Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund24861 Selenicereus undatus HOM05D005697 ORTHO05D006951 7.2e-114 414.1 232 100.0
AUR62035343 Chenopodium quinoa HOM05D005697 ORTHO05D006951 4.6e-60 235.3 231 61.9
AUR62035897 Chenopodium quinoa HOM05D005697 ORTHO05D006951 9.6e-58 227.6 265 55.8
EL10Ac3g06730 Beta vulgaris HOM05D005697 ORTHO05D006951 1.0e-51 207.6 236 55.9
CiPaw.02G104000 Carya illinoinensis HOM05D005697 ORTHO05D006951 6.0e-44 181.8 202 52.5
QL06p022167 Quercus lobata HOM05D005697 ORTHO05D006951 6.0e-44 181.8 199 53.3
Cfa014837 Carpinus fangiana HOM05D005697 ORTHO05D006951 1.3e-43 180.6 201 54.2
Sabra10G0044100 Salix brachista HOM05D005697 ORTHO05D006951 1.3e-43 180.6 200 54.5
Duzib151G0493 Durio zibethinus HOM05D005697 ORTHO05D006951 8.7e-43 177.9 205 50.2
CiPaw.01G174800 Carya illinoinensis HOM05D005697 ORTHO05D006951 1.1e-42 177.6 205 51.7
Cpa.g.sc59.48 Carica papaya HOM05D005697 ORTHO05D006951 4.3e-42 175.6 210 51.0
Ah.13g075010 Amaranthus hybridus HOM05D005697 ORTHO05D006951 5.6e-42 175.3 255 45.5
arahy.Tifrunner.gnm1.ann1.BKX7X4 Arachis hypogaea HOM05D005697 ORTHO05D006951 1.3e-41 174.1 198 51.0
FAN07G2767 Fragaria x ananassa HOM05D005697 ORTHO05D006951 2.1e-41 173.3 217 47.9
COL.COLO4_07143 Corchorus olitorius HOM05D005697 ORTHO05D006951 3.7e-41 172.6 221 47.5
Haze_11522 Corylus avellana HOM05D005697 ORTHO05D006951 3.7e-41 172.6 201 52.2
FAN22G1047 Fragaria x ananassa HOM05D005697 ORTHO05D006951 4.8e-41 172.2 217 47.5
Haze_11516 Corylus avellana HOM05D005697 ORTHO05D006951 8.1e-41 171.4 201 51.7
MD13G1226700 Malus domestica HOM05D005697 ORTHO05D006951 1.1e-40 171.0 219 48.9
Prupe.1G054100 Prunus persica HOM05D005697 ORTHO05D006951 1.1e-40 171.0 213 46.9
FvH4_4g05260 Fragaria vesca HOM05D005697 ORTHO05D006951 1.8e-40 170.2 218 47.7
FAN17G2424 Fragaria x ananassa HOM05D005697 ORTHO05D006951 1.8e-40 170.2 217 47.5
RcHm_v2.0_Chr4g0396171 Rosa chinensis HOM05D005697 ORTHO05D006951 1.8e-40 170.2 216 48.6
Thecc.04G218700 Theobroma cacao HOM05D005697 ORTHO05D006951 1.8e-40 170.2 202 49.0
Manes.03G155600 Manihot esculenta HOM05D005697 ORTHO05D006951 2.4e-40 169.9 211 52.6
Potri.010G062600 Populus trichocarpa HOM05D005697 ORTHO05D006951 4.0e-40 169.1 199 49.2
FAN12G1366 Fragaria x ananassa HOM05D005697 ORTHO05D006951 6.9e-40 168.3 218 47.2
Glyma.20G081000 Glycine max HOM05D005697 ORTHO05D006951 1.5e-39 167.2 201 48.8
arahy.Tifrunner.gnm1.ann1.1SMG72 Arachis hypogaea HOM05D005697 ORTHO05D006951 2.0e-39 166.8 203 47.8
Rhsim02G0049300 Rhododendron simsii HOM05D005697 ORTHO05D006951 2.0e-39 166.8 185 56.8
Sc19g0005740 Simmondsia chinensis HOM05D005697 ORTHO05D006951 9.9e-39 164.5 151 63.6
Dinv27139 Davidia involucrata HOM05D005697 ORTHO05D006951 8.4e-38 161.4 213 52.6
