Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund24813 Selenicereus undatus HOM05D003641 ORTHO05D004915 3.3e-203 711.4 351 100.0
EL10Ac3g06892 Beta vulgaris HOM05D003641 ORTHO05D004915 5.3e-161 571.2 351 78.1
AUR62011998 Chenopodium quinoa HOM05D003641 ORTHO05D004915 5.3e-161 571.2 355 77.7
Sc13g0002360 Simmondsia chinensis HOM05D003641 ORTHO05D004915 4.5e-160 568.2 351 79.2
Manes.09G037400 Manihot esculenta HOM05D003641 ORTHO05D004915 1.7e-159 566.2 351 77.2
TWI53G2154 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 3.6e-157 558.5 351 75.5
Manes.08G042800 Manihot esculenta HOM05D003641 ORTHO05D004915 3.0e-156 555.4 351 75.5
TWI74G1529 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 1.3e-154 550.1 351 74.9
CsaV3_3G038670 Cucumis sativus L. HOM05D003641 ORTHO05D004915 1.7e-154 549.7 357 74.5
ClCG10G017650 Citrullus lanatus HOM05D003641 ORTHO05D004915 5.3e-153 544.7 354 74.9
Atru.chr8.1148 Acer truncatum HOM05D003641 ORTHO05D004915 9.1e-153 543.9 355 73.8
Ah.04g152830 Amaranthus hybridus HOM05D003641 ORTHO05D004915 9.1e-153 543.9 332 77.7
FvH4_6g21990 Fragaria vesca HOM05D003641 ORTHO05D004915 9.1e-153 543.9 351 73.5
FAN14G0097 Fragaria x ananassa HOM05D003641 ORTHO05D004915 9.1e-153 543.9 351 73.5
Cfa020150 Carpinus fangiana HOM05D003641 ORTHO05D004915 1.2e-152 543.5 351 73.8
Haze_20012 Corylus avellana HOM05D003641 ORTHO05D004915 1.6e-152 543.1 351 73.8
Hund19209 Selenicereus undatus HOM05D003641 ORTHO05D004915 1.6e-152 543.1 357 74.5
MELO3C009611.2 Cucumis melo HOM05D003641 ORTHO05D004915 2.7e-152 542.3 353 73.9
CiPaw.09G029000 Carya illinoinensis HOM05D003641 ORTHO05D004915 3.5e-152 542.0 352 73.6
CANSAT64G0207 Cannabis sativa HOM05D003641 ORTHO05D004915 4.5e-152 541.6 364 72.5
AUR62015343 Chenopodium quinoa HOM05D003641 ORTHO05D004915 4.5e-152 541.6 351 73.5
Duzib093G1627 Durio zibethinus HOM05D003641 ORTHO05D004915 7.7e-152 540.8 353 72.8
Aa31sc80G90 Aethionema arabicum HOM05D003641 ORTHO05D004915 1.0e-151 540.4 360 71.1
Cpa.g.sc85.60 Carica papaya HOM05D003641 ORTHO05D004915 1.3e-151 540.0 355 73.0
TAR636G0728 Trochodendron aralioides HOM05D003641 ORTHO05D004915 1.3e-151 540.0 351 72.9
Potri.006G194400 Populus trichocarpa HOM05D003641 ORTHO05D004915 3.8e-151 538.5 351 73.8
MD14G1054700 Malus domestica HOM05D003641 ORTHO05D004915 6.5e-151 537.7 352 72.7
TAR633G0428 Trochodendron aralioides HOM05D003641 ORTHO05D004915 6.5e-151 537.7 351 74.4
Gorai.012G099600 Gossypium raimondii HOM05D003641 ORTHO05D004915 1.1e-150 537.0 355 71.8
DCAR_017036 Daucus carota HOM05D003641 ORTHO05D004915 1.5e-150 536.6 351 72.4
Sabra06G0149100 Salix brachista HOM05D003641 ORTHO05D004915 1.5e-150 536.6 351 73.2
PGR004G2452 Punica granatum HOM05D003641 ORTHO05D004915 2.5e-150 535.8 354 73.7
CARHR086620 Cardamine hirsuta HOM05D003641 ORTHO05D004915 3.2e-150 535.4 360 70.3
Gohir.D04G089500 Gossypium hirsutum HOM05D003641 ORTHO05D004915 3.2e-150 535.4 355 71.5
AL3G23660 Arabidopsis lyrata HOM05D003641 ORTHO05D004915 4.2e-150 535.0 361 70.1
Duzib128G0491 Durio zibethinus HOM05D003641 ORTHO05D004915 5.5e-150 534.6 353 72.2
A05p37290 Brassica napus HOM05D003641 ORTHO05D004915 7.2e-150 534.3 351 71.2
