Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund24401 Selenicereus undatus HOM05D006138 ORTHO05D007778 5.8e-150 534.3 280 100.0
AUR62018570 Chenopodium quinoa HOM05D006138 ORTHO05D007778 1.3e-61 240.7 252 55.2
EL10Ac3g07466 Beta vulgaris HOM05D006138 ORTHO05D007778 8.5e-61 238.0 267 52.1
AUR62020846 Chenopodium quinoa HOM05D006138 ORTHO05D007778 5.2e-58 228.8 252 52.4
Dinv27208 Davidia involucrata HOM05D006138 ORTHO05D007778 1.1e-52 211.1 255 49.0
GSVIVG01020999001 Vitis vinifera HOM05D006138 ORTHO05D007778 1.1e-52 211.1 253 48.6
TAR362G0162 Trochodendron aralioides HOM05D006138 ORTHO05D007778 5.5e-52 208.8 255 47.1
Sc13g0000300 Simmondsia chinensis HOM05D006138 ORTHO05D007778 1.6e-51 207.2 254 46.1
Thecc.04G198400 Theobroma cacao HOM05D006138 ORTHO05D007778 3.2e-47 193.0 257 45.1
Nn1g07955 Nelumbo nucifera HOM05D006138 ORTHO05D007778 5.4e-47 192.2 261 43.7
Rhsim02G0060900 Rhododendron simsii HOM05D006138 ORTHO05D007778 5.4e-47 192.2 256 44.9
Ah.04g149320 Amaranthus hybridus HOM05D006138 ORTHO05D007778 1.2e-46 191.0 264 45.1
Actinidia38756 Actinidia chinensis HOM05D006138 ORTHO05D007778 2.0e-46 190.3 254 45.3
Cpa.g.sc83.29 Carica papaya HOM05D006138 ORTHO05D007778 2.3e-45 186.8 255 42.4
Cfa014952 Carpinus fangiana HOM05D006138 ORTHO05D007778 2.3e-45 186.8 261 44.8
RhsimUnG0035600 Rhododendron simsii HOM05D006138 ORTHO05D007778 2.3e-45 186.8 256 44.1
Gohir.A05G323100 Gossypium hirsutum HOM05D006138 ORTHO05D007778 5.0e-45 185.7 256 46.1
Gorai.009G350500 Gossypium raimondii HOM05D006138 ORTHO05D007778 5.0e-45 185.7 256 45.3
Gohir.D05G326000 Gossypium hirsutum HOM05D006138 ORTHO05D007778 6.6e-45 185.3 256 45.3
Hma1.2p1_0017F.1_g011170 Hydrangea macrophylla HOM05D006138 ORTHO05D007778 1.9e-44 183.7 244 45.1
Atru.chr4.1604 Acer truncatum HOM05D006138 ORTHO05D007778 9.5e-44 181.4 261 44.1
CiPaw.02G065100 Carya illinoinensis HOM05D006138 ORTHO05D007778 1.6e-43 180.6 259 44.8
Gohir.A12G078622 Gossypium hirsutum HOM05D006138 ORTHO05D007778 2.8e-43 179.9 256 44.5
COL.COLO4_20197 Corchorus olitorius HOM05D006138 ORTHO05D007778 3.4e-41 172.9 257 43.2
vmacro15557 Vaccinium macrocarpon HOM05D006138 ORTHO05D007778 1.7e-40 170.6 258 40.7
Oeu025031.1 Olea europaea HOM05D006138 ORTHO05D007778 2.2e-40 170.2 251 39.8
TWI09G0334 Tripterygium wilfordii HOM05D006138 ORTHO05D007778 2.9e-40 169.9 255 41.2
Manes.15G055900 Manihot esculenta HOM05D006138 ORTHO05D007778 2.4e-39 166.8 209 45.5
Carub.0003s2421 Capsella rubella HOM05D006138 ORTHO05D007778 1.6e-38 164.1 253 39.5
Gohir.D12G210200 Gossypium hirsutum HOM05D006138 ORTHO05D007778 6.0e-38 162.2 229 45.4
Migut.G00745 Erythranthe guttata HOM05D006138 ORTHO05D007778 1.0e-37 161.4 252 41.7
Cc03_g08330 Coffea canephora HOM05D006138 ORTHO05D007778 1.3e-37 161.0 261 38.7
TWI53G0419 Tripterygium wilfordii HOM05D006138 ORTHO05D007778 1.3e-37 161.0 258 39.5
AL3G38900 Arabidopsis lyrata HOM05D006138 ORTHO05D007778 1.7e-37 160.6 252 39.3
Lsat_1_v5_gn_6_60661 Lactuca sativa HOM05D006138 ORTHO05D007778 1.7e-37 160.6 253 39.1
QL10p052654 Quercus lobata HOM05D006138 ORTHO05D007778 3.0e-37 159.8 257 42.4
Lj6A392G25 Lonicera japonica HOM05D006138 ORTHO05D007778 1.5e-36 157.5 293 35.5
