Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund24433 Selenicereus undatus HOM05D006083 ORTHO05D007634 0.0e+00 1782.3 910 100.0
Hund12547 Selenicereus undatus HOM05D006083 ORTHO05D007634 0.0e+00 1185.2 789 81.5
AUR62038373 Chenopodium quinoa HOM05D006083 ORTHO05D007634 5.3e-128 463.0 782 42.7
AUR62040954 Chenopodium quinoa HOM05D006083 ORTHO05D007634 2.5e-125 454.1 782 42.2
EL10Ac2g03425 Beta vulgaris HOM05D006083 ORTHO05D007634 5.7e-122 443.0 794 41.9
Dinv31433 Davidia involucrata HOM05D006083 ORTHO05D007634 3.8e-86 323.9 819 35.5
TAR623G0128 Trochodendron aralioides HOM05D006083 ORTHO05D007634 1.1e-77 295.8 765 34.1
Cfa001507 Carpinus fangiana HOM05D006083 ORTHO05D007634 6.8e-75 286.6 824 31.3
Haze_17036 Corylus avellana HOM05D006083 ORTHO05D007634 2.4e-72 278.1 786 31.6
QL08p059019 Quercus lobata HOM05D006083 ORTHO05D007634 6.0e-71 273.5 787 32.9
Actinidia02966 Actinidia chinensis HOM05D006083 ORTHO05D007634 1.3e-70 272.3 786 32.4
TAR369G0795 Trochodendron aralioides HOM05D006083 ORTHO05D007634 9.5e-69 266.2 823 31.2
MD07G1193600 Malus domestica HOM05D006083 ORTHO05D007634 1.4e-67 262.3 800 31.2
Thecc.10G046700 Theobroma cacao HOM05D006083 ORTHO05D007634 1.7e-65 255.4 778 32.3
CSS0008531 Camellia sinensis var. sinensis HOM05D006083 ORTHO05D007634 1.1e-64 252.7 708 31.6
Nn2g12936 Nelumbo nucifera HOM05D006083 ORTHO05D007634 2.1e-63 248.4 754 33.0
Manes.07G113300 Manihot esculenta HOM05D006083 ORTHO05D007634 3.5e-63 247.7 815 30.9
Prupe.2G231200 Prunus persica HOM05D006083 ORTHO05D007634 6.0e-63 246.9 780 30.8
Gohir.A05G349900 Gossypium hirsutum HOM05D006083 ORTHO05D007634 1.7e-62 245.4 775 32.9
Potri.008G052500 Populus trichocarpa HOM05D006083 ORTHO05D007634 3.0e-62 244.6 812 32.5
Rhsim03G0132700 Rhododendron simsii HOM05D006083 ORTHO05D007634 3.0e-62 244.6 739 31.1
Gorai.012G069900 Gossypium raimondii HOM05D006083 ORTHO05D007634 3.9e-62 244.2 772 32.9
TWI15G0674 Tripterygium wilfordii HOM05D006083 ORTHO05D007634 1.5e-61 242.3 773 31.0
Gohir.D04G062600 Gossypium hirsutum HOM05D006083 ORTHO05D007634 1.2e-60 239.2 772 32.6
CiPaw.01G284100 Carya illinoinensis HOM05D006083 ORTHO05D007634 1.4e-59 235.7 815 30.3
CANSAT56G1432 Cannabis sativa HOM05D006083 ORTHO05D007634 4.9e-57 227.3 825 29.8
COL.COLO4_14970 Corchorus olitorius HOM05D006083 ORTHO05D007634 4.9e-57 227.3 790 31.9
Sabra08G0037800 Salix brachista HOM05D006083 ORTHO05D007634 4.6e-55 220.7 810 31.5
vmacro07157 Vaccinium macrocarpon HOM05D006083 ORTHO05D007634 8.6e-54 216.5 769 29.1
GSVIVG01016589001 Vitis vinifera HOM05D006083 ORTHO05D007634 1.9e-53 215.3 774 30.5
RcHm_v2.0_Chr1g0366201 Rosa chinensis HOM05D006083 ORTHO05D007634 2.1e-52 211.8 801 29.2
FAN06G5109 Fragaria x ananassa HOM05D006083 ORTHO05D007634 6.2e-52 210.3 775 29.2
Potri.010G208200 Populus trichocarpa HOM05D006083 ORTHO05D007634 1.1e-51 209.5 797 30.6
FvH4_7g21930 Fragaria vesca HOM05D006083 ORTHO05D007634 1.8e-51 208.8 777 28.8
