001391 ORTHO05D005432 3.0e-29 131.7 94 68.1
unitig_22.g6493 Utricularia gibba HOM05D001391 ORTHO05D005432 3.0e-29 131.7 88 72.7
AL5G13280 Arabidopsis lyrata HOM05D001391 ORTHO05D005432 4.0e-29 131.3 92 67.4
A09p24460 Brassica napus HOM05D001391 ORTHO05D005432 6.8e-29 130.6 92 66.3
PSO478G1327 Papaver somniferum HOM05D001391 ORTHO05D005432 6.8e-29 130.6 97 66.0
Aa31LG2G7090 Aethionema arabicum HOM05D001391 ORTHO05D005432 8.9e-29 130.2 96 66.7
AT2G03510 Arabidopsis thaliana HOM05D001391 ORTHO05D005432 8.9e-29 130.2 92 66.3
BcaB07g30667 Brassica carinata HOM05D001391 ORTHO05D005432 8.9e-29 130.2 92 66.3
BcaC04g21485 Brassica carinata HOM05D001391 ORTHO05D005432 8.9e-29 130.2 92 66.3
C09p31260 Brassica napus HOM05D001391 ORTHO05D005432 8.9e-29 130.2 92 66.3
BolC9t55982H Brassica oleracea HOM05D001391 ORTHO05D005432 8.9e-29 130.2 92 66.3
BraA09t38039Z Brassica rapa HOM05D001391 ORTHO05D005432 8.9e-29 130.2 92 66.3
Dinv34072 Davidia involucrata HOM05D001391 ORTHO05D005432 8.9e-29 130.2 92 68.5
Migut.L01194 Erythranthe guttata HOM05D001391 ORTHO05D005432 8.9e-29 130.2 88 76.1
PSO017G5650 Papaver somniferum HOM05D001391 ORTHO05D005432 1.5e-28 129.4 89 70.8
Sp2g14420 Schrenkiella parvula HOM05D001391 ORTHO05D005432 1.5e-28 129.4 97 62.9
Carub.0005s0265 Capsella rubella HOM05D001391 ORTHO05D005432 2.0e-28 129.0 92 65.2
HanXRQChr15g0477081 Helianthus annuus HOM05D001391 ORTHO05D005432 2.0e-28 129.0 88 72.7
CARHR145860 Cardamine hirsuta HOM05D001391 ORTHO05D005432 2.6e-28 128.6 92 65.2
DCAR_007192 Daucus carota HOM05D001391 ORTHO05D005432 3.4e-28 128.3 99 65.7
CDE05G0079 Ceratophyllum demersum HOM05D001391 ORTHO05D005432 4.4e-28 127.9 86 70.9
Lsat_1_v5_gn_3_53800 Lactuca sativa HOM05D001391 ORTHO05D005432 1.7e-27 125.9 98 64.3
Hma1.2p1_1826F.1_g304410 Hydrangea macrophylla HOM05D001391 ORTHO05D005432 2.2e-27 125.6 96 66.7
SMO364G0146 Selaginella moellendorffii HOM05D001391 ORTHO05D005432 2.2e-27 125.6 87 67.8
CSS0036366 Camellia sinensis var. sinensis HOM05D001391 ORTHO05D005432 3.7e-27 124.8 98 63.3
HanXRQChr08g0223901 Helianthus annuus HOM05D001391 ORTHO05D005432 6.4e-27 124.0 89 68.5
Lj6C779T14 Lonicera japonica HOM05D001391 ORTHO05D005432 6.4e-27 124.0 88 69.3
Pp3c2_37740 Physcomitrium patens HOM05D001391 ORTHO05D005432 6.4e-27 124.0 92 63.0
HPP92_020445 Vanilla planifolia HOM05D001391 ORTHO05D005432 8.3e-27 123.6 87 67.8
Pp3c1_8060 Physcomitrium patens HOM05D001391 ORTHO05D005432 7.0e-26 120.6 92 59.8
SEGI_28419 Sequoiadendron giganteum HOM05D001391 ORTHO05D005432 1.6e-25 119.4 86 68.6
CBR_g22084 Chara braunii HOM05D001391 ORTHO05D005432 2.0e-25 119.0 88 64.8
VMungo0251G0716 Vigna mungo HOM05D001391 ORTHO05D005432 2.0e-25 119.0 121 55.4
Gorai.008G177300 Gossypium raimondii HOM05D001391 ORTHO05D005432 2.7e-25 118.6 86 69.8
Gohir.D12G164650 Gossypium hirsutum HOM05D001391 ORTHO05D005432 7.8e-25 117.1 86 69.8
CAN.G616.39 Capsicum annuum HOM05D001391 ORTHO05D005432 3.0e-24 115.2 88 69.3
AagrBONN_evm.TU.Sc2ySwM_228.3454 Anthoceros agrestis HOM05D001391 ORTHO05D005432 6.6e-24 114.0 88 61.4
Gorai.013G093700 Gossypium raimondii HOM05D001391 ORTHO05D005432 8.6e-24 113.6 97 60.8
CsaV3_6G033630 Cucumis sativus L. HOM05D001391 ORTHO05D005432 1.5e-23 112.8 72 79.2
FAN22G1389 Fragaria x ananassa HOM05D001391 ORTHO05D005432 4.3e-23 111.3 86 67.4
Gohir.D13G081800 Gossypium hirsutum HOM05D001391 ORTHO05D005432 4.3e-23 111.3 97 59.8
TAR622G0883 Trochodendron aralioides HOM05D001391 ORTHO05D005432 9.5e-23 110.2 123 50.4
Thhalv10022792m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 2.1e-22 109.0 85 58.8
Thhalv10022979m.g Eutrema salsugineum HOM05D001391 ORTHO05D005432 2.1e-22 109.0 85 58.8
PGSC0003DMG400028375 Solanum tuberosum HOM05D001391 ORTHO05D005432 4.7e-22 107.8 72 76.4
Haze_11913 Corylus avellana HOM05D001391 ORTHO05D005432 6.2e-22 107.5 73 72.6
QL03p071737 Quercus lobata HOM05D001391 ORTHO05D005432 4.0e-21 104.8 73 67.1
PSO478G2440 Papaver somniferum HOM05D001391 ORTHO05D005432 1.5e-20 102.8 73 69.9
Mapoly0041s0056 Marchantia polymorpha HOM05D001391 ORTHO05D005432 5.8e-20 100.9 87 58.6
DCAR_030039 Daucus carota HOM05D001391 ORTHO05D005432 6.4e-19 97.4 72 68.1
Hma1.2p1_3404F.1_g335810 Hydrangea macrophylla HOM05D001391 ORTHO05D005432 7.8e-17 90.5 86 57.0
Nitab4.5_0001487g0070 Nicotiana tabacum HOM05D001391 ORTHO05D005432 7.8e-17 90.5 72 69.4
Gohir.A13G082366 Gossypium hirsutum HOM05D001391 ORTHO05D005432 1.0e-16 90.1 71 64.8
Nitab4.5_0000231g0390 Nicotiana tabacum HOM05D001391 ORTHO05D005432 5.6e-15 84.3 69 68.1
ClCG08G010360 Citrullus lanatus HOM05D001391 ORTHO05D005432 2.1e-06 55.8 36 80.6


User provided reference genes

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