Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund24619 Selenicereus undatus HOM05D003729 ORTHO05D004384 1.6e-116 422.9 243 100.0
EL10Ac3g07219 Beta vulgaris HOM05D003729 ORTHO05D004384 1.3e-52 210.7 161 67.7
Ah.04g151040 Amaranthus hybridus HOM05D003729 ORTHO05D004384 4.2e-48 195.7 161 62.7
AUR62023904 Chenopodium quinoa HOM05D003729 ORTHO05D004384 1.2e-42 177.6 146 63.7
CSS0000349 Camellia sinensis var. sinensis HOM05D003729 ORTHO05D004384 1.7e-41 173.7 163 60.7
GSVIVG01033615001 Vitis vinifera HOM05D003729 ORTHO05D004384 5.0e-41 172.2 162 58.6
Gohir.A11G307900 Gossypium hirsutum HOM05D003729 ORTHO05D004384 6.5e-41 171.8 174 55.2
Duzib106G1244 Durio zibethinus HOM05D003729 ORTHO05D004384 2.5e-40 169.9 161 57.8
AUR62003735 Chenopodium quinoa HOM05D003729 ORTHO05D004384 3.2e-40 169.5 146 60.3
PGR031G2313 Punica granatum HOM05D003729 ORTHO05D004384 4.2e-40 169.1 158 59.5
Gohir.D11G323300 Gossypium hirsutum HOM05D003729 ORTHO05D004384 5.5e-40 168.7 174 56.3
Gorai.007G353300 Gossypium raimondii HOM05D003729 ORTHO05D004384 5.5e-40 168.7 174 56.3
COL.COLO4_31341 Corchorus olitorius HOM05D003729 ORTHO05D004384 7.2e-40 168.3 180 50.6
QL06p031735 Quercus lobata HOM05D003729 ORTHO05D004384 9.4e-40 167.9 178 55.1
VMungo0464G0714 Vigna mungo HOM05D003729 ORTHO05D004384 1.2e-39 167.5 164 56.7
Thecc.05G137800 Theobroma cacao HOM05D003729 ORTHO05D004384 3.6e-39 166.0 176 53.4
Rhsim04G0111000 Rhododendron simsii HOM05D003729 ORTHO05D004384 6.1e-39 165.2 163 58.3
Dinv34365 Davidia involucrata HOM05D003729 ORTHO05D004384 1.0e-38 164.5 163 57.1
Glyma.07G106900 Glycine max HOM05D003729 ORTHO05D004384 1.0e-38 164.5 164 55.5
Thecc.05G137500 Theobroma cacao HOM05D003729 ORTHO05D004384 1.0e-38 164.5 176 53.4
Glyma.09G171000 Glycine max HOM05D003729 ORTHO05D004384 1.4e-38 164.1 164 54.9
CiPaw.09G047000 Carya illinoinensis HOM05D003729 ORTHO05D004384 1.8e-38 163.7 162 58.6
Dinv26813 Davidia involucrata HOM05D003729 ORTHO05D004384 3.0e-38 162.9 163 56.4
Phvul.004G146700 Phaseolus vulgaris HOM05D003729 ORTHO05D004384 5.2e-38 162.2 165 57.0
Cc06_g19080 Coffea canephora HOM05D003729 ORTHO05D004384 6.8e-38 161.8 165 58.8
Hma1.2p1_0402F.1_g145090 Hydrangea macrophylla HOM05D003729 ORTHO05D004384 8.8e-38 161.4 164 54.3
Prupe.5G014500 Prunus persica HOM05D003729 ORTHO05D004384 8.8e-38 161.4 161 57.8
Haze_16229 Corylus avellana HOM05D003729 ORTHO05D004384 1.2e-37 161.0 168 54.8
Psat5g246840 Pisum sativum HOM05D003729 ORTHO05D004384 1.5e-37 160.6 160 50.0
Cfa020012 Carpinus fangiana HOM05D003729 ORTHO05D004384 2.6e-37 159.8 166 56.6