Ciclev10012043m.g Citrus clementina HOM05D003641 ORTHO05D004915 7.2e-150 534.3 361 71.5
BcaB06g25550 Brassica carinata HOM05D003641 ORTHO05D004915 2.7e-149 532.3 351 72.1
C05p55760 Brassica napus HOM05D003641 ORTHO05D004915 2.7e-149 532.3 351 71.8
Sp3g10280 Schrenkiella parvula HOM05D003641 ORTHO05D004915 3.6e-149 531.9 360 70.0
AT3G12050 Arabidopsis thaliana HOM05D003641 ORTHO05D004915 6.1e-149 531.2 361 69.0
HanXRQChr01g0010591 Helianthus annuus HOM05D003641 ORTHO05D004915 6.1e-149 531.2 352 73.6
RcHm_v2.0_Chr3g0479291 Rosa chinensis HOM05D003641 ORTHO05D004915 1.0e-148 530.4 351 72.1
Gohir.A04G051900 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.4e-148 530.0 355 70.7
CAN.G960.10 Capsicum annuum HOM05D003641 ORTHO05D004915 1.8e-148 529.6 357 71.7
Thecc.05G174300 Theobroma cacao HOM05D003641 ORTHO05D004915 3.0e-148 528.9 355 71.0
CiPaw.10G025600 Carya illinoinensis HOM05D003641 ORTHO05D004915 5.2e-148 528.1 351 69.5
Sabra16G0062900 Salix brachista HOM05D003641 ORTHO05D004915 6.8e-148 527.7 351 70.9
COL.COLO4_29349 Corchorus olitorius HOM05D003641 ORTHO05D004915 1.2e-147 526.9 352 71.0
FAN02G1826 Fragaria x ananassa HOM05D003641 ORTHO05D004915 1.2e-147 526.9 351 71.2
Sed0007356 Sechium edule HOM05D003641 ORTHO05D004915 1.2e-147 526.9 352 70.7
Nitab4.5_0007274g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 2.0e-147 526.2 353 70.5
Eucgr.A02465 Eucalyptus grandis HOM05D003641 ORTHO05D004915 2.6e-147 525.8 358 70.7
THA.LOC104826776 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 2.6e-147 525.8 355 70.4
BraA05t22525Z Brassica rapa HOM05D003641 ORTHO05D004915 3.4e-147 525.4 351 70.7
FAN05G2657 Fragaria x ananassa HOM05D003641 ORTHO05D004915 3.4e-147 525.4 351 71.2
Potri.016G060100 Populus trichocarpa HOM05D003641 ORTHO05D004915 3.4e-147 525.4 356 71.1
PGSC0003DMG400011447 Solanum tuberosum HOM05D003641 ORTHO05D004915 3.4e-147 525.4 354 71.8
Oeu063867.1 Olea europaea HOM05D003641 ORTHO05D004915 5.7e-147 524.6 351 70.7
FAN09G3507 Fragaria x ananassa HOM05D003641 ORTHO05D004915 7.5e-147 524.2 351 70.9
Sopen10g029550 Solanum pennellii HOM05D003641 ORTHO05D004915 7.5e-147 524.2 354 70.6
QL07p024293 Quercus lobata HOM05D003641 ORTHO05D004915 1.3e-146 523.5 365 69.9
THA.LOC104809934 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 2.2e-146 522.7 352 71.0
Aqoxy1G00140 Aquilegia oxysepala HOM05D003641 ORTHO05D004915 6.3e-146 521.2 356 69.9
CDE05G2508 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 1.1e-145 520.4 351 70.4
Oeu006209.1 Olea europaea HOM05D003641 ORTHO05D004915 1.4e-145 520.0 367 68.4
SGA_v2.0_scaffold105G30499 Striga asiatica HOM05D003641 ORTHO05D004915 1.8e-145 519.6 356 70.2
Peaxi162Scf00258g00921 Petunia axillaris HOM05D003641 ORTHO05D004915 2.4e-145 519.2 354 69.2
Lj2A365T90 Lonicera japonica HOM05D003641 ORTHO05D004915 3.1e-145 518.8 352 70.5
Solyc10g078930.2 Solanum lycopersicum HOM05D003641 ORTHO05D004915 4.1e-145 518.5 354 69.5
vmacro07894 Vaccinium macrocarpon HOM05D003641 ORTHO05D004915 4.1e-145 518.5 352 70.5
MD12G1055300 Malus domestica HOM05D003641 ORTHO05D004915 7.0e-145 517.7 351 69.2
