Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund24647 Selenicereus undatus HOM05D005503 ORTHO05D008949 2.2e-108 395.6 194 100.0
EL10Ac3g07150 Beta vulgaris HOM05D005503 ORTHO05D008949 6.2e-34 148.3 132 64.4
AUR62024521 Chenopodium quinoa HOM05D005503 ORTHO05D008949 4.4e-32 142.1 132 61.4
MBI13_g26145_MAGBIO Magnolia biondii HOM05D005503 ORTHO05D008949 8.6e-28 127.9 131 55.0
GSVIVG01005042001 Vitis vinifera HOM05D005503 ORTHO05D008949 8.6e-28 127.9 133 54.9
Sc13g0001540 Simmondsia chinensis HOM05D005503 ORTHO05D008949 4.3e-27 125.6 103 64.1
TAR636G0173 Trochodendron aralioides HOM05D005503 ORTHO05D008949 1.6e-26 123.6 138 52.2
Ah.13g077080 Amaranthus hybridus HOM05D005503 ORTHO05D008949 8.1e-26 121.3 90 70.0
Prupe.7G052400 Prunus persica HOM05D005503 ORTHO05D008949 6.8e-25 118.2 132 50.8
Rhsim03G0032200 Rhododendron simsii HOM05D005503 ORTHO05D008949 6.8e-25 118.2 133 48.9
Dinv39668 Davidia involucrata HOM05D005503 ORTHO05D008949 8.9e-25 117.9 127 55.1
Glyma.03G133400 Glycine max HOM05D005503 ORTHO05D008949 1.5e-24 117.1 89 65.2
Glyma.19G135200 Glycine max HOM05D005503 ORTHO05D008949 1.5e-24 117.1 89 65.2
Nn2g15105 Nelumbo nucifera HOM05D005503 ORTHO05D008949 1.5e-24 117.1 137 51.8
Sabra06G0033300 Salix brachista HOM05D005503 ORTHO05D008949 1.5e-24 117.1 139 47.5
CsaV3_3G040800 Cucumis sativus L. HOM05D005503 ORTHO05D008949 2.0e-24 116.7 128 48.4
Aqoxy2G00233 Aquilegia oxysepala HOM05D005503 ORTHO05D008949 2.6e-24 116.3 88 63.6
MD12G1083400 Malus domestica HOM05D005503 ORTHO05D008949 2.6e-24 116.3 135 50.4
Phvul.001G128900 Phaseolus vulgaris HOM05D005503 ORTHO05D008949 2.6e-24 116.3 82 68.3
Potri.006G047800 Populus trichocarpa HOM05D005503 ORTHO05D008949 4.4e-24 115.5 139 46.8
Psat3g074800 Pisum sativum HOM05D005503 ORTHO05D008949 5.8e-24 115.2 89 65.2
PGR004G2205 Punica granatum HOM05D005503 ORTHO05D008949 7.6e-24 114.8 90 63.3
CiPaw.10G036000 Carya illinoinensis HOM05D005503 ORTHO05D008949 9.9e-24 114.4 140 48.6
Haze_19781 Corylus avellana HOM05D005503 ORTHO05D008949 1.3e-23 114.0 87 65.5
FAN09G2222 Fragaria x ananassa HOM05D005503 ORTHO05D008949 1.3e-23 114.0 123 54.5
RcHm_v2.0_Chr3g0483941 Rosa chinensis HOM05D005503 ORTHO05D008949 1.7e-23 113.6 124 53.2
TPR.G7098 Trifolium pratense HOM05D005503 ORTHO05D008949 2.2e-23 113.2 89 65.2
FvH4_6g24610 Fragaria vesca HOM05D005503 ORTHO05D008949 2.9e-23 112.8 123 53.7
FAN14G5504 Fragaria x ananassa HOM05D005503 ORTHO05D008949 2.9e-23 112.8 123 53.7
Lalb_Chr20g0115621 Lupinus albus HOM05D005503 ORTHO05D008949 2.9e-23 112.8 141 47.5
VMungo1383G2568 Vigna mungo HOM05D005503 ORTHO05D008949 2.9e-23 112.8 82 65.9
Actinidia39197 Actinidia chinensis HOM05D005503 ORTHO05D008949 3.8e-23 112.5 126 52.4
MELO3C009814.2 Cucumis melo HOM05D005503 ORTHO05D008949 4.9e-23 112.1 89 60.7
FAN05G5816 Fragaria x ananassa HOM05D005503 ORTHO05D008949 4.9e-23 112.1 123 53.7
ECA247G0412 Erigeron canadensis HOM05D005503 ORTHO05D008949 6.4e-23 111.7 87 65.5
FAN02G3508 Fragaria x ananassa HOM05D005503 ORTHO05D008949 6.4e-23 111.7 123 53.7
Ciclev10006881m.g Citrus clementina HOM05D005503 ORTHO05D008949 8.4e-23 111.3 129 48.8