Eucgr.B01227 Eucalyptus grandis HOM05D003729 ORTHO05D004384 2.6e-37 159.8 162 55.6
TAR629G1039 Trochodendron aralioides HOM05D003729 ORTHO05D004384 2.6e-37 159.8 168 56.0
Lalb_Chr06g0173631 Lupinus albus HOM05D003729 ORTHO05D004384 4.4e-37 159.1 161 54.7
AUR62016564 Chenopodium quinoa HOM05D003729 ORTHO05D004384 9.7e-37 157.9 148 57.4
Nn7g37723 Nelumbo nucifera HOM05D003729 ORTHO05D004384 9.7e-37 157.9 165 55.2
Lj1A1094G14 Lonicera japonica HOM05D003729 ORTHO05D004384 2.2e-36 156.8 156 57.1
Manes.15G116200 Manihot esculenta HOM05D003729 ORTHO05D004384 2.8e-36 156.4 174 54.6
Nitab4.5_0000381g0340 Nicotiana tabacum HOM05D003729 ORTHO05D004384 6.3e-36 155.2 164 54.9
Nitab4.5_0005447g0050 Nicotiana tabacum HOM05D003729 ORTHO05D004384 6.3e-36 155.2 161 55.9
Haze_20214 Corylus avellana HOM05D003729 ORTHO05D004384 1.1e-35 154.5 167 55.7
vmacro09025 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 1.8e-35 153.7 163 55.8
Peaxi162Scf00146g00613 Petunia axillaris HOM05D003729 ORTHO05D004384 2.4e-35 153.3 157 58.6
DCAR_013638 Daucus carota HOM05D003729 ORTHO05D004384 3.1e-35 152.9 168 53.0
Atru.chr11.1446 Acer truncatum HOM05D003729 ORTHO05D004384 5.3e-35 152.1 179 52.0
Atru.chr11.1476 Acer truncatum HOM05D003729 ORTHO05D004384 5.3e-35 152.1 179 52.0
Sopen10g034990 Solanum pennellii HOM05D003729 ORTHO05D004384 9.1e-35 151.4 164 53.7
MBI04_g42401_MAGBIO Magnolia biondii HOM05D003729 ORTHO05D004384 1.6e-34 150.6 170 52.9
Ca_11233_v3 Cicer arietinum L. HOM05D003729 ORTHO05D004384 2.0e-34 150.2 161 49.7
THA.LOC104802558 Tarenaya hassleriana HOM05D003729 ORTHO05D004384 3.5e-34 149.4 172 51.7
arahy.Tifrunner.gnm1.ann1.HP2N24 Arachis hypogaea HOM05D003729 ORTHO05D004384 5.9e-34 148.7 163 51.5
arahy.Tifrunner.gnm1.ann1.UC9EW5 Arachis hypogaea HOM05D003729 ORTHO05D004384 5.9e-34 148.7 163 51.5
Haze_20210 Corylus avellana HOM05D003729 ORTHO05D004384 5.9e-34 148.7 167 53.9
Actinidia38159 Actinidia chinensis HOM05D003729 ORTHO05D004384 1.0e-33 147.9 159 53.5
FvH4_2g11640 Fragaria vesca HOM05D003729 ORTHO05D004384 1.0e-33 147.9 155 53.5
FAN15G2573 Fragaria x ananassa HOM05D003729 ORTHO05D004384 1.0e-33 147.9 155 53.5
FAN24G0230 Fragaria x ananassa HOM05D003729 ORTHO05D004384 1.0e-33 147.9 155 53.5
Sed0006249 Sechium edule HOM05D003729 ORTHO05D004384 1.7e-33 147.1 145 55.9
Aqoxy3G00221 Aquilegia oxysepala HOM05D003729 ORTHO05D004384 2.9e-33 146.4 168 54.8
Prupe.8G004300 Prunus persica HOM05D003729 ORTHO05D004384 2.9e-33 146.4 194 47.4
CAN.G1099.5 Capsicum annuum HOM05D003729 ORTHO05D004384 3.8e-33 146.0 167 52.1
HanXRQChr12g0359771 Helianthus annuus HOM05D003729 ORTHO05D004384 3.8e-33 146.0 169 52.1