Prupe.1G161100 Prunus persica HOM05D006138 ORTHO05D007778 1.9e-36 157.1 267 37.8
Sed0019269 Sechium edule HOM05D006138 ORTHO05D007778 3.3e-36 156.4 258 40.3
DCAR_026640 Daucus carota HOM05D006138 ORTHO05D007778 4.3e-36 156.0 254 38.6
AT3G23910 Arabidopsis thaliana HOM05D006138 ORTHO05D007778 1.2e-35 154.5 254 37.8
PSO063G4547 Papaver somniferum HOM05D006138 ORTHO05D007778 1.6e-35 154.1 259 37.8
Potri.001G317900 Populus trichocarpa HOM05D006138 ORTHO05D007778 4.7e-35 152.5 257 40.5
Sp3g21610 Schrenkiella parvula HOM05D006138 ORTHO05D007778 4.7e-35 152.5 254 38.6
MELO3C006299.2 Cucumis melo HOM05D006138 ORTHO05D007778 6.2e-35 152.1 260 40.4
Eucgr.H00039 Eucalyptus grandis HOM05D006138 ORTHO05D007778 1.4e-34 151.0 255 38.4
CsaV3_3G010820 Cucumis sativus L. HOM05D006138 ORTHO05D007778 2.3e-34 150.2 256 40.2
THA.LOC104804805 Tarenaya hassleriana HOM05D006138 ORTHO05D007778 4.0e-34 149.4 253 38.7
HanXRQChr07g0185891 Helianthus annuus HOM05D006138 ORTHO05D007778 3.4e-33 146.4 250 36.0
MD04G1014100 Malus domestica HOM05D006138 ORTHO05D007778 4.4e-33 146.0 254 36.6
Sabra16G0201200 Salix brachista HOM05D006138 ORTHO05D007778 4.4e-33 146.0 264 38.3
SGA_v2.0_scaffold19G08768 Striga asiatica HOM05D006138 ORTHO05D007778 3.7e-32 142.9 255 36.1
Haze_11642 Corylus avellana HOM05D006138 ORTHO05D007778 6.4e-32 142.1 257 39.3
PSO017G1394 Papaver somniferum HOM05D006138 ORTHO05D007778 6.4e-32 142.1 260 37.3
Nitab4.5_0000401g0220 Nicotiana tabacum HOM05D006138 ORTHO05D007778 1.4e-31 141.0 253 37.2
SalBow8G0822 Salvia bowleyana HOM05D006138 ORTHO05D007778 1.4e-31 141.0 285 37.2
SalBow8G2056 Salvia bowleyana HOM05D006138 ORTHO05D007778 1.4e-31 141.0 285 37.2
AT3G24255 Arabidopsis thaliana HOM05D006138 ORTHO05D007778 2.4e-31 140.2 261 36.0
PGR004G2157 Punica granatum HOM05D006138 ORTHO05D007778 1.2e-30 137.9 252 35.7
Lj6A407G21 Lonicera japonica HOM05D006138 ORTHO05D007778 1.6e-30 137.5 293 33.4
MSTRG.9735 Avicennia marina HOM05D006138 ORTHO05D007778 2.1e-30 137.1 252 38.1
Aa31LG8G10490 Aethionema arabicum HOM05D006138 ORTHO05D007778 2.7e-30 136.7 261 36.8
BcaC06g35587 Brassica carinata HOM05D006138 ORTHO05D007778 3.5e-30 136.3 257 36.6
CANSAT78G1344 Cannabis sativa HOM05D006138 ORTHO05D007778 1.0e-29 134.8 253 36.8
C07p13230 Brassica napus HOM05D006138 ORTHO05D007778 2.3e-29 133.7 254 36.6
RcHm_v2.0_Chr4g0414021 Rosa chinensis HOM05D006138 ORTHO05D007778 2.3e-29 133.7 256 35.9
CANSAT78G2425 Cannabis sativa HOM05D006138 ORTHO05D007778 3.0e-29 133.3 253 36.4
BcaB06g26554 Brassica carinata HOM05D006138 ORTHO05D007778 3.9e-29 132.9 254 36.2
vmacro15559 Vaccinium macrocarpon HOM05D006138 ORTHO05D007778 8.6e-29 131.7 255 36.5
CAN.G1565.12 Capsicum annuum HOM05D006138 ORTHO05D007778 1.1e-28 131.3 212 41.0
Solyc09g092180.3 Solanum lycopersicum HOM05D006138 ORTHO05D007778 1.1e-28 131.3 263 36.9
A07p08490 Brassica napus HOM05D006138 ORTHO05D007778 1.5e-28 131.0 254 35.0
ClCG05G003180 Citrullus lanatus HOM05D006138 ORTHO05D007778 1.9e-28 130.6 253 35.6
Sopen09g035050 Solanum pennellii HOM05D006138 ORTHO05D007778 1.9e-28 130.6 263 37.3