Hma1.2p1_0676F.1_g201930 Hydrangea macrophylla HOM05D003641 ORTHO05D004915 9.1e-145 517.3 351 71.8
Rhsim03G0004900 Rhododendron simsii HOM05D003641 ORTHO05D004915 1.2e-144 516.9 353 70.8
Lsat_1_v5_gn_5_164500 Lactuca sativa HOM05D003641 ORTHO05D004915 1.6e-144 516.5 345 72.8
MBI19_g17419_MAGBIO Magnolia biondii HOM05D003641 ORTHO05D004915 1.6e-144 516.5 351 70.1
ECA248G0025 Erigeron canadensis HOM05D003641 ORTHO05D004915 2.0e-144 516.2 352 71.0
Lju124A24T32 Lonicera japonica HOM05D003641 ORTHO05D004915 2.0e-144 516.2 354 69.8
Thhalv10021006m.g Eutrema salsugineum HOM05D003641 ORTHO05D004915 2.7e-144 515.8 360 68.1
CDE11G0833 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 3.5e-144 515.4 351 69.5
Cc06_g15710 Coffea canephora HOM05D003641 ORTHO05D004915 3.5e-144 515.4 353 70.3
SalBow6G5303 Salvia bowleyana HOM05D003641 ORTHO05D004915 7.7e-144 514.2 354 69.2
Prupe.7G080100 Prunus persica HOM05D003641 ORTHO05D004915 2.3e-143 512.7 354 69.8
BolC5t34243H Brassica oleracea HOM05D003641 ORTHO05D004915 5.0e-143 511.5 394 64.0
Carub.0003s1139 Capsella rubella HOM05D003641 ORTHO05D004915 1.9e-142 509.6 372 65.6
SGA_v2.0_scaffold69G23056 Striga asiatica HOM05D003641 ORTHO05D004915 1.9e-142 509.6 355 69.0
Dinv24057 Davidia involucrata HOM05D003641 ORTHO05D004915 2.5e-142 509.2 353 69.4
Lj1g0002782 Lotus japonicus HOM05D003641 ORTHO05D004915 2.5e-142 509.2 351 68.7
arahy.Tifrunner.gnm1.ann1.G8NWJQ Arachis hypogaea HOM05D003641 ORTHO05D004915 3.3e-142 508.8 360 68.6
Migut.J01850 Erythranthe guttata HOM05D003641 ORTHO05D004915 5.5e-142 508.1 357 68.1
arahy.Tifrunner.gnm1.ann1.86C462 Arachis hypogaea HOM05D003641 ORTHO05D004915 3.6e-141 505.4 360 68.1
ATR0598G178 Amborella trichopoda HOM05D003641 ORTHO05D004915 4.7e-141 505.0 352 69.9
MSTRG.19915 Avicennia marina HOM05D003641 ORTHO05D004915 8.0e-141 504.2 355 67.0
Psat3g067000 Pisum sativum HOM05D003641 ORTHO05D004915 1.8e-140 503.1 355 68.2
CSS0018208 Camellia sinensis var. sinensis HOM05D003641 ORTHO05D004915 5.2e-140 501.5 351 67.8
Glyma.03G146100 Glycine max HOM05D003641 ORTHO05D004915 2.6e-139 499.2 357 66.1
Ca_08533_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.3e-138 496.9 360 67.2
Ca_12045_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 2.2e-138 496.1 351 67.5
PSO135G0566 Papaver somniferum HOM05D003641 ORTHO05D004915 6.3e-138 494.6 357 66.4
Glyma.19G149300 Glycine max HOM05D003641 ORTHO05D004915 8.3e-138 494.2 355 66.5
PSO724G0609 Papaver somniferum HOM05D003641 ORTHO05D004915 8.3e-138 494.2 358 66.2
Phvul.001G143800 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 9.2e-137 490.7 361 65.4
Medtr7g093500 Medicago truncatula HOM05D003641 ORTHO05D004915 1.2e-136 490.3 356 67.1
VMungo1383G0826 Vigna mungo HOM05D003641 ORTHO05D004915 2.7e-136 489.2 356 66.0
unitig_899.g15167 Utricularia gibba HOM05D003641 ORTHO05D004915 3.5e-136 488.8 352 66.2
Zm00001eb037640 Zea mays HOM05D003641 ORTHO05D004915 4.5e-136 488.4 352 65.3
TPR.G30301 Trifolium pratense HOM05D003641 ORTHO05D004915 5.9e-136 488.0 351 66.1
Lj5g0013930 Lotus japonicus HOM05D003641 ORTHO05D004915 1.7e-135 486.5 358 66.8
