Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund24517 Selenicereus undatus HOM05D007624 ORTHO05D037563 3.1e-234 814.7 387 100.0
Hund24518 Selenicereus undatus HOM05D007624 ORTHO05D037563 3.8e-128 462.2 421 58.9
Hund00169 Selenicereus undatus HOM05D007624 ORTHO05D010285 6.9e-93 345.1 391 47.3
Hund24520 Selenicereus undatus HOM05D007624 ORTHO05D037563 2.8e-86 323.2 261 67.4
Hund24522 Selenicereus undatus HOM05D007624 ORTHO05D013505 7.9e-57 225.3 120 91.7
Hund00170 Selenicereus undatus HOM05D007624 ORTHO05D013505 2.0e-47 194.1 156 65.4
AUR62010240 Chenopodium quinoa HOM05D007624 ORTHO05D010285 1.3e-35 154.8 539 25.2
EL10Ac9g21582 Beta vulgaris HOM05D007624 ORTHO05D010285 5.0e-35 152.9 551 26.3
AUR62013223 Chenopodium quinoa HOM05D007624 ORTHO05D010285 4.2e-34 149.8 542 24.9
EL10Ac9g21580 Beta vulgaris HOM05D007624 ORTHO05D010285 3.7e-30 136.7 562 24.6
EL10Ac4g09122 Beta vulgaris HOM05D007624 ORTHO05D010285 3.0e-24 117.1 443 23.9
AUR62004960 Chenopodium quinoa HOM05D007624 ORTHO05D017490 4.0e-24 116.7 430 24.9
AUR62000999 Chenopodium quinoa HOM05D007624 ORTHO05D010285 5.7e-23 112.8 414 26.3
AUR62029830 Chenopodium quinoa HOM05D007624 ORTHO05D010285 9.8e-23 112.1 284 27.8
EL10Ac4g09159 Beta vulgaris HOM05D007624 ORTHO05D017490 1.3e-22 111.7 312 26.6
EL10As7g23759 Beta vulgaris HOM05D007624 ORTHO05D010285 3.7e-22 110.2 330 27.6
EL10Ac8g19127 Beta vulgaris HOM05D007624 ORTHO05D010285 1.8e-21 107.8 383 25.6
EL10Ac9g21583 Beta vulgaris HOM05D007624 ORTHO05D010285 4.5e-20 103.2 283 29.7
AUR62004959 Chenopodium quinoa HOM05D007624 ORTHO05D000152 8.6e-19 99.0 359 25.3
Hund23280 Selenicereus undatus HOM05D007624 ORTHO05D010285 1.5e-18 98.2 332 25.6
EL10As7g23757 Beta vulgaris HOM05D007624 ORTHO05D017490 7.2e-18 95.9 153 35.9
EL10Ac7g18063 Beta vulgaris HOM05D007624 ORTHO05D010285 1.6e-17 94.7 502 25.1
Ah.12g062530 Amaranthus hybridus HOM05D000264 ORTHO05D000152 2.1e-17 94.4 407 25.3
EL10Ac4g09157 Beta vulgaris HOM05D007624 ORTHO05D000152 8.0e-17 92.4 144 36.1
EL10Ac4g09146 Beta vulgaris HOM05D007624 ORTHO05D010285 3.0e-16 90.5 268 26.1
EL10Ac7g18078 Beta vulgaris HOM05D007624 ORTHO05D010285 4.0e-16 90.1 497 21.5
EL10Ac3g06720 Beta vulgaris HOM05D000264 ORTHO05D000152 8.9e-16 89.0 373 25.7
Hund23285 Selenicereus undatus HOM05D007624 ORTHO05D010285 1.2e-15 88.6 148 35.1
EL10Ac4g09124 Beta vulgaris HOM05D007624 ORTHO05D010285 1.5e-15 88.2 348 24.7
EL10Ac8g19125 Beta vulgaris HOM05D007624 ORTHO05D017490 3.7e-14 83.6 352 23.9