TPR.G32867 Trifolium pratense HOM05D003729 ORTHO05D004384 6.5e-33 145.2 161 48.4
Potri.016G037400 Populus trichocarpa HOM05D003729 ORTHO05D004384 8.5e-33 144.8 166 54.8
Medtr2g081080 Medicago truncatula HOM05D003729 ORTHO05D004384 1.9e-32 143.7 160 46.2
RcHm_v2.0_Chr6g0270881 Rosa chinensis HOM05D003729 ORTHO05D004384 2.5e-32 143.3 156 50.6
Sabra16G0039300 Salix brachista HOM05D003729 ORTHO05D004384 3.2e-32 142.9 163 56.4
Lj1g0021267 Lotus japonicus HOM05D003729 ORTHO05D004384 4.2e-32 142.5 165 50.3
Lj6g0002169 Lotus japonicus HOM05D003729 ORTHO05D004384 4.2e-32 142.5 165 50.3
Sabra16G0044200 Salix brachista HOM05D003729 ORTHO05D004384 9.4e-32 141.4 163 55.8
ClCG09G015010 Citrullus lanatus HOM05D003729 ORTHO05D004384 2.7e-31 139.8 161 49.7
CANSAT64G1452 Cannabis sativa HOM05D003729 ORTHO05D004384 3.6e-31 139.4 172 51.2
Lsat_1_v5_gn_5_75341 Lactuca sativa HOM05D003729 ORTHO05D004384 8.0e-31 138.3 160 51.9
HanXRQChr10g0311271 Helianthus annuus HOM05D003729 ORTHO05D004384 1.4e-30 137.5 156 51.3
MELO3C018665.2 Cucumis melo HOM05D003729 ORTHO05D004384 1.8e-30 137.1 146 52.1
Sp5g05590 Schrenkiella parvula HOM05D003729 ORTHO05D004384 1.8e-30 137.1 163 52.8
Aa31LG10G11890 Aethionema arabicum HOM05D003729 ORTHO05D004384 4.0e-30 136.0 166 49.4
AL5G38440 Arabidopsis lyrata HOM05D003729 ORTHO05D004384 4.0e-30 136.0 168 50.0
BcaC07g40019 Brassica carinata HOM05D003729 ORTHO05D004384 4.0e-30 136.0 159 52.8
CsaV3_7G006250 Cucumis sativus L. HOM05D003729 ORTHO05D004384 6.8e-30 135.2 146 51.4
ECA234G1736 Erigeron canadensis HOM05D003729 ORTHO05D004384 8.8e-30 134.8 162 50.6
BolC8t50846H Brassica oleracea HOM05D003729 ORTHO05D004384 2.0e-29 133.7 159 52.2
PSO782G2431 Papaver somniferum HOM05D003729 ORTHO05D004384 2.0e-29 133.7 159 49.1
C08p32320 Brassica napus HOM05D003729 ORTHO05D004384 3.4e-29 132.9 159 52.2
A09p49920 Brassica napus HOM05D003729 ORTHO05D004384 7.5e-29 131.7 163 52.1
BraA09t40443Z Brassica rapa HOM05D003729 ORTHO05D004384 7.5e-29 131.7 163 52.1
PSO478G2512 Papaver somniferum HOM05D003729 ORTHO05D004384 1.3e-28 131.0 159 48.4
BcaC07g40088 Brassica carinata HOM05D003729 ORTHO05D004384 1.1e-27 127.9 163 49.7
Thhalv10005807m.g Eutrema salsugineum HOM05D003729 ORTHO05D004384 1.4e-27 127.5 164 47.6
BcaC08g44817 Brassica carinata HOM05D003729 ORTHO05D004384 1.8e-27 127.1 158 48.7
BolC6t37563H Brassica oleracea HOM05D003729 ORTHO05D004384 1.8e-27 127.1 158 48.7
HPP92_002023 Vanilla planifolia HOM05D003729 ORTHO05D004384 1.8e-27 127.1 180 46.7
A07p23200 Brassica napus HOM05D003729 ORTHO05D004384 5.4e-27 125.6 157 51.0
