Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund24865 Selenicereus undatus HOM05D004244 ORTHO05D004964 1.2e-129 466.8 290 100.0
EL10Ac3g06716 Beta vulgaris HOM05D004244 ORTHO05D004964 3.9e-24 116.3 167 42.5
Sc19g0005660 Simmondsia chinensis HOM05D004244 ORTHO05D004964 4.7e-22 109.4 166 40.4
GSVIVG01001856001 Vitis vinifera HOM05D004244 ORTHO05D004964 8.9e-21 105.1 146 42.5
Aqoxy5G00098 Aquilegia oxysepala HOM05D004244 ORTHO05D004964 1.2e-20 104.8 155 41.3
CiPaw.01G175300 Carya illinoinensis HOM05D004244 ORTHO05D004964 1.3e-19 101.3 134 43.3
MBI07_g19046_MAGBIO Magnolia biondii HOM05D004244 ORTHO05D004964 8.4e-19 98.6 158 43.0
Lalb_Chr03g0036891 Lupinus albus HOM05D004244 ORTHO05D004964 1.4e-18 97.8 152 42.8
Nn1g03029 Nelumbo nucifera HOM05D004244 ORTHO05D004964 1.9e-18 97.4 203 36.0
Cpa.g.sc59.37 Carica papaya HOM05D004244 ORTHO05D004964 2.4e-18 97.1 144 39.6
Manes.03G156200 Manihot esculenta HOM05D004244 ORTHO05D004964 3.2e-18 96.7 212 32.5
FvH4_4g05190 Fragaria vesca HOM05D004244 ORTHO05D004964 4.2e-18 96.3 145 40.0
FAN17G1122 Fragaria x ananassa HOM05D004244 ORTHO05D004964 5.4e-18 95.9 145 40.0
CsaV3_2G012190 Cucumis sativus L. HOM05D004244 ORTHO05D004964 7.1e-18 95.5 158 40.5
Phvul.007G227000 Phaseolus vulgaris HOM05D004244 ORTHO05D004964 1.6e-17 94.4 145 40.7
QL06p021978 Quercus lobata HOM05D004244 ORTHO05D004964 1.6e-17 94.4 151 43.7
FAN12G2846 Fragaria x ananassa HOM05D004244 ORTHO05D004964 2.1e-17 94.0 145 39.3
Medtr1g045520 Medicago truncatula HOM05D004244 ORTHO05D004964 3.5e-17 93.2 142 42.3
Duzib052G0270 Durio zibethinus HOM05D004244 ORTHO05D004964 6.0e-17 92.4 143 42.0
Duzib052G0780 Durio zibethinus HOM05D004244 ORTHO05D004964 6.0e-17 92.4 143 42.0
PSO170G0851 Papaver somniferum HOM05D004244 ORTHO05D004964 7.8e-17 92.0 153 38.6
TAR633G1781 Trochodendron aralioides HOM05D004244 ORTHO05D004964 7.8e-17 92.0 146 41.1
Glyma.10G132400 Glycine max HOM05D004244 ORTHO05D004964 2.3e-16 90.5 152 38.2
Nn3g19830 Nelumbo nucifera HOM05D004244 ORTHO05D004964 2.3e-16 90.5 167 37.1
COL.COLO4_16006 Corchorus olitorius HOM05D004244 ORTHO05D004964 3.0e-16 90.1 142 39.4
PSO674G0105 Papaver somniferum HOM05D004244 ORTHO05D004964 3.9e-16 89.7 137 40.9
Prupe.1G052600 Prunus persica HOM05D004244 ORTHO05D004964 3.9e-16 89.7 150 38.0
Potri.010G063300 Populus trichocarpa HOM05D004244 ORTHO05D004964 6.6e-16 89.0 147 35.4
CDE11G0045 Ceratophyllum demersum HOM05D004244 ORTHO05D004964 8.7e-16 88.6 136 37.5
Atru.chr4.1873 Acer truncatum HOM05D004244 ORTHO05D004964 1.1e-15 88.2 133 41.4
Cfa014824 Carpinus fangiana HOM05D004244 ORTHO05D004964 1.1e-15 88.2 143 37.8
