Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund24792 Selenicereus undatus HOM05D007306 ORTHO05D009112 1.1e-81 306.6 159 100.0
AUR62015369 Chenopodium quinoa HOM05D007306 ORTHO05D009112 1.0e-26 124.0 171 52.0
AUR62012035 Chenopodium quinoa HOM05D007306 ORTHO05D009112 1.3e-26 123.6 163 49.7
Ah.04g152480 Amaranthus hybridus HOM05D007306 ORTHO05D009112 3.4e-22 109.0 162 45.1
QL07p023738 Quercus lobata HOM05D007306 ORTHO05D009112 3.4e-22 109.0 153 51.0
RcHm_v2.0_Chr3g0479681 Rosa chinensis HOM05D007306 ORTHO05D009112 1.7e-21 106.7 155 47.7
Nn2g15686 Nelumbo nucifera HOM05D007306 ORTHO05D009112 2.2e-21 106.3 161 47.2
CANSAT64G1677 Cannabis sativa HOM05D007306 ORTHO05D009112 2.9e-21 105.9 155 45.2
Thecc.05G171400 Theobroma cacao HOM05D007306 ORTHO05D009112 2.9e-21 105.9 159 46.5
TAR623G0307 Trochodendron aralioides HOM05D007306 ORTHO05D009112 4.9e-21 105.1 163 46.6
Aqoxy1G00127 Aquilegia oxysepala HOM05D007306 ORTHO05D009112 1.4e-20 103.6 156 44.9
FvH4_6g22320 Fragaria vesca HOM05D007306 ORTHO05D009112 1.4e-20 103.6 158 46.2
FAN05G3567 Fragaria x ananassa HOM05D007306 ORTHO05D009112 1.4e-20 103.6 158 46.2
Dinv14300 Davidia involucrata HOM05D007306 ORTHO05D009112 2.4e-20 102.8 156 47.4
FAN09G2453 Fragaria x ananassa HOM05D007306 ORTHO05D009112 4.2e-20 102.1 158 45.6
FAN14G0362 Fragaria x ananassa HOM05D007306 ORTHO05D009112 4.2e-20 102.1 158 45.6
Cfa020165 Carpinus fangiana HOM05D007306 ORTHO05D009112 5.4e-20 101.7 159 45.9
Atru.chr8.1112 Acer truncatum HOM05D007306 ORTHO05D009112 9.3e-20 100.9 157 45.2
FAN02G3291 Fragaria x ananassa HOM05D007306 ORTHO05D009112 1.2e-19 100.5 158 45.6
Gohir.D01G178600 Gossypium hirsutum HOM05D007306 ORTHO05D009112 1.2e-19 100.5 158 45.6
Gohir.A01G191300 Gossypium hirsutum HOM05D007306 ORTHO05D009112 1.6e-19 100.1 158 45.6
Gorai.002G224300 Gossypium raimondii HOM05D007306 ORTHO05D009112 1.6e-19 100.1 158 45.6
MD12G1057100 Malus domestica HOM05D007306 ORTHO05D009112 1.6e-19 100.1 154 45.5
Duzib093G0428 Durio zibethinus HOM05D007306 ORTHO05D009112 2.1e-19 99.8 160 48.1
Nitab4.5_0001137g0060 Nicotiana tabacum HOM05D007306 ORTHO05D009112 2.1e-19 99.8 158 46.2
Peaxi162Scf00258g00720 Petunia axillaris HOM05D007306 ORTHO05D009112 2.1e-19 99.8 155 47.1
Hma1.2p1_0386F.1_g141880 Hydrangea macrophylla HOM05D007306 ORTHO05D009112 2.7e-19 99.4 155 47.7
MD14G1057700 Malus domestica HOM05D007306 ORTHO05D009112 3.5e-19 99.0 154 45.5
Potri.006G192500 Populus trichocarpa HOM05D007306 ORTHO05D009112 6.0e-19 98.2 157 45.2
Cpa.g.sc85.66 Carica papaya HOM05D007306 ORTHO05D009112 1.0e-18 97.4 158 44.9
COL.COLO4_33982 Corchorus olitorius HOM05D007306 ORTHO05D009112 1.3e-18 97.1 157 46.5
vmacro07907 Vaccinium macrocarpon HOM05D007306 ORTHO05D009112 8.7e-18 94.4 154 47.4
BcaC02g12458 Brassica carinata HOM05D007306 ORTHO05D009112 1.1e-17 94.0 159 43.4
BcaC02g12459 Brassica carinata HOM05D007306 ORTHO05D009112 1.1e-17 94.0 159 43.4