FAN06G0387 Fragaria x ananassa HOM05D006083 ORTHO05D007634 1.8e-51 208.8 775 29.0
FAN01G1089 Fragaria x ananassa HOM05D006083 ORTHO05D007634 3.1e-51 208.0 781 29.2
FAN03G2083 Fragaria x ananassa HOM05D006083 ORTHO05D007634 4.0e-51 207.6 773 29.5
Sc06g0002680 Simmondsia chinensis HOM05D006083 ORTHO05D007634 4.0e-51 207.6 295 49.2
FAN10G0925 Fragaria x ananassa HOM05D006083 ORTHO05D007634 1.1e-48 199.5 772 28.9
MBI14_g18543_MAGBIO Magnolia biondii HOM05D006083 ORTHO05D007634 2.7e-47 194.9 779 29.7
Duzib114G0803 Durio zibethinus HOM05D006083 ORTHO05D007634 2.1e-44 185.3 400 37.0
PSO384G3245 Papaver somniferum HOM05D006083 ORTHO05D007634 4.0e-43 181.0 756 28.7
Lj8C87G2 Lonicera japonica HOM05D006356 ORTHO05D007903 2.0e-42 178.7 751 29.2
Atru.chr12.505 Acer truncatum HOM05D006083 ORTHO05D007634 5.8e-42 177.2 660 29.7
PSO339G3664 Papaver somniferum HOM05D006083 ORTHO05D007634 5.8e-42 177.2 782 27.2
Glyma.18G288300 Glycine max HOM05D006083 ORTHO05D007634 2.9e-41 174.9 765 30.1
Aqoxy4G02985 Aquilegia oxysepala HOM05D006083 ORTHO05D007634 6.4e-41 173.7 807 29.0
Sc06g0002670 Simmondsia chinensis HOM05D006083 ORTHO05D007634 1.9e-37 162.2 466 32.2
THA.LOC104810174 Tarenaya hassleriana HOM05D006083 ORTHO05D007634 5.6e-37 160.6 731 29.7
Psat3g185080 Pisum sativum HOM05D006083 ORTHO05D007634 3.1e-35 154.8 758 28.0
Solyc04g011380.4 Solanum lycopersicum HOM05D006083 ORTHO05D007634 2.0e-34 152.1 746 26.0
arahy.Tifrunner.gnm1.ann1.ES2X5Y Arachis hypogaea HOM05D006083 ORTHO05D007634 2.6e-34 151.8 777 27.3
arahy.Tifrunner.gnm1.ann1.V7LDKI Arachis hypogaea HOM05D006083 ORTHO05D007634 2.6e-34 151.8 777 27.3
Lj1g0008101 Lotus japonicus HOM05D006083 ORTHO05D007634 4.5e-34 151.0 767 28.4
ClCG09G020050 Citrullus lanatus HOM05D006083 ORTHO05D007634 9.9e-34 149.8 807 27.9
Cpa.g.sc1.375 Carica papaya HOM05D006083 ORTHO05D007634 2.2e-33 148.7 387 34.4
Sopen04g005570 Solanum pennellii HOM05D006083 ORTHO05D007634 2.9e-33 148.3 746 25.7
VMungo1383G1537 Vigna mungo HOM05D006083 ORTHO05D007634 8.4e-33 146.7 762 28.6
Ca_07227_v3 Cicer arietinum L. HOM05D006083 ORTHO05D007634 4.2e-32 144.4 707 27.4
CAN.G786.23 Capsicum annuum HOM05D006083 ORTHO05D007634 6.0e-31 140.6 750 26.3
CsaV3_5G026410 Cucumis sativus L. HOM05D006083 ORTHO05D007634 7.9e-31 140.2 753 26.4
Ciclev10030497m.g Citrus clementina HOM05D006083 ORTHO05D007634 6.7e-30 137.1 749 25.9
PGR142G3850 Punica granatum HOM05D006083 ORTHO05D007634 1.9e-29 135.6 727 25.6
Lj1A934T60 Lonicera japonica HOM05D006083 ORTHO05D007634 4.3e-29 134.4 315 33.3
Nitab4.5_0003969g0020 Nicotiana tabacum HOM05D006083 ORTHO05D007634 5.6e-29 134.0 739 27.3
MELO3C025449.2 Cucumis melo HOM05D006083 ORTHO05D007634 2.8e-28 131.7 796 26.0
Lalb_Chr10g0091771 Lupinus albus HOM05D006083 ORTHO05D007634 4.8e-28 131.0 287 38.0
Sed0020975 Sechium edule HOM05D006083 ORTHO05D007634 1.8e-27 129.0 755 26.2
Nitab4.5_0005525g0010 Nicotiana tabacum HOM05D006083 ORTHO05D007634 2.4e-27 128.6 741 26.9
