Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 2.5e-283 978.0 464 100.0
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 7.4e-243 843.6 458 84.5
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 6.7e-236 820.5 458 81.4
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 8.7e-236 820.1 458 82.8
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 1.1e-233 813.1 459 80.8
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 1.4e-233 812.8 458 80.3
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 6.9e-233 810.4 458 81.0
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 1.0e-231 806.6 458 79.9
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 6.5e-231 803.9 474 78.1
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 1.4e-230 802.7 458 79.7
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 1.4e-230 802.7 458 79.7
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 2.5e-230 802.0 458 79.5
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 4.2e-230 801.2 459 79.5
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 7.1e-230 800.4 458 79.0
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 1.6e-229 799.3 458 78.8
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.6e-229 799.3 458 79.3
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 1.6e-229 799.3 459 79.5
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 2.1e-229 798.9 459 79.7
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 2.1e-229 798.9 459 80.0
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 2.1e-229 798.9 458 79.3
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 2.7e-229 798.5 463 79.3
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 2.7e-229 798.5 463 79.3
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 2.7e-229 798.5 459 79.5
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 6.1e-229 797.3 459 79.3
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 1.3e-228 796.2 458 79.9
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 1.3e-228 796.2 458 79.0
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 1.8e-228 795.8 458 79.0
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 3.0e-228 795.0 458 78.6
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 5.1e-228 794.3 458 78.6
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 8.7e-228 793.5 458 79.0
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 1.9e-227 792.3 458 79.3
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 1.9e-227 792.3 458 78.8
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 1.3e-226 789.6 458 78.6
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 1.6e-226 789.3 458 78.8
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 1.6e-226 789.3 458 78.8
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 1.6e-226 789.3 458 77.9
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 2.2e-226 788.9 458 79.0
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 2.8e-226 788.5 458 78.2
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 1.1e-225 786.6 460 78.9
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 2.4e-225 785.4 458 76.9
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 2.0e-224 782.3 458 76.9
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 4.5e-224 781.2 458 78.4
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 4.5e-224 781.2 458 76.6
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 1.0e-223 780.0 459 77.8
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 1.3e-223 779.6 458 77.1
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 1.3e-223 779.6 458 77.1
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 2.9e-223 778.5 458 77.1
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 5.0e-223 777.7 458 77.1
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 2.5e-222 775.4 458 76.9
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 2.5e-222 775.4 458 76.6
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 9.4e-222 773.5 479 74.9
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 6.1e-221 770.8 458 76.0
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 1.0e-220 770.0 458 76.4
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 1.8e-220 769.2 458 74.7
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 1.1e-219 766.5 461 75.7
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 2.0e-219 765.8 458 78.2
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 5.7e-219 764.2 458 74.5
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 6.3e-218 760.8 462 74.5
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 6.3e-218 760.8 458 76.6
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 8.2e-218 760.4 459 74.5
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 1.8e-217 759.2 460 74.8
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 6.9e-217 757.3 456 75.2
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 1.5e-216 756.1 458 76.2
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 3.4e-216 755.0 458 75.1
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 3.4e-216 755.0 458 75.3
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 4.5e-216 754.6 458 75.3
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 4.5e-216 754.6 453 75.3
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 1.3e-215 753.1 456 73.7
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 2.2e-215 752.3 458 74.9
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 1.6e-213 746.1 458 74.5
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 1.8e-212 742.7 443 74.9
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 2.3e-212 742.3 458 74.2
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 6.7e-212 740.7 485 71.1
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 2.6e-211 738.8 458 73.1
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 7.4e-211 737.3 458 74.2
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 4.8e-210 734.6 458 72.3
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 1.1e-209 733.4 458 73.6
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 1.4e-209 733.0 458 74.0
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 2.5e-206 722.2 458 73.4
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 4.7e-205 718.0 458 72.5
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 2.3e-204 715.7 496 67.9
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 2.2e-202 709.1 469 68.7
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 1.5e-198 696.4 458 71.0
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 9.1e-193 677.2 500 64.4
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 5.9e-184 647.9 451 64.1
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 4.2e-182 641.7 451 63.2
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 4.2e-182 641.7 454 63.7
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 1.6e-181 639.8 463 66.1
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 2.0e-179 632.9 392 73.5
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 9.8e-179 630.6 472 62.3
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 7.3e-174 614.4 341 83.6
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 3.2e-169 599.0 338 81.1
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 3.2e-169 599.0 469 57.6
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.1e-165 586.3 338 79.9
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 6.2e-165 584.7 339 79.1
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.3e-164 582.8 339 79.1
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 4.0e-164 582.0 342 78.9
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 4.0e-164 582.0 342 78.9
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 6.6e-159 564.7 464 55.0
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 2.8e-157 559.3 323 78.6
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 3.6e-157 558.9 337 74.5
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 3.1e-156 555.8 338 75.7
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.4e-153 546.2 294 84.4
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 8.1e-149 531.2 337 72.7
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 4.6e-136 488.8 291 75.3
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 1.0e-135 487.6 302 74.8
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 3.0e-135 486.1 294 77.2
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 1.1e-132 477.6 277 76.9
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 3.1e-132 476.1 337 67.1
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 2.2e-130 469.9 339 62.2
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 7.1e-129 464.9 289 74.0
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 8.4e-122 441.4 288 71.9
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 2.1e-104 383.6 450 40.4
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 1.4e-97 360.9 484 37.0
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 7.7e-67 258.8 157 72.0
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.5e-54 218.0 110 88.2
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.5e-54 218.0 110 88.2
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.4e-54 216.9 110 87.3
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 2.3e-50 204.1 159 60.4
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 4.3e-33 146.7 100 70.0
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 1.3e-10 72.0 40 77.5


User provided reference genes

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