PGSC0003DMG400026422 Solanum tuberosum HOM05D006138 ORTHO05D007778 1.9e-28 130.6 215 40.0
Peaxi162Scf00047g00230 Petunia axillaris HOM05D006138 ORTHO05D007778 2.5e-28 130.2 256 34.8
Nitab4.5_0003101g0010 Nicotiana tabacum HOM05D006138 ORTHO05D007778 1.6e-27 127.5 256 36.3
Aqoxy2G04005 Aquilegia oxysepala HOM05D006138 ORTHO05D007778 2.1e-27 127.1 259 36.7
arahy.Tifrunner.gnm1.ann1.HYZ2KB Arachis hypogaea HOM05D006138 ORTHO05D007778 2.1e-27 127.1 251 33.9
BolC7t41815H Brassica oleracea HOM05D006138 ORTHO05D007778 2.8e-27 126.7 264 35.2
Aqoxy360s001 Aquilegia oxysepala HOM05D006138 ORTHO05D007778 3.6e-27 126.3 205 37.6
BraA07t28634Z Brassica rapa HOM05D006138 ORTHO05D007778 6.2e-27 125.6 264 34.1
Ca_16395_v3 Cicer arietinum L. HOM05D006138 ORTHO05D007778 6.2e-27 125.6 250 33.6
arahy.Tifrunner.gnm1.ann1.3M33GA Arachis hypogaea HOM05D006138 ORTHO05D007778 8.1e-27 125.2 251 33.9
VMungo1383G1063 Vigna mungo HOM05D000127 ORTHO05D000243 4.0e-26 122.9 215 38.1
ECA233G3278 Erigeron canadensis HOM05D006138 ORTHO05D007778 5.2e-26 122.5 251 31.1
Eucgr.L02926 Eucalyptus grandis HOM05D006138 ORTHO05D007778 6.8e-26 122.1 252 34.5
FAN12G1205 Fragaria x ananassa HOM05D006138 ORTHO05D007778 6.8e-26 122.1 256 32.8
Thhalv10002763m.g Eutrema salsugineum HOM05D006138 ORTHO05D007778 1.2e-25 121.3 188 37.8
FvH4_4g13460 Fragaria vesca HOM05D006138 ORTHO05D007778 1.5e-25 120.9 256 32.4
FAN22G1553 Fragaria x ananassa HOM05D006138 ORTHO05D007778 9.9e-25 118.2 259 33.6
Lj6g0009885 Lotus japonicus HOM05D006138 ORTHO05D007778 9.9e-25 118.2 256 31.6
Psat5g102360 Pisum sativum HOM05D006138 ORTHO05D007778 4.9e-24 115.9 248 31.9
CDE05G2116 Ceratophyllum demersum HOM05D006138 ORTHO05D007778 3.9e-21 106.3 197 35.0
Phvul.001G267400 Phaseolus vulgaris HOM05D006138 ORTHO05D007778 1.5e-20 104.4 253 31.2
CSS0014339 Camellia sinensis var. sinensis HOM05D006138 ORTHO05D007778 1.2e-19 101.3 99 55.6
CSS0015025 Camellia sinensis var. sinensis HOM05D006138 ORTHO05D007778 1.2e-19 101.3 99 55.6
HPP92_023190 Vanilla planifolia HOM05D006138 ORTHO05D007778 2.1e-19 100.5 257 30.4
Nn1g00061 Nelumbo nucifera HOM05D006138 ORTHO05D007778 6.2e-19 99.0 148 38.5
Nitab4.5_0001652g0120 Nicotiana tabacum HOM05D006138 ORTHO05D007778 5.2e-18 95.9 213 34.3
Glyma.11G255500 Glycine max HOM05D006138 ORTHO05D007778 5.8e-17 92.4 252 29.0
Lalb_Chr23g0278421 Lupinus albus HOM05D006138 ORTHO05D007778 1.2e-14 84.7 188 31.4
unitig_37.g12032 Utricularia gibba HOM05D006138 ORTHO05D007778 6.0e-14 82.4 232 31.0
Duzib268G0147 Durio zibethinus HOM05D006138 ORTHO05D007778 1.3e-13 81.3 130 43.1
Duzib268G0476 Durio zibethinus HOM05D006138 ORTHO05D007778 1.3e-13 81.3 130 43.1
RcHm_v2.0_Chr4g0414071 Rosa chinensis HOM05D006138 ORTHO05D007778 2.1e-11 73.9 104 44.2
Os04g0379800 Oryza sativa ssp. japonica HOM05D006138 ORTHO05D007778 8.1e-11 72.0 256 24.2
FAN07G2199 Fragaria x ananassa HOM05D006138 ORTHO05D007778 1.1e-10 71.6 224 29.0
Phvul.001G135400 Phaseolus vulgaris HOM05D006138 ORTHO05D007778 2.9e-08 63.5 107 34.6
FAN17G0457 Fragaria x ananassa HOM05D006138 ORTHO05D007778 6.0e-06 55.8 131 29.8


User provided reference genes

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