TAR362G0565 Trochodendron aralioides HOM05D004244 ORTHO05D004964 1.1e-15 88.2 154 37.0
Lj6g0017438 Lotus japonicus HOM05D004244 ORTHO05D004964 1.5e-15 87.8 166 39.2
arahy.Tifrunner.gnm1.ann1.QYR710 Arachis hypogaea HOM05D004244 ORTHO05D004964 1.9e-15 87.4 146 41.8
MD13G1225800 Malus domestica HOM05D004244 ORTHO05D004964 4.3e-15 86.3 153 38.6
arahy.Tifrunner.gnm1.ann1.9VYP7U Arachis hypogaea HOM05D004244 ORTHO05D004964 5.6e-15 85.9 146 41.1
TPR.G23981 Trifolium pratense HOM05D004244 ORTHO05D004964 5.6e-15 85.9 168 36.3
CANSAT78G2336 Cannabis sativa HOM05D004244 ORTHO05D004964 9.6e-15 85.1 145 38.6
MELO3C023072.2 Cucumis melo HOM05D004244 ORTHO05D004964 9.6e-15 85.1 158 38.0
MD16G1230800 Malus domestica HOM05D004244 ORTHO05D004964 1.3e-14 84.7 153 35.9
Peaxi162Scf00125g01118 Petunia axillaris HOM05D004244 ORTHO05D004964 2.1e-14 84.0 162 37.0
Actinidia11381 Actinidia chinensis HOM05D004244 ORTHO05D004964 3.6e-14 83.2 162 38.3
Ca_11893_v3 Cicer arietinum L. HOM05D004244 ORTHO05D004964 1.1e-13 81.6 167 34.1
Cc03_g06840 Coffea canephora HOM05D004244 ORTHO05D004964 1.1e-13 81.6 157 35.7
Haze_11497 Corylus avellana HOM05D004244 ORTHO05D004964 1.1e-13 81.6 129 41.1
GSVIVG01026322001 Vitis vinifera HOM05D004244 ORTHO05D004964 1.4e-13 81.3 135 38.5
Carub.0004s1471 Capsella rubella HOM05D004244 ORTHO05D004964 1.8e-13 80.9 139 38.8
Lsat_1_v5_gn_2_42020 Lactuca sativa HOM05D004244 ORTHO05D004964 2.4e-13 80.5 142 40.1
SGA_v2.0_scaffold398G50771 Striga asiatica HOM05D004244 ORTHO05D004964 2.4e-13 80.5 140 40.0
Thecc.04G269100 Theobroma cacao HOM05D004244 ORTHO05D004964 2.4e-13 80.5 139 39.6
AL4G28880 Arabidopsis lyrata HOM05D004244 ORTHO05D004964 3.1e-13 80.1 139 40.3
Ciclev10005346m.g Citrus clementina HOM05D004244 ORTHO05D004964 9.0e-13 78.6 163 38.0
Nitab4.5_0000867g0080 Nicotiana tabacum HOM05D004244 ORTHO05D004964 1.5e-12 77.8 171 33.3
CARHR127250 Cardamine hirsuta HOM05D004244 ORTHO05D004964 2.0e-12 77.4 140 38.6
Gohir.D09G232300 Gossypium hirsutum HOM05D004244 ORTHO05D004964 2.0e-12 77.4 139 36.0
Gorai.006G255200 Gossypium raimondii HOM05D004244 ORTHO05D004964 2.0e-12 77.4 139 36.0
Actinidia39939 Actinidia chinensis HOM05D004244 ORTHO05D004964 2.6e-12 77.0 141 39.0
AT2G33250 Arabidopsis thaliana HOM05D004244 ORTHO05D004964 2.6e-12 77.0 139 38.1
Duzib151G0660 Durio zibethinus HOM05D004244 ORTHO05D004964 2.6e-12 77.0 141 36.9
Manes.08G141600 Manihot esculenta HOM05D004244 ORTHO05D004964 2.6e-12 77.0 179 32.4
Eucgr.B01738 Eucalyptus grandis HOM05D004244 ORTHO05D004964 3.4e-12 76.6 133 37.6