BraA07t29984Z Brassica rapa HOM05D003729 ORTHO05D004384 5.4e-27 125.6 157 51.0
CARHR167140 Cardamine hirsuta HOM05D003729 ORTHO05D004384 5.4e-27 125.6 162 46.9
Carub.0005s2373 Capsella rubella HOM05D003729 ORTHO05D004384 9.1e-27 124.8 166 46.4
ATR0757G154 Amborella trichopoda HOM05D003729 ORTHO05D004384 4.5e-26 122.5 162 45.1
Atru.chr1.117 Acer truncatum HOM05D003729 ORTHO05D004384 5.9e-26 122.1 152 50.0
C06p24040 Brassica napus HOM05D003729 ORTHO05D004384 7.7e-26 121.7 157 49.0
unitig_27.g24938 Utricularia gibba HOM05D003729 ORTHO05D004384 5.0e-25 119.0 161 49.7
MSTRG.19814 Avicennia marina HOM05D003729 ORTHO05D004384 1.6e-23 114.0 156 46.8
Zm00001eb378550 Zea mays HOM05D003729 ORTHO05D004384 2.1e-23 113.6 163 45.4
Zm00001eb373800 Zea mays HOM05D003729 ORTHO05D004384 2.8e-23 113.2 163 45.4
SGA_v2.0_scaffold149G36565 Striga asiatica HOM05D003729 ORTHO05D004384 4.7e-23 112.5 162 46.3
vmacro10990 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 8.9e-22 108.2 108 58.3
Migut.N03364 Erythranthe guttata HOM05D003729 ORTHO05D004384 1.5e-21 107.5 161 47.2
SEGI_15849 Sequoiadendron giganteum HOM05D003729 ORTHO05D004384 7.0e-19 98.6 170 43.5
SMO334G0073 Selaginella moellendorffii HOM05D003729 ORTHO05D004384 3.3e-16 89.7 153 41.2
SHI51948 Sapria himalayana HOM05D003729 ORTHO05D004384 1.2e-15 87.8 112 50.0
AagrBONN_evm.TU.Sc2ySwM_228.5647 Anthoceros agrestis HOM05D003729 ORTHO05D004384 1.4e-14 84.3 170 38.2
Oeu059338.2 Olea europaea HOM05D003729 ORTHO05D004384 4.4e-13 79.3 150 38.7
Oeu029504.1 Olea europaea HOM05D003729 ORTHO05D004384 2.4e-11 73.6 86 46.5
SHI50413 Sapria himalayana HOM05D003729 ORTHO05D004384 2.4e-11 73.6 164 40.2
Pp3c18_60 Physcomitrium patens HOM05D003729 ORTHO05D004384 3.2e-11 73.2 198 34.8
CBR_g12410 Chara braunii HOM05D003729 ORTHO05D004384 9.2e-11 71.6 186 35.5
THA.LOC104802556 Tarenaya hassleriana HOM05D004531 ORTHO05D005484 1.2e-10 71.2 94 46.8
Mapoly0009s0077 Marchantia polymorpha HOM05D003729 ORTHO05D004384 2.3e-09 67.0 182 33.0
SHI44104 Sapria himalayana HOM05D003729 ORTHO05D004384 5.6e-08 62.4 117 41.0
Ciclev10027979m.g Citrus clementina HOM05D003729 ORTHO05D004384 2.8e-07 60.1 70 55.7
SHI40171 Sapria himalayana HOM05D003729 ORTHO05D004384 6.2e-07 58.9 88 47.7
Hund18202 Selenicereus undatus HOM05D042687 ORTHO05D004384 6.2e-07 58.9 30 90.0
Hund03377 Selenicereus undatus HOM05D000029 ORTHO05D049649 1.8e-06 57.4 28 92.9
Hund00842 Selenicereus undatus HOM05D008441 ORTHO05D008215 4.0e-06 56.2 39 69.2
Hund30845 Selenicereus undatus HOM05D007896 ORTHO05D008215 8.9e-06 55.1 26 92.3


User provided reference genes

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