Peaxi162Scf00060g00026 Petunia axillaris HOM05D006083 ORTHO05D007634 2.4e-27 128.6 303 34.7
TPR.G15506 Trifolium pratense HOM05D006083 ORTHO05D007634 2.4e-27 128.6 315 34.6
DCAR_027665 Daucus carota HOM05D006083 ORTHO05D007634 1.5e-26 125.9 604 28.6
Lalb_Chr04g0257841 Lupinus albus HOM05D006083 ORTHO05D007634 2.6e-26 125.2 286 35.3
Eucgr.G02918 Eucalyptus grandis HOM05D006083 ORTHO05D007634 4.5e-26 124.4 592 28.4
Phvul.008G013666 Phaseolus vulgaris HOM05D006083 ORTHO05D007634 4.5e-26 124.4 638 29.3
Medtr7g024000 Medicago truncatula HOM05D006083 ORTHO05D007634 1.0e-25 123.2 762 27.7
SHI22592 Sapria himalayana HOM05D006083 ORTHO05D007634 5.5e-24 117.5 780 25.6
AL4G36990 Arabidopsis lyrata HOM05D006083 ORTHO05D007634 4.6e-23 114.4 735 26.1
Cc02_g08180 Coffea canephora HOM05D006083 ORTHO05D007634 4.6e-23 114.4 786 25.1
Sp4g21870 Schrenkiella parvula HOM05D006083 ORTHO05D007634 4.6e-23 114.4 744 26.2
Thhalv10016135m.g Eutrema salsugineum HOM05D006083 ORTHO05D007634 7.9e-23 113.6 718 26.6
Oeu040905.3 Olea europaea HOM05D006083 ORTHO05D007634 8.7e-22 110.2 107 54.2
BcaB06g29099 Brassica carinata HOM05D006083 ORTHO05D007634 5.7e-21 107.5 288 34.4
BraA04t18470Z Brassica rapa HOM05D006083 ORTHO05D007634 9.7e-21 106.7 287 33.1
HanXRQChr09g0247731 Helianthus annuus HOM05D006083 ORTHO05D007634 9.7e-21 106.7 734 25.1
Lsat_1_v5_gn_9_65161 Lactuca sativa HOM05D006083 ORTHO05D007634 2.8e-20 105.1 531 26.0
C04p67440 Brassica napus HOM05D006083 ORTHO05D007634 3.7e-20 104.8 304 33.6
BolC4t28242H Brassica oleracea HOM05D006083 ORTHO05D007634 3.7e-20 104.8 304 33.6
Carub.0004s2165 Capsella rubella HOM05D006083 ORTHO05D007634 3.7e-20 104.8 751 25.0
CARHR134450 Cardamine hirsuta HOM05D006083 ORTHO05D007634 1.4e-19 102.8 730 26.0
Aa31LG5G20040 Aethionema arabicum HOM05D006083 ORTHO05D007634 3.1e-19 101.7 719 26.1
A04p30380 Brassica napus HOM05D006083 ORTHO05D007634 9.0e-19 100.1 287 32.8
AT2G39580 Arabidopsis thaliana HOM05D006083 ORTHO05D007634 2.0e-18 99.0 720 27.4
HPP92_018997 Vanilla planifolia HOM05D006083 ORTHO05D007634 2.9e-17 95.1 283 32.5
ATR0559G184 Amborella trichopoda HOM05D006083 ORTHO05D007634 7.2e-16 90.5 720 24.3
CDE05G2458 Ceratophyllum demersum HOM05D006083 ORTHO05D007634 1.4e-14 86.3 231 34.2
Lsat_1_v5_gn_7_4020 Lactuca sativa HOM05D006083 ORTHO05D007634 5.7e-13 80.9 77 54.5
Zm00001eb028750 Zea mays HOM05D006083 ORTHO05D007634 1.7e-12 79.3 280 30.4
Lalb_Chr10g0091761 Lupinus albus HOM05D006083 ORTHO05D007634 2.8e-12 78.6 226 32.7
Lalb_Chr04g0257831 Lupinus albus HOM05D006083 ORTHO05D007634 1.1e-11 76.6 257 31.1
Cpa.g.sc1.376 Carica papaya HOM05D006083 ORTHO05D007634 1.0e-09 70.1 372 24.7
RcHm_v2.0_Chr3g0492191 Rosa chinensis HOM05D006083 ORTHO05D007634 9.4e-08 63.5 145 35.2
Oeu023787.1 Olea europaea HOM05D006083 ORTHO05D007634 1.2e-07 63.2 235 29.8


User provided reference genes

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