Eucgr.H02883 Eucalyptus grandis HOM05D004244 ORTHO05D004964 4.5e-12 76.3 155 36.1
Actinidia34761 Actinidia chinensis HOM05D004244 ORTHO05D004964 5.8e-12 75.9 159 35.8
Dinv27132 Davidia involucrata HOM05D004244 ORTHO05D004964 5.8e-12 75.9 135 36.3
VMungo0720G2410 Vigna mungo HOM05D004244 ORTHO05D004964 5.8e-12 75.9 128 43.0
Gohir.A09G231200 Gossypium hirsutum HOM05D004244 ORTHO05D004964 7.6e-12 75.5 139 34.5
MSTRG.24646 Avicennia marina HOM05D004244 ORTHO05D004964 9.9e-12 75.1 134 35.1
PGR004G0368 Punica granatum HOM05D004244 ORTHO05D004964 9.9e-12 75.1 164 36.6
PGR031G0411 Punica granatum HOM05D004244 ORTHO05D004964 9.9e-12 75.1 127 34.6
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 1.3e-11 74.7 150 35.3
Actinidia38930 Actinidia chinensis HOM05D004244 ORTHO05D004964 1.7e-11 74.3 137 37.2
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 2.2e-11 73.9 173 34.1
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 2.2e-11 73.9 134 36.6
Nitab4.5_0000451g0020 Nicotiana tabacum HOM05D004244 ORTHO05D004964 2.2e-11 73.9 134 33.6
BcaC02g07850 Brassica carinata HOM05D004244 ORTHO05D004964 2.9e-11 73.6 147 35.4
Cpa.g.sc756.3 Carica papaya HOM05D004244 ORTHO05D004964 2.9e-11 73.6 134 40.3
Thhalv10017015m.g Eutrema salsugineum HOM05D004244 ORTHO05D004964 2.9e-11 73.6 158 36.7
Duzib266G0003 Durio zibethinus HOM05D004244 ORTHO05D004964 4.9e-11 72.8 59 57.6
Sp4g15550 Schrenkiella parvula HOM05D004244 ORTHO05D004964 4.9e-11 72.8 140 35.7
BcaC02g07847 Brassica carinata HOM05D004244 ORTHO05D004964 1.1e-10 71.6 134 35.8
A04p25560 Brassica napus HOM05D004244 ORTHO05D004964 1.1e-10 71.6 134 36.6
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 1.1e-10 71.6 183 32.2
Hma1.2p1_0112F.1_g054970 Hydrangea macrophylla HOM05D004244 ORTHO05D004964 1.1e-10 71.6 139 36.0
Sabra10G0043500 Salix brachista HOM05D004244 ORTHO05D004964 1.1e-10 71.6 135 36.3
SalBow3G0496 Salvia bowleyana HOM05D004244 ORTHO05D004964 1.4e-10 71.2 141 34.0
SalBow3G1459 Salvia bowleyana HOM05D004244 ORTHO05D004964 1.4e-10 71.2 141 34.0
Aa31LG5G4140 Aethionema arabicum HOM05D004244 ORTHO05D004964 3.2e-10 70.1 137 35.8
Rhsim09G0132600 Rhododendron simsii HOM05D004244 ORTHO05D004964 4.2e-10 69.7 179 31.3
SalBow1G0411 Salvia bowleyana HOM05D004244 ORTHO05D004964 7.1e-10 68.9 159 31.4
COL.COLO4_15535 Corchorus olitorius HOM05D004244 ORTHO05D004964 9.3e-10 68.6 251 27.9
Rhsim02G0048800 Rhododendron simsii HOM05D004244 ORTHO05D004964 9.3e-10 68.6 143 35.7
Sed0027895 Sechium edule HOM05D004244 ORTHO05D004964 9.3e-10 68.6 144 35.4
Sopen09g033990 Solanum pennellii HOM05D004244 ORTHO05D004964 9.3e-10 68.6 167 33.5