BolC4t21964H Brassica oleracea HOM05D007306 ORTHO05D009112 1.1e-17 94.0 159 43.4
Potri.016G045700 Populus trichocarpa HOM05D007306 ORTHO05D009112 1.1e-17 94.0 158 43.7
PGR004G2053 Punica granatum HOM05D007306 ORTHO05D009112 1.1e-17 94.0 153 43.8
Prupe.7G077000 Prunus persica HOM05D007306 ORTHO05D009112 1.5e-17 93.6 156 43.6
CiPaw.09G030300 Carya illinoinensis HOM05D007306 ORTHO05D009112 2.5e-17 92.8 156 43.6
Rhsim03G0005900 Rhododendron simsii HOM05D007306 ORTHO05D009112 2.5e-17 92.8 152 47.4
C04p03260 Brassica napus HOM05D007306 ORTHO05D009112 3.3e-17 92.4 159 42.8
Cc06_g15870 Coffea canephora HOM05D007306 ORTHO05D009112 4.3e-17 92.0 158 43.7
PSO384G4645 Papaver somniferum HOM05D007306 ORTHO05D009112 4.3e-17 92.0 158 43.0
A05p02730 Brassica napus HOM05D007306 ORTHO05D009112 7.3e-17 91.3 159 42.1
BraA05t19265Z Brassica rapa HOM05D007306 ORTHO05D009112 7.3e-17 91.3 159 42.1
Actinidia32393 Actinidia chinensis HOM05D007306 ORTHO05D009112 9.6e-17 90.9 154 43.5
PSO339G5155 Papaver somniferum HOM05D007306 ORTHO05D009112 1.3e-16 90.5 158 43.0
Sed0004413 Sechium edule HOM05D007306 ORTHO05D009112 1.6e-16 90.1 157 42.0
Sopen03g039780 Solanum pennellii HOM05D007306 ORTHO05D009112 1.6e-16 90.1 152 44.7
EL10Ac3g06917 Beta vulgaris HOM05D007306 ORTHO05D009112 2.8e-16 89.4 162 37.7
BcaNung04408 Brassica carinata HOM05D007306 ORTHO05D009112 2.8e-16 89.4 155 42.6
Manes.08G044500 Manihot esculenta HOM05D007306 ORTHO05D009112 3.6e-16 89.0 155 43.2
Sc19g0007100 Simmondsia chinensis HOM05D007306 ORTHO05D009112 4.8e-16 88.6 103 51.5
Solyc03g120950.3 Solanum lycopersicum HOM05D007306 ORTHO05D009112 4.8e-16 88.6 152 44.1
CAN.G1143.4 Capsicum annuum HOM05D007306 ORTHO05D009112 6.2e-16 88.2 156 43.6
Migut.J01836 Erythranthe guttata HOM05D007306 ORTHO05D009112 1.1e-15 87.4 158 40.5
Nitab4.5_0007619g0010 Nicotiana tabacum HOM05D007306 ORTHO05D009112 1.1e-15 87.4 154 43.5
Sp4g24320 Schrenkiella parvula HOM05D007306 ORTHO05D009112 1.8e-15 86.7 155 39.4
PGSC0003DMG400002614 Solanum tuberosum HOM05D007306 ORTHO05D009112 2.4e-15 86.3 152 44.1
Aa31LG1G24110 Aethionema arabicum HOM05D007306 ORTHO05D009112 3.1e-15 85.9 155 40.6
AL4G40480 Arabidopsis lyrata HOM05D007306 ORTHO05D009112 3.1e-15 85.9 155 43.2
Lsat_1_v5_gn_5_163480 Lactuca sativa HOM05D007306 ORTHO05D009112 3.1e-15 85.9 154 42.2
TWI74G1393 Tripterygium wilfordii HOM05D007306 ORTHO05D009112 3.1e-15 85.9 155 45.8
AT2G42110 Arabidopsis thaliana HOM05D007306 ORTHO05D009112 5.3e-15 85.1 155 43.9
TPR.G22157 Trifolium pratense HOM05D007306 ORTHO05D009112 5.3e-15 85.1 159 39.6
Actinidia22036 Actinidia chinensis HOM05D007306 ORTHO05D009112 6.9e-15 84.7 161 44.1
MSTRG.19909 Avicennia marina HOM05D007306 ORTHO05D009112 9.0e-15 84.3 152 42.8
CARHR137170 Cardamine hirsuta HOM05D007306 ORTHO05D009112 9.0e-15 84.3 155 42.6
Manes.09G035400 Manihot esculenta HOM05D007306 ORTHO05D009112 9.0e-15 84.3 157 42.0