Nitab4.5_0001137g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 3.9e-135 485.3 353 66.3
Phvul.007G261100 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 5.0e-135 485.0 352 66.2
Os08g0464000 Oryza sativa ssp. japonica HOM05D003641 ORTHO05D004915 6.6e-135 484.6 359 63.5
Lalb_Chr18g0047991 Lupinus albus HOM05D003641 ORTHO05D004915 1.1e-134 483.8 358 66.2
BcaC05g29294 Brassica carinata HOM05D003641 ORTHO05D004915 1.9e-134 483.0 351 67.2
VMungo0720G0815 Vigna mungo HOM05D003641 ORTHO05D004915 9.5e-134 480.7 353 66.0
Glyma.09G109200 Glycine max HOM05D003641 ORTHO05D004915 1.6e-133 479.9 352 65.1
Nitab4.5_0000105g0210 Nicotiana tabacum HOM05D003641 ORTHO05D004915 2.1e-133 479.6 348 68.4
Medtr0136s0060 Medicago truncatula HOM05D003641 ORTHO05D004915 1.4e-132 476.9 352 65.1
HPP92_005766 Vanilla planifolia HOM05D003641 ORTHO05D004915 1.8e-132 476.5 366 63.4
Zm00001eb177410 Zea mays HOM05D003641 ORTHO05D004915 2.3e-132 476.1 356 63.2
Nitab4.5_0002343g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 8.9e-132 474.2 355 67.0
AagrBONN_evm.TU.Sc2ySwM_344.3694 Anthoceros agrestis HOM05D003641 ORTHO05D004915 1.3e-130 470.3 351 65.0
Glyma.02G171100 Glycine max HOM05D003641 ORTHO05D004915 2.2e-130 469.5 351 63.2
HPP92_009321 Vanilla planifolia HOM05D003641 ORTHO05D004915 6.4e-130 468.0 361 62.6
Pp3c15_21400 Physcomitrium patens HOM05D003641 ORTHO05D004915 1.9e-129 466.5 356 62.9
Pp3c9_15400 Physcomitrium patens HOM05D003641 ORTHO05D004915 7.8e-128 461.1 355 62.8
SMO203G0054 Selaginella moellendorffii HOM05D003641 ORTHO05D004915 2.3e-127 459.5 351 61.3
unitig_746.g26803 Utricularia gibba HOM05D003641 ORTHO05D004915 2.3e-127 459.5 336 64.0
Mapoly0109s0023 Marchantia polymorpha HOM05D003641 ORTHO05D004915 1.5e-126 456.8 355 63.7
Nn7g35972 Nelumbo nucifera HOM05D003641 ORTHO05D004915 4.0e-124 448.7 300 73.0
Nn7g35971 Nelumbo nucifera HOM05D003641 ORTHO05D004915 3.2e-121 439.1 288 75.3
Psat6g123080 Pisum sativum HOM05D003641 ORTHO05D004915 1.7e-106 390.2 296 64.5
Actinidia22049 Actinidia chinensis HOM05D003641 ORTHO05D004915 1.4e-105 387.1 353 56.9
Gorai.012G099500 Gossypium raimondii HOM05D003641 ORTHO05D004915 7.1e-105 384.8 329 59.6
GSVIVG01033476001 Vitis vinifera HOM05D003641 ORTHO05D004915 8.1e-101 371.3 351 55.8
Actinidia14376 Actinidia chinensis HOM05D003641 ORTHO05D004915 1.4e-100 370.5 274 67.2
TPR.G35793 Trifolium pratense HOM05D003641 ORTHO05D004915 8.4e-98 361.3 294 59.9
Gohir.D04G089400 Gossypium hirsutum HOM05D003641 ORTHO05D004915 3.0e-79 299.7 213 69.5
PRCOL_00005901 Prasinoderma coloniale HOM05D003641 ORTHO05D004915 1.4e-76 290.8 355 44.2
BcaC09g48210 Brassica carinata HOM05D003641 ORTHO05D004915 3.5e-72 276.2 242 60.7
MCO07G236 Micromonas commoda HOM05D003641 ORTHO05D004915 5.7e-70 268.9 352 41.8
SEGI_39925 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 9.7e-70 268.1 272 50.7
Gohir.A04G052026 Gossypium hirsutum HOM05D003641 ORTHO05D004915 6.7e-63 245.4 156 71.2
Gohir.A04G052000 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.3e-61 241.1 175 69.7
Cre03.g199300 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D004915 2.9e-58 229.9 356 34.3