Gohir.D11G254600 Gossypium hirsutum HOM05D004244 ORTHO05D004964 1.6e-09 67.8 157 33.8
Gorai.007G273200 Gossypium raimondii HOM05D004244 ORTHO05D004964 1.6e-09 67.8 157 33.8
Nitab4.5_0008594g0020 Nicotiana tabacum HOM05D004244 ORTHO05D004964 2.1e-09 67.4 130 36.2
Ciclev10021373m.g Citrus clementina HOM05D004244 ORTHO05D004964 2.7e-09 67.0 167 32.9
ECA238G3737 Erigeron canadensis HOM05D004244 ORTHO05D004964 2.7e-09 67.0 135 32.6
Hund07175 Selenicereus undatus HOM05D004244 ORTHO05D004964 4.6e-09 66.2 147 32.7
TWI09G1213 Tripterygium wilfordii HOM05D004244 ORTHO05D004964 6.0e-09 65.9 136 32.4
Oeu010184.1 Olea europaea HOM05D004244 ORTHO05D004964 1.0e-08 65.1 139 35.3
Duzib106G0844 Durio zibethinus HOM05D004244 ORTHO05D004964 1.3e-08 64.7 140 36.4
Solyc09g091010.3 Solanum lycopersicum HOM05D004244 ORTHO05D004964 1.3e-08 64.7 167 32.3
THA.LOC104826102 Tarenaya hassleriana HOM05D004244 ORTHO05D004964 1.3e-08 64.7 142 36.6
ClCG06G007490 Citrullus lanatus HOM05D004244 ORTHO05D004964 2.3e-08 63.9 168 35.1
SalBow1G6706 Salvia bowleyana HOM05D004244 ORTHO05D004964 2.3e-08 63.9 77 44.2
ATR0723G041 Amborella trichopoda HOM05D004244 ORTHO05D004964 3.9e-08 63.2 139 30.9
HPP92_025817 Vanilla planifolia HOM05D004244 ORTHO05D004964 5.1e-08 62.8 151 32.5
Nitab4.5_0000841g0060 Nicotiana tabacum HOM05D004244 ORTHO05D004964 6.7e-08 62.4 177 32.2
Gohir.A11G244500 Gossypium hirsutum HOM05D004244 ORTHO05D004964 1.5e-07 61.2 151 33.8
Sopen04g021060 Solanum pennellii HOM05D004244 ORTHO05D004964 1.5e-07 61.2 148 30.4
PGSC0003DMG402001493 Solanum tuberosum HOM05D004244 ORTHO05D004964 1.5e-07 61.2 168 30.4
Lj2C46G4 Lonicera japonica HOM05D004244 ORTHO05D004964 3.3e-07 60.1 132 36.4
Atru.chr2.1111 Acer truncatum HOM05D004244 ORTHO05D004964 4.3e-07 59.7 184 30.4
Medtr4g088590 Medicago truncatula HOM05D004244 ORTHO05D004964 4.3e-07 59.7 80 43.8
Peaxi162Scf00077g00117 Petunia axillaris HOM05D004244 ORTHO05D004964 5.6e-07 59.3 135 34.8
unitig_26.g9547 Utricularia gibba HOM05D004244 ORTHO05D004964 7.4e-07 58.9 154 31.2
CAN.G4.41 Capsicum annuum HOM05D004244 ORTHO05D004964 1.3e-06 58.2 164 32.3
Migut.N00322 Erythranthe guttata HOM05D004244 ORTHO05D004964 1.3e-06 58.2 144 33.3
EL10Ac4g09763 Beta vulgaris HOM05D004244 ORTHO05D004964 2.8e-06 57.0 153 30.7
Psat1g024120 Pisum sativum HOM05D004244 ORTHO05D004964 2.8e-06 57.0 142 31.7
Migut.F02055 Erythranthe guttata HOM05D004244 ORTHO05D004964 8.1e-06 55.5 165 27.3
Thecc.05G266700 Theobroma cacao HOM05D004244 ORTHO05D004964 8.1e-06 55.5 133 32.3


User provided reference genes

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