Cc03_g06970 Coffea canephora HOM05D005697 ORTHO05D006951 1.1e-37 161.0 194 51.0
Peaxi162Scf01007g00013 Petunia axillaris HOM05D005697 ORTHO05D006951 1.1e-37 161.0 218 47.7
Eucgr.H02876 Eucalyptus grandis HOM05D005697 ORTHO05D006951 1.9e-37 160.2 193 48.7
vmacro15494 Vaccinium macrocarpon HOM05D005697 ORTHO05D006951 1.9e-37 160.2 183 53.6
CANSAT78G1745 Cannabis sativa HOM05D005697 ORTHO05D006951 2.4e-37 159.8 194 47.4
Potri.008G174400 Populus trichocarpa HOM05D005697 ORTHO05D006951 3.2e-37 159.5 221 46.2
Glyma.10G130200 Glycine max HOM05D005697 ORTHO05D006951 4.2e-37 159.1 201 47.8
Nn1g03052 Nelumbo nucifera HOM05D005697 ORTHO05D006951 4.2e-37 159.1 215 45.1
Duzib212G0179 Durio zibethinus HOM05D005697 ORTHO05D006951 7.1e-37 158.3 211 48.8
TPR.G23989 Trifolium pratense HOM05D005697 ORTHO05D006951 1.2e-36 157.5 216 44.0
Manes.15G047800 Manihot esculenta HOM05D005697 ORTHO05D006951 2.1e-36 156.8 214 46.3
Sabra08G0132900 Salix brachista HOM05D005697 ORTHO05D006951 3.5e-36 156.0 202 48.0
VMungo0720G1671 Vigna mungo HOM05D005697 ORTHO05D006951 6.0e-36 155.2 201 47.3
TWI09G0842 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 1.3e-35 154.1 178 52.8
Atru.chr4.1856 Acer truncatum HOM05D005697 ORTHO05D006951 2.3e-35 153.3 238 42.4
Lsat_1_v5_gn_6_67840 Lactuca sativa HOM05D005697 ORTHO05D006951 2.3e-35 153.3 194 50.5
TAR365G1050 Trochodendron aralioides HOM05D005697 ORTHO05D006951 2.3e-35 153.3 215 47.0
Solyc12g097060.1 Solanum lycopersicum HOM05D005697 ORTHO05D006951 6.7e-35 151.8 209 49.3
ClCG06G017260 Citrullus lanatus HOM05D005697 ORTHO05D006951 8.7e-35 151.4 200 49.5
Oeu007537.1 Olea europaea HOM05D005697 ORTHO05D006951 1.1e-34 151.0 192 46.4
Nitab4.5_0002738g0060 Nicotiana tabacum HOM05D005697 ORTHO05D006951 1.9e-34 150.2 178 52.8
CSS0038279 Camellia sinensis var. sinensis HOM05D005697 ORTHO05D006951 5.6e-34 148.7 225 48.0
Nitab4.5_0001998g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 7.4e-34 148.3 203 51.7
Medtr1g046070 Medicago truncatula HOM05D005697 ORTHO05D006951 9.6e-34 147.9 235 43.8
Oeu008818.1 Olea europaea HOM05D005697 ORTHO05D006951 9.6e-34 147.9 201 46.3
Sed0013611 Sechium edule HOM05D005697 ORTHO05D006951 1.3e-33 147.5 179 53.6
PGSC0003DMG400008629 Solanum tuberosum HOM05D005697 ORTHO05D006951 1.6e-33 147.1 212 48.1
Sed0003887 Sechium edule HOM05D005697 ORTHO05D006951 2.8e-33 146.4 181 50.8
TWI53G2060 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 3.7e-33 146.0 197 48.7
SalBow3G1865 Salvia bowleyana HOM05D005697 ORTHO05D006951 4.8e-33 145.6 189 47.6
SalBow3G3550 Salvia bowleyana HOM05D005697 ORTHO05D006951 6.2e-33 145.2 191 46.6
Solyc09g091060.3 Solanum lycopersicum HOM05D005697 ORTHO05D006951 1.8e-32 143.7 211 45.0
ECA233G3140 Erigeron canadensis HOM05D005697 ORTHO05D006951 2.4e-32 143.3 183 50.8