Actinidia32404 Actinidia chinensis HOM05D003641 ORTHO05D004915 2.7e-56 223.4 115 89.6
arahy.Tifrunner.gnm1.ann1.EPN7T6 Arachis hypogaea HOM05D003641 ORTHO05D004915 2.8e-53 213.4 141 71.6
arahy.Tifrunner.gnm1.ann1.VQQW03 Arachis hypogaea HOM05D003641 ORTHO05D004915 2.4e-52 210.3 126 79.4
Hund07686 Selenicereus undatus HOM05D003641 ORTHO05D011049 7.0e-36 155.6 186 48.4
SEGI_05882 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 7.0e-36 155.6 199 43.7
Hund07687 Selenicereus undatus HOM05D003641 ORTHO05D021213 1.2e-32 144.8 191 47.6
Glyma.09G095600 Glycine max HOM05D003641 ORTHO05D004915 8.0e-32 142.1 131 57.3
Ca_31327_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 3.0e-31 140.2 85 71.8
Ca_14569_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 6.8e-31 139.0 85 71.8
Ca_20435_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.5e-30 137.9 85 70.6
arahy.Tifrunner.gnm1.ann1.20Y790 Arachis hypogaea HOM05D003641 ORTHO05D004915 2.8e-29 133.7 106 66.0
Ca_09720_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 8.3e-29 132.1 85 68.2
HanXRQChr03g0083061 Helianthus annuus HOM05D003641 ORTHO05D004915 2.9e-26 123.6 138 46.4
EL10Ac8g19334 Beta vulgaris HOM05D003641 ORTHO05D027013 2.3e-23 114.0 75 70.7
Dinv18648 Davidia involucrata HOM05D003641 ORTHO05D004915 1.2e-22 111.7 59 86.4
Dinv26263 Davidia involucrata HOM05D003641 ORTHO05D004915 1.2e-22 111.7 59 86.4
Dinv18651 Davidia involucrata HOM05D003641 ORTHO05D004915 2.0e-22 110.9 63 81.0
Nn8g39306 Nelumbo nucifera HOM05D003641 ORTHO05D004915 1.2e-19 101.7 60 83.3
arahy.Tifrunner.gnm1.ann1.XYD4PT Arachis hypogaea HOM05D003641 ORTHO05D038899 2.0e-19 100.9 76 67.1
Ca_12039_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 2.0e-19 100.9 58 77.6
MCO11G399 Micromonas commoda HOM05D003641 ORTHO05D044219 1.3e-18 98.2 144 37.5
CBR_g18730 Chara braunii HOM05D003641 ORTHO05D004915 5.0e-18 96.3 55 80.0
Ca_03268_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 2.3e-15 87.4 59 69.5
Cre08.g358539 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D044219 4.0e-15 86.7 149 32.2
Ca_20824_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 5.8e-14 82.8 37 86.5
BolC1t05367H Brassica oleracea HOM05D003641 ORTHO05D038899 9.8e-14 82.0 49 73.5
TWI14G1341 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.2e-13 80.9 67 59.7
SGA_v2.0_scaffold200G41266 Striga asiatica HOM05D037212 ORTHO05D027013 3.2e-12 77.0 75 50.7
CsaV3_5G015400 Cucumis sativus L. HOM05D003641 ORTHO05D004915 3.9e-10 70.1 50 66.0
SGA_v2.0_scaffold196G40950 Striga asiatica HOM05D003641 ORTHO05D403144 3.9e-10 70.1 55 54.5
VMungo0464G0530 Vigna mungo HOM05D003641 ORTHO05D004915 8.6e-10 68.9 64 48.4
Peaxi162Scf00003g04539 Petunia axillaris HOM05D000312 ORTHO05D000221 3.3e-09 67.0 87 44.8
arahy.Tifrunner.gnm1.ann1.5I9U23 Arachis hypogaea HOM05D003641 ORTHO05D085625 5.6e-09 66.2 126 39.7
PGSC0003DMG400035352 Solanum tuberosum HOM05D003641 ORTHO05D004915 1.2e-06 58.5 63 46.0
MCO13G471 Micromonas commoda HOM05D003641 ORTHO05D049026 5.8e-06 56.2 209 26.8


User provided reference genes

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