Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund24363 Selenicereus undatus HOM05D006248 ORTHO05D007896 3.6e-168 594.7 284 100.0
Hund24364 Selenicereus undatus HOM05D006248 ORTHO05D007896 5.0e-125 451.4 242 93.0
Hund24348 Selenicereus undatus HOM05D006248 ORTHO05D007896 1.1e-36 157.9 103 75.7
Hund24368 Selenicereus undatus HOM05D006248 ORTHO05D007896 2.7e-30 136.7 212 42.5
AUR62015459 Chenopodium quinoa HOM05D006248 ORTHO05D007896 6.7e-21 105.5 61 80.3
Gohir.A05G053300 Gossypium hirsutum HOM05D006248 ORTHO05D007896 7.4e-20 102.1 57 84.2
Gorai.009G056600 Gossypium raimondii HOM05D006248 ORTHO05D007896 7.4e-20 102.1 57 84.2
Gohir.D05G054900 Gossypium hirsutum HOM05D006248 ORTHO05D007896 9.7e-20 101.7 57 82.5
Nitab4.5_0005147g0010 Nicotiana tabacum HOM05D006248 ORTHO05D007896 9.7e-20 101.7 75 70.7
Nitab4.5_0006523g0010 Nicotiana tabacum HOM05D006248 ORTHO05D007896 9.7e-20 101.7 75 70.7
vmacro16799 Vaccinium macrocarpon HOM05D006248 ORTHO05D007896 9.7e-20 101.7 61 75.4
PGSC0003DMG402011138 Solanum tuberosum HOM05D006248 ORTHO05D007896 1.7e-19 100.9 70 72.9
EL10Ac3g05888 Beta vulgaris HOM05D006248 ORTHO05D007896 2.2e-19 100.5 61 77.0
ClCG02G020550 Citrullus lanatus HOM05D006248 ORTHO05D007896 2.2e-19 100.5 61 75.4
PSO384G3884 Papaver somniferum HOM05D006248 ORTHO05D007896 2.2e-19 100.5 100 52.0
Actinidia38318 Actinidia chinensis HOM05D006248 ORTHO05D007896 3.7e-19 99.8 61 73.8
Nn7g36251 Nelumbo nucifera HOM05D006248 ORTHO05D007896 3.7e-19 99.8 61 72.1
Psat1g022520 Pisum sativum HOM05D006248 ORTHO05D007896 3.7e-19 99.8 61 73.8
Sed0021098 Sechium edule HOM05D006248 ORTHO05D007896 3.7e-19 99.8 57 80.7
Sc06g0007960 Simmondsia chinensis HOM05D006248 ORTHO05D007896 3.7e-19 99.8 61 77.0
Medtr5g043620 Medicago truncatula HOM05D006248 ORTHO05D007896 4.8e-19 99.4 61 72.1
ATR0579G167 Amborella trichopoda HOM05D006248 ORTHO05D007896 6.3e-19 99.0 61 73.8
Aqoxy2G03376 Aquilegia oxysepala HOM05D006248 ORTHO05D007896 6.3e-19 99.0 61 75.4
CSS0008954 Camellia sinensis var. sinensis HOM05D006248 ORTHO05D007896 6.3e-19 99.0 61 75.4
Cfa020823 Carpinus fangiana HOM05D006248 ORTHO05D007896 6.3e-19 99.0 61 75.4
COL.COLO4_18812 Corchorus olitorius HOM05D006248 ORTHO05D007896 6.3e-19 99.0 61 75.4
MELO3C008959.2 Cucumis melo HOM05D006248 ORTHO05D007896 6.3e-19 99.0 61 73.8
Eucgr.C02495 Eucalyptus grandis HOM05D006248 ORTHO05D007896 6.3e-19 99.0 61 75.4
Prupe.7G263300 Prunus persica HOM05D006248 ORTHO05D007896 6.3e-19 99.0 61 73.8
QL02p093323 Quercus lobata HOM05D006248 