MBI07_g15425_MAGBIO Magnolia biondii HOM05D005697 ORTHO05D006951 2.4e-32 143.3 187 48.1
MSTRG.21934 Avicennia marina HOM05D005697 ORTHO05D006951 4.0e-32 142.5 204 49.0
MSTRG.24645 Avicennia marina HOM05D005697 ORTHO05D006951 4.0e-32 142.5 234 44.9
CsaV3_1G001240 Cucumis sativus L. HOM05D005697 ORTHO05D006951 5.3e-32 142.1 188 47.9
TAR362G0923 Trochodendron aralioides HOM05D005697 ORTHO05D006951 5.3e-32 142.1 207 46.4
Gorai.006G218600 Gossypium raimondii HOM05D005697 ORTHO05D006951 6.9e-32 141.7 183 47.5
Gohir.D09G195200 Gossypium hirsutum HOM05D005697 ORTHO05D006951 9.0e-32 141.4 183 47.5
Lalb_Chr03g0036851 Lupinus albus HOM05D005697 ORTHO05D006951 1.2e-31 141.0 201 47.3
Phvul.007G233100 Phaseolus vulgaris HOM05D005697 ORTHO05D006951 1.5e-31 140.6 175 47.4
CAN.G812.40 Capsicum annuum HOM05D005697 ORTHO05D006951 2.6e-31 139.8 200 47.0
Lj6g0023034 Lotus japonicus HOM05D005697 ORTHO05D006951 1.3e-30 137.5 174 48.9
Sopen09g034040 Solanum pennellii HOM05D005697 ORTHO05D006951 6.5e-30 135.2 211 45.0
Nn3g19835 Nelumbo nucifera HOM05D005697 ORTHO05D006951 8.4e-30 134.8 214 45.3
MELO3C026270.2 Cucumis melo HOM05D005697 ORTHO05D006951 1.4e-29 134.0 188 48.9
Lalb_Chr19g0128591 Lupinus albus HOM05D005697 ORTHO05D006951 1.2e-28 131.0 181 45.9
Peaxi162Scf00125g01016 Petunia axillaris HOM05D005697 ORTHO05D006951 1.2e-28 131.0 221 43.9
Gohir.A09G201000 Gossypium hirsutum HOM05D005697 ORTHO05D006951 4.6e-28 129.0 170 45.3
DCAR_024305 Daucus carota HOM05D005697 ORTHO05D006951 7.9e-28 128.3 199 40.2
GSVIVG01001870001 Vitis vinifera HOM05D005697 ORTHO05D006951 3.9e-27 125.9 123 60.2
PSO339G1845 Papaver somniferum HOM05D005697 ORTHO05D006951 1.5e-26 124.0 217 39.6
Migut.N00325 Erythranthe guttata HOM05D005697 ORTHO05D006951 7.4e-26 121.7 187 44.9
Actinidia11384 Actinidia chinensis HOM05D005697 ORTHO05D006951 1.6e-25 120.6 111 60.4
THA.LOC104804567 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 2.8e-25 119.8 188 44.1
PSO063G5372 Papaver somniferum HOM05D005697 ORTHO05D006951 4.8e-25 119.0 218 39.0
SGA_v2.0_scaffold31G12607 Striga asiatica HOM05D005697 ORTHO05D006951 1.4e-24 117.5 186 43.0
Actinidia39942 Actinidia chinensis HOM05D005697 ORTHO05D006951 9.0e-24 114.8 155 45.8
THA.LOC104808734 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 5.9e-23 112.1 198 41.9
Ciclev10005805m.g Citrus clementina HOM05D005697 ORTHO05D006951 2.2e-22 110.2 173 44.5
THA.LOC104821627 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 2.9e-22 109.8 189 43.9
BraA07t28595Z Brassica rapa HOM05D005697 ORTHO05D006951 2.5e-21 106.7 196 41.3
Sp7g11140 Schrenkiella parvula HOM05D005697 ORTHO05D006951 7.2e-21 105.1 192 40.1
Aa31LG9G4120 Aethionema arabicum HOM05D005697 ORTHO05D006951 9.4e-21 104.8 213 39.0