Lj1g0008024 Lotus japonicus HOM05D005503 ORTHO05D008949 8.4e-23 111.3 90 65.6
Lalb_Chr20g0110371 Lupinus albus HOM05D005503 ORTHO05D008949 8.4e-23 111.3 130 50.0
Gohir.A09G120500 Gossypium hirsutum HOM05D005503 ORTHO05D008949 1.4e-22 110.5 79 67.1
Gohir.D09G116600 Gossypium hirsutum HOM05D005503 ORTHO05D008949 1.4e-22 110.5 79 67.1
Gorai.006G134900 Gossypium raimondii HOM05D005503 ORTHO05D008949 1.4e-22 110.5 79 67.1
Medtr7g090930 Medicago truncatula HOM05D005503 ORTHO05D008949 1.4e-22 110.5 132 50.8
Thecc.05G146600 Theobroma cacao HOM05D005503 ORTHO05D008949 1.4e-22 110.5 81 67.9
ClCG10G015610 Citrullus lanatus HOM05D005503 ORTHO05D008949 1.9e-22 110.2 89 60.7
COL.COLO4_36524 Corchorus olitorius HOM05D005503 ORTHO05D008949 1.9e-22 110.2 80 68.8
Cpa.g.sc1079.1 Carica papaya HOM05D005503 ORTHO05D008949 2.4e-22 109.8 71 71.8
Ca_22958_v3 Cicer arietinum L. HOM05D005503 ORTHO05D008949 2.4e-22 109.8 132 50.8
Duzib093G0766 Durio zibethinus HOM05D005503 ORTHO05D008949 2.4e-22 109.8 80 68.8
Ah.04g151390 Amaranthus hybridus HOM05D005503 ORTHO05D008949 3.2e-22 109.4 67 80.6
Hma1.2p1_0110F.1_g052960 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 4.1e-22 109.0 129 49.6
Potri.016G044001 Populus trichocarpa HOM05D005503 ORTHO05D008949 7.1e-22 108.2 76 71.1
vmacro21945 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 7.1e-22 108.2 125 47.2
Atru.chr1.1203 Acer truncatum HOM05D005503 ORTHO05D008949 9.2e-22 107.8 86 62.8
Lsat_1_v5_gn_9_32141 Lactuca sativa HOM05D005503 ORTHO05D008949 1.6e-21 107.1 83 66.3
ATR0721G098 Amborella trichopoda HOM05D005503 ORTHO05D008949 2.1e-21 106.7 62 82.3
CANSAT80G2315 Cannabis sativa HOM05D005503 ORTHO05D008949 2.1e-21 106.7 83 67.5
Manes.09G011000 Manihot esculenta HOM05D005503 ORTHO05D008949 3.5e-21 105.9 72 73.6
arahy.Tifrunner.gnm1.ann1.BJA8E7 Arachis hypogaea HOM05D005503 ORTHO05D008949 6.0e-21 105.1 72 75.0
arahy.Tifrunner.gnm1.ann1.Z9GIA8 Arachis hypogaea HOM05D005503 ORTHO05D008949 7.8e-21 104.8 184 41.3
CSS0039750 Camellia sinensis var. sinensis HOM05D005503 ORTHO05D008949 7.8e-21 104.8 79 67.1
Cc06_g18190 Coffea canephora HOM05D005503 ORTHO05D008949 1.7e-20 103.6 67 73.1
Sed0013086 Sechium edule HOM05D005503 ORTHO05D008949 1.7e-20 103.6 69 71.0
Peaxi162Scf00130g00911 Petunia axillaris HOM05D005503 ORTHO05D008949 2.3e-20 103.2 141 45.4
QL07p004035 Quercus lobata HOM05D005503 ORTHO05D008949 3.9e-20 102.4 81 63.0
Oeu033023.1 Olea europaea HOM05D005503 ORTHO05D008949 6.6e-20 101.7 70 72.9
CARHR209280 Cardamine hirsuta HOM05D005503 ORTHO05D008949 8.6e-20 101.3 65 73.8
HPP92_027974 Vanilla planifolia HOM05D005503 ORTHO05D008949 8.6e-20 101.3 70 68.6
Thhalv10016002m.g Eutrema salsugineum HOM05D005503 ORTHO05D008949 1.5e-19 100.5 65 72.3
Nitab4.5_0001618g0220 Nicotiana tabacum HOM05D005503 ORTHO05D008949 1.5e-19 100.5 81 61.7
TWI77G0247 Tripterygium wilfordii HOM05D005503 ORTHO05D008949 1.9e-19 100.1 128 46.9
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 2.5e-19 99.8 65 73.8
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 2.5e-19 99.8 65 73.8