Glyma.09G111500 Glycine max HOM05D007306 ORTHO05D009112 1.2e-14 84.0 154 39.0
SalBow6G0438 Salvia bowleyana HOM05D007306 ORTHO05D009112 2.0e-14 83.2 152 39.5
SalBow6G2293 Salvia bowleyana HOM05D007306 ORTHO05D009112 2.0e-14 83.2 152 39.5
arahy.Tifrunner.gnm1.ann1.I9AM74 Arachis hypogaea HOM05D007306 ORTHO05D009112 2.6e-14 82.8 155 40.0
Lj1g0014955 Lotus japonicus HOM05D007306 ORTHO05D009112 2.6e-14 82.8 158 41.1
arahy.Tifrunner.gnm1.ann1.T0JWFY Arachis hypogaea HOM05D007306 ORTHO05D009112 9.9e-14 80.9 155 40.0
Psat3g068560 Pisum sativum HOM05D007306 ORTHO05D009112 9.9e-14 80.9 157 40.1
CiPaw.10G026400 Carya illinoinensis HOM05D007306 ORTHO05D009112 2.9e-13 79.3 156 40.4
Ciclev10013031m.g Citrus clementina HOM05D007306 ORTHO05D009112 3.8e-13 79.0 159 42.8
Thhalv10017403m.g Eutrema salsugineum HOM05D007306 ORTHO05D009112 6.4e-13 78.2 156 39.7
CsaV3_3G038820 Cucumis sativus L. HOM05D007306 ORTHO05D009112 8.4e-13 77.8 155 38.1
Sabra16G0049700 Salix brachista HOM05D007306 ORTHO05D009112 1.1e-12 77.4 130 42.3
Glyma.03G144700 Glycine max HOM05D007306 ORTHO05D009112 1.9e-12 76.6 159 39.6
HanXRQChr13g0390881 Helianthus annuus HOM05D007306 ORTHO05D009112 2.4e-12 76.3 154 39.0
Phvul.007G259800 Phaseolus vulgaris HOM05D007306 ORTHO05D009112 3.2e-12 75.9 157 35.7
VMungo0720G2523 Vigna mungo HOM05D007306 ORTHO05D009112 3.2e-12 75.9 160 36.9
MBI06_g29488_MAGBIO Magnolia biondii HOM05D007306 ORTHO05D009112 7.1e-12 74.7 151 41.1
Oeu063786.1 Olea europaea HOM05D007306 ORTHO05D009112 2.1e-11 73.2 143 41.3
ClCG10G017530 Citrullus lanatus HOM05D007306 ORTHO05D009112 2.7e-11 72.8 155 38.1
MELO3C009626.2 Cucumis melo HOM05D007306 ORTHO05D009112 2.7e-11 72.8 155 38.1
Duzib106G0602 Durio zibethinus HOM05D007306 ORTHO05D009112 2.7e-11 72.8 158 36.1
Lalb_Chr18g0047871 Lupinus albus HOM05D007306 ORTHO05D009112 2.7e-11 72.8 155 38.1
Carub.0004s2445 Capsella rubella HOM05D007306 ORTHO05D009112 3.5e-11 72.4 155 37.4
ECA248G3448 Erigeron canadensis HOM05D007306 ORTHO05D009112 1.0e-10 70.9 154 35.7
VMungo1383G3094 Vigna mungo HOM05D007306 ORTHO05D009112 1.0e-10 70.9 159 35.2
Medtr7g093220 Medicago truncatula HOM05D007306 ORTHO05D009112 1.7e-10 70.1 156 37.8
SGA_v2.0_scaffold69G23062 Striga asiatica HOM05D007306 ORTHO05D009112 2.3e-10 69.7 152 34.2
Phvul.001G142300 Phaseolus vulgaris HOM05D007306 ORTHO05D009112 3.9e-10 68.9 160 38.1
DCAR_017009 Daucus carota HOM05D004472 ORTHO05D007169 5.1e-10 68.6 149 38.3
Os03g0128300 Oryza sativa ssp. japonica HOM05D007306 ORTHO05D009112 3.6e-08 62.4 166 38.0
GSVIVG01033497001 Vitis vinifera HOM05D007306 ORTHO05D009112 3.6e-08 62.4 158 34.2
Glyma.19G147700 Glycine max HOM05D007306 ORTHO05D009112 4.0e-07 58.9 160 33.8
THA.LOC104802563 Tarenaya hassleriana HOM05D007306 ORTHO05D009112 1.5e-06 57.0 87 37.9
CDE02G0820 Ceratophyllum demersum HOM05D007306 ORTHO05D009112 4.5e-06 55.5 155 33.5


User provided reference genes

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