AUR62035354 Chenopodium quinoa HOM05D000264 ORTHO05D000152 6.3e-14 82.8 330 25.5
Glyma.06G293900 Glycine max HOM05D000264 ORTHO05D000152 6.3e-14 82.8 331 23.9
AUR62004962 Chenopodium quinoa HOM05D007624 ORTHO05D010285 3.2e-13 80.5 174 31.0
EL10Ac4g09123 Beta vulgaris HOM05D007624 ORTHO05D017490 4.1e-13 80.1 122 36.9
EL10Ac9g22886 Beta vulgaris HOM05D007624 ORTHO05D010285 4.1e-13 80.1 157 34.4
Hund05634 Selenicereus undatus HOM05D007624 ORTHO05D010285 4.1e-13 80.1 141 31.9
Hund05641 Selenicereus undatus HOM05D007624 ORTHO05D010285 4.1e-13 80.1 141 32.6
EL10Ac4g09145 Beta vulgaris HOM05D007624 ORTHO05D017490 5.4e-13 79.7 111 36.9
AUR62036994 Chenopodium quinoa HOM05D007624 ORTHO05D017490 3.5e-12 77.0 233 27.5
Dinv14086 Davidia involucrata HOM05D000096 ORTHO05D000045 3.5e-12 77.0 396 22.7
AUR62017745 Chenopodium quinoa HOM05D007624 ORTHO05D010285 4.5e-12 76.6 159 30.8
EL10Ac3g05160 Beta vulgaris HOM05D007624 ORTHO05D010285 5.9e-12 76.3 159 30.8
EL10Ac9g22577 Beta vulgaris HOM05D007624 ORTHO05D010285 7.8e-12 75.9 132 32.6
AUR62017634 Chenopodium quinoa HOM05D007624 ORTHO05D010285 7.8e-12 75.9 300 22.3
Actinidia04481 Actinidia chinensis HOM05D000264 ORTHO05D000152 1.3e-11 75.1 371 23.2
AUR62034582 Chenopodium quinoa HOM05D007624 ORTHO05D010285 1.3e-11 75.1 263 27.0
Dinv29924 Davidia involucrata HOM05D000264 ORTHO05D000152 1.3e-11 75.1 351 23.6
Dinv29921 Davidia involucrata HOM05D000264 ORTHO05D000152 2.3e-11 74.3 380 24.2
AUR62017633 Chenopodium quinoa HOM05D007624 ORTHO05D000152 2.9e-11 73.9 164 33.5
AUR62036992 Chenopodium quinoa HOM05D007624 ORTHO05D010285 3.9e-11 73.6 148 33.1
Hund05635 Selenicereus undatus HOM05D007624 ORTHO05D010285 3.9e-11 73.6 141 30.5
AUR62035892 Chenopodium quinoa HOM05D000264 ORTHO05D000152 5.0e-11 73.2 153 31.4
Dinv40710 Davidia involucrata HOM05D000264 ORTHO05D000152 5.0e-11 73.2 270 26.3
Sc03g0009030 Simmondsia chinensis HOM05D005485 ORTHO05D007343 5.0e-11 73.2 363 24.2
Lj3C788T7 Lonicera japonica HOM05D000264 ORTHO05D000152 6.6e-11 72.8 303 23.1
AUR62001283 Chenopodium quinoa HOM05D007624 ORTHO05D010285 8.6e-11 72.4 355 24.2
Hund05628 Selenicereus undatus HOM05D007624 ORTHO05D010285 1.1e-10 72.0 140 30.7
vmacro19094 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 1.5e-10 71.6 153 27.5
Lj3A793T36 Lonicera japonica HOM05D000264 ORTHO05D000152 1.9e-10 71.2 273 24.5
Lj3C494G1 Lonicera japonica HOM05D000264 ORTHO05D000152 1.9e-10 71.2 275 24.7