CAN.G566.3 Capsicum annuum HOM05D005697 ORTHO05D006951 1.2e-20 104.4 105 57.1
BcaC02g09418 Brassica carinata HOM05D005697 ORTHO05D006951 2.1e-20 103.6 191 40.8
BolC4t25821H Brassica oleracea HOM05D005697 ORTHO05D006951 2.1e-20 103.6 191 40.8
A04p08640 Brassica napus HOM05D005697 ORTHO05D006951 3.6e-20 102.8 191 40.3
Carub.0007s2900 Capsella rubella HOM05D005697 ORTHO05D006951 3.6e-20 102.8 190 41.1
A07p08110 Brassica napus HOM05D005697 ORTHO05D006951 4.6e-20 102.4 181 43.6
CARHR219170 Cardamine hirsuta HOM05D005697 ORTHO05D006951 6.1e-20 102.1 214 38.8
BcaB06g26605 Brassica carinata HOM05D005697 ORTHO05D006951 7.9e-20 101.7 192 40.1
BcaC06g35669 Brassica carinata HOM05D005697 ORTHO05D006951 1.4e-19 100.9 196 40.8
C04p42400 Brassica napus HOM05D005697 ORTHO05D006951 1.4e-19 100.9 191 40.3
C07p12260 Brassica napus HOM05D005697 ORTHO05D006951 1.4e-19 100.9 196 40.8
BolC7t41693H Brassica oleracea HOM05D005697 ORTHO05D006951 1.4e-19 100.9 196 40.8
CARHR100340 Cardamine hirsuta HOM05D005697 ORTHO05D006951 1.8e-19 100.5 177 42.9
unitig_26.g9545 Utricularia gibba HOM05D005697 ORTHO05D006951 2.3e-19 100.1 203 33.5
BcaB03g16086 Brassica carinata HOM05D005697 ORTHO05D006951 3.0e-19 99.8 191 40.8
AL7G43130 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 5.1e-19 99.0 211 39.8
AT4G13540 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 1.1e-18 97.8 212 38.2
CDE05G2497 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 2.5e-18 96.7 209 37.8
Psat6g106680 Pisum sativum HOM05D005697 ORTHO05D006951 2.5e-18 96.7 91 56.0
Thhalv10026312m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 3.7e-17 92.8 163 40.5
Glyma.14G108200 Glycine max HOM05D005697 ORTHO05D006951 1.1e-16 91.3 101 51.5
Thhalv10002645m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 3.1e-16 89.7 178 44.9
HPP92_005453 Vanilla planifolia HOM05D005697 ORTHO05D006951 1.2e-15 87.8 204 33.3
Carub.0003s2459 Capsella rubella HOM05D005697 ORTHO05D006951 3.8e-14 82.8 135 41.5
CDE02G0931 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 5.0e-14 82.4 178 38.8
Sp3g22030 Schrenkiella parvula HOM05D005697 ORTHO05D006951 5.0e-14 82.4 203 36.0
AL3G39620 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 8.5e-14 81.6 110 45.5
AT3G23930 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 1.9e-13 80.5 112 44.6
Aa31LG8G10940 Aethionema arabicum HOM05D005697 ORTHO05D006951 9.4e-13 78.2 190 35.8
PGSC0003DMG400011585 Solanum tuberosum HOM05D005697 ORTHO05D006951 6.7e-11 72.0 141 40.4
BraA04t16558Z Brassica rapa HOM05D005697 ORTHO05D006951 2.8e-09 66.6 136 38.2
Nitab4.5_0000451g0070 Nicotiana tabacum HOM05D005697 ORTHO05D006951 1.8e-08 63.9 122 36.9


User provided reference genes

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