HanXRQChr10g0298211 Helianthus annuus HOM05D005503 ORTHO05D008949 2.5e-19 99.8 89 59.6
THA.LOC104816402 Tarenaya hassleriana HOM05D005503 ORTHO05D008949 2.5e-19 99.8 67 73.1
Oeu006918.1 Olea europaea HOM05D005503 ORTHO05D008949 4.3e-19 99.0 132 45.5
Nitab4.5_0000826g0100 Nicotiana tabacum HOM05D005503 ORTHO05D008949 5.6e-19 98.6 83 59.0
Aa31LG1G21320 Aethionema arabicum HOM05D005503 ORTHO05D008949 7.3e-19 98.2 128 46.1
Eucgr.A02305 Eucalyptus grandis HOM05D005503 ORTHO05D008949 7.3e-19 98.2 90 61.1
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 9.6e-19 97.8 65 72.3
Sp6g38760 Schrenkiella parvula HOM05D005503 ORTHO05D008949 9.6e-19 97.8 65 70.8
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 1.2e-18 97.4 62 75.8
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 2.1e-18 96.7 65 70.8
AL6G13590 Arabidopsis lyrata HOM05D005503 ORTHO05D008949 2.8e-18 96.3 65 72.3
Carub.0006s0293 Capsella rubella HOM05D005503 ORTHO05D008949 2.8e-18 96.3 65 70.8
Duzib128G0213 Durio zibethinus HOM05D005503 ORTHO05D008949 2.8e-18 96.3 139 39.6
AT5G04000 Arabidopsis thaliana HOM05D005503 ORTHO05D008949 6.2e-18 95.1 62 74.2
DCAR_020514 Daucus carota HOM05D005503 ORTHO05D008949 6.2e-18 95.1 92 54.3
Dinv18679 Davidia involucrata HOM05D005503 ORTHO05D008949 6.2e-18 95.1 75 64.0
Solyc04g016420.3 Solanum lycopersicum HOM05D005503 ORTHO05D008949 2.4e-17 93.2 83 59.0
Sopen04g008520 Solanum pennellii HOM05D005503 ORTHO05D008949 2.4e-17 93.2 83 59.0
PGSC0003DMG400012701 Solanum tuberosum HOM05D005503 ORTHO05D008949 2.4e-17 93.2 83 59.0
Migut.J01714 Erythranthe guttata HOM05D005503 ORTHO05D008949 3.1e-17 92.8 120 45.8
CDE09G0956 Ceratophyllum demersum HOM05D003424 ORTHO05D004025 1.2e-16 90.9 69 69.6
CAN.G1237.11 Capsicum annuum HOM05D005503 ORTHO05D008949 2.0e-16 90.1 83 55.4
SGA_v2.0_scaffold69G23127 Striga asiatica HOM05D005503 ORTHO05D008949 5.8e-16 88.6 66 68.2
DCAR_013615 Daucus carota HOM05D005503 ORTHO05D008949 2.9e-15 86.3 89 52.8
Mapoly0048s0063 Marchantia polymorpha HOM05D005503 ORTHO05D008949 1.1e-14 84.3 101 45.5
Os05g0496000 Oryza sativa ssp. japonica HOM05D005503 ORTHO05D008949 1.1e-14 84.3 71 57.7
unitig_22.g6053 Utricularia gibba HOM05D005503 ORTHO05D008949 1.4e-14 84.0 66 62.1
Zm00001eb291660 Zea mays HOM05D005503 ORTHO05D008949 1.9e-14 83.6 82 51.2
PSO063G5603 Papaver somniferum HOM05D005503 ORTHO05D008949 4.2e-14 82.4 94 48.9
SalBow6G3706 Salvia bowleyana HOM05D005503 ORTHO05D008949 4.2e-14 82.4 60 65.0
SalBow6G4155 Salvia bowleyana HOM05D005503 ORTHO05D008949 4.2e-14 82.4 60 65.0
vmacro21963 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 2.7e-13 79.7 57 68.4
Hma1.2p1_0005F.1_g004410 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 3.9e-12 75.9 67 61.2
HPP92_018218 Vanilla planifolia HOM05D005503 ORTHO05D008949 5.6e-11 72.0 59 57.6
Rhsim04G0037200 Rhododendron simsii HOM05D005503 ORTHO05D008949 1.3e-07 60.8 94 38.3
Rhsim04G0170300 Rhododendron simsii HOM05D005503 ORTHO05D008949 2.9e-07 59.7 89 39.3


User provided reference genes

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