EL10Ac8g19124 Beta vulgaris HOM05D007624 ORTHO05D017490 4.3e-10 70.1 160 28.8
Hma1.2p1_1193F.1_g265581 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 4.3e-10 70.1 389 22.1
EL10Ac4g09143 Beta vulgaris HOM05D007624 ORTHO05D013505 9.5e-10 68.9 148 32.4
EL10Ac7g18064 Beta vulgaris HOM05D007624 ORTHO05D010285 9.5e-10 68.9 323 23.2
AUR62015179 Chenopodium quinoa HOM05D007624 ORTHO05D010285 1.2e-09 68.6 141 29.1
AUR62017632 Chenopodium quinoa HOM05D007624 ORTHO05D010285 1.2e-09 68.6 184 29.9
Duzib177G0874 Durio zibethinus HOM05D000264 ORTHO05D000152 1.2e-09 68.6 140 28.6
TAR624G0511 Trochodendron aralioides HOM05D000264 ORTHO05D000152 1.2e-09 68.6 147 31.3
Gohir.D04G183800 Gossypium hirsutum HOM05D000264 ORTHO05D000152 1.6e-09 68.2 309 24.3
Hund06834 Selenicereus undatus HOM05D007624 ORTHO05D010285 1.6e-09 68.2 334 23.1
AUR62036995 Chenopodium quinoa HOM05D007624 ORTHO05D013505 2.1e-09 67.8 217 25.8
Gorai.012G178600 Gossypium raimondii HOM05D000264 ORTHO05D000152 2.1e-09 67.8 300 24.3
Rhsim04G0028400 Rhododendron simsii HOM05D000264 ORTHO05D013505 2.8e-09 67.4 108 39.8
Rhsim07G0250900 Rhododendron simsii HOM05D000264 ORTHO05D000152 2.8e-09 67.4 108 39.8
TAR624G1302 Trochodendron aralioides HOM05D000264 ORTHO05D000152 2.8e-09 67.4 269 24.9
Carub.0003s0376 Capsella rubella HOM05D000264 ORTHO05D000152 3.6e-09 67.0 205 27.8
Gohir.D04G184300 Gossypium hirsutum HOM05D000264 ORTHO05D000152 3.6e-09 67.0 300 24.0
Rhsim04G0029100 Rhododendron simsii HOM05D000264 ORTHO05D000152 3.6e-09 67.0 103 37.9
RhsimUnG0050700 Rhododendron simsii HOM05D000264 ORTHO05D000152 3.6e-09 67.0 108 42.6
Duzib102G0001 Durio zibethinus HOM05D000264 ORTHO05D000152 4.7e-09 66.6 294 24.1
EL10Ac2g02864 Beta vulgaris HOM05D007624 ORTHO05D010285 6.1e-09 66.2 169 26.6
Actinidia11042 Actinidia chinensis HOM05D000264 ORTHO05D000152 8.0e-09 65.9 279 24.7
AUR62001268 Chenopodium quinoa HOM05D007624 ORTHO05D010285 8.0e-09 65.9 247 26.7
Duzib035G0001 Durio zibethinus HOM05D000264 ORTHO05D000152 8.0e-09 65.9 294 24.1
Rhsim04G0029200 Rhododendron simsii HOM05D000264 ORTHO05D000152 8.0e-09 65.9 101 38.6
TAR627G0592 Trochodendron aralioides HOM05D000264 ORTHO05D000152 8.0e-09 65.9 97 37.1
TAR628G0075 Trochodendron aralioides HOM05D000264 ORTHO05D000152 8.0e-09 65.9 157 26.8
EL10Ac7g18082 Beta vulgaris HOM05D007624 ORTHO05D010285 1.0e-08 65.5 143 29.4
EL10Ac8g19123 Beta vulgaris HOM05D007624 ORTHO05D013505 1.4e-08 65.1 141 31.2
Gorai.012G179400 Gossypium raimondii HOM05D000264 ORTHO05D000152 1.8e-08 64.7 222 26.6
Hma1.2p1_1276F.1_g272230 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 1.8e-08 64.7 390 22.3
CANSAT78G0315 Cannabis sativa HOM05D000264 ORTHO05D000152 2.3e-08 64.3 230 22.6
COL.COLO4_14688 Corchorus olitorius HOM05D000264 ORTHO05D000152 2.3e-08 64.3 283 26.5
PSO732G0699 Papaver somniferum HOM05D000264 ORTHO05D000152 2.3e-08 64.3 171 29.8
RhsimUnG0050600 Rhododendron simsii HOM05D000264 ORTHO05D000152 2.3e-08 64.3 106 41.5
arahy.Tifrunner.gnm1.ann1.SP93FZ Arachis hypogaea HOM05D000264 ORTHO05D000152 3.1e-08 63.9 267 24.7
Atru.chr2.3228 Acer truncatum HOM05D000264 ORTHO05D000152 4.0e-08 63.5 143 29.4
Atru.chr4.2238_Atru.chr4.2239 Acer truncatum HOM05D000264 ORTHO05D000152 4.0e-08 63.5 164 31.7
MBI02_g18415_MAGBIO Magnolia biondii HOM05D000264 ORTHO05D000152 4.0e-08 63.5 366 22.7
RhsimUnG0230400 Rhododendron simsii HOM05D000264 ORTHO05D013505 4.0e-08 63.5 109 35.8
HanXRQChr06g0174641 Helianthus annuus HOM05D000264 ORTHO05D000152 6.8e-08 62.8 141 31.9
EL10Ac7g18079 Beta vulgaris HOM05D007624 ORTHO05D010285 8.9e-08 62.4 145 30.3
EL10Ac2g04708 Beta vulgaris HOM05D007624 ORTHO05D010285 1.2e-07 62.0 152 32.9
A09p02780 Brassica napus HOM05D000264 ORTHO05D000152 1.2e-07 62.0 285 23.5
CANSAT64G1402 Cannabis sativa HOM05D000264 ORTHO05D000152 1.2e-07 62.0 312 25.3
Gohir.D04G184575 Gossypium hirsutum HOM05D000264 ORTHO05D000152 1.5e-07 61.6 225 26.7
RcHm_v2.0_Chr5g0041111 Rosa chinensis HOM05D000264 ORTHO05D000152 1.5e-07 61.6 144 28.5
Actinidia04484 Actinidia chinensis HOM05D000264 ORTHO05D000152 2.0e-07 61.2 386 22.3
Ciclev10004701m.g Citrus clementina HOM05D000264 ORTHO05D000152 2.0e-07 61.2 281 23.5
Dinv44626 Davidia involucrata HOM05D000264 ORTHO05D000152 2.0e-07 61.2 339 24.2
FAN18G1722 Fragaria x ananassa HOM05D000264 ORTHO05D000152 2.0e-07 61.2 144 27.8
Glyma.09G054200 Glycine max HOM05D000097 ORTHO05D000041 2.0e-07 61.2 335 22.4
Lj4A628G55 Lonicera japonica HOM05D000264 ORTHO05D000152 2.0e-07 61.2 279 27.2
arahy.Tifrunner.gnm1.ann1.Z3XU5G Arachis hypogaea HOM05D000264 ORTHO05D000152 2.6e-07 60.8 110 34.5
AUR62014935 Chenopodium quinoa HOM05D007624 ORTHO05D010285 3.4e-07 60.5 184 24.5
Eucgr.D01254 Eucalyptus grandis HOM05D000264 ORTHO05D000152 3.4e-07 60.5 282 26.6
Sc19g0005680 Simmondsia chinensis HOM05D000264 ORTHO05D000152 3.4e-07 60.5 106 29.2
Eucgr.K00476 Eucalyptus grandis HOM05D000264 ORTHO05D000152 4.4e-07 60.1 255 21.2
Nn1g06590 Nelumbo nucifera HOM05D000264 ORTHO05D000152 5.8e-07 59.7 276 25.4
EL10Ac2g04709 Beta vulgaris HOM05D007624 ORTHO05D010285 7.5e-07 59.3 172 28.5
AUR62043845 Chenopodium quinoa HOM05D000448 ORTHO05D000291 9.8e-07 58.9 200 26.5
Prupe.3G155300 Prunus persica HOM05D000264 ORTHO05D000152 9.8e-07 58.9 147 25.2
Sed0020174 Sechium edule HOM05D000264 ORTHO05D000152 9.8e-07 58.9 144 27.1
Ah.08g218060 Amaranthus hybridus HOM05D007624 ORTHO05D010285 1.3e-06 58.5 177 26.6
Prupe.4G202700 Prunus persica HOM05D000264 ORTHO05D000152 1.3e-06 58.5 142 26.1
TWI36G0192 Tripterygium wilfordii HOM05D000264 ORTHO05D000152 1.3e-06 58.5 148 26.4
Actinidia11041 Actinidia chinensis HOM05D000264 ORTHO05D000152 1.7e-06 58.2 306 21.9
Ciclev10004657m.g Citrus clementina HOM05D000264 ORTHO05D000152 1.7e-06 58.2 145 30.3
PSO063G7633 Papaver somniferum HOM05D000264 ORTHO05D000152 1.7e-06 58.2 147 29.3
Prupe.3G154200 Prunus persica HOM05D000264 ORTHO05D000152 1.7e-06 58.2 101 32.7
Prupe.3G154700 Prunus persica HOM05D000264 ORTHO05D000152 1.7e-06 58.2 101 32.7
Sc03g0008990 Simmondsia chinensis HOM05D005485 ORTHO05D007343 1.7e-06 58.2 370 23.0
TAR521G0003 Trochodendron aralioides HOM05D000264 ORTHO05D000152 1.7e-06 58.2 92 34.8
CAN.G694.73 Capsicum annuum HOM05D000264 ORTHO05D000152 2.2e-06 57.8 134 31.3
Eucgr.F00819 Eucalyptus grandis HOM05D000264 ORTHO05D000152 2.2e-06 57.8 126 30.2
Eucgr.F00991 Eucalyptus grandis HOM05D000264 ORTHO05D000152 2.2e-06 57.8 127 29.9
Rhsim04G0034200 Rhododendron simsii HOM05D000264 ORTHO05D000152 2.2e-06 57.8 106 37.7
arahy.Tifrunner.gnm1.ann1.AMU9JT Arachis hypogaea HOM05D000264 ORTHO05D000152 2.9e-06 57.4 136 32.4
BcaB04g19313 Brassica carinata HOM05D000264 ORTHO05D000152 2.9e-06 57.4 65 43.1
Prupe.3G154000 Prunus persica HOM05D000264 ORTHO05D000152 3.7e-06 57.0 101 31.7
Rhsim04G0191900 Rhododendron simsii HOM05D000264 ORTHO05D000152 3.7e-06 57.0 59 40.7
AUR62010241 Chenopodium quinoa HOM05D007624 ORTHO05D010285 4.9e-06 56.6 113 33.6
Lj3A489T26 Lonicera japonica HOM05D000264 ORTHO05D000152 4.9e-06 56.6 275 22.2
Rhsim04G0028800 Rhododendron simsii HOM05D000264 ORTHO05D013505 4.9e-06 56.6 101 33.7
Cpa.g.sc34.146 Carica papaya HOM05D000264 ORTHO05D000152 8.3e-06 55.8 47 42.6
RhsimUnG0230500 Rhododendron simsii HOM05D000264 ORTHO05D000152 8.3e-06 55.8 112 37.5


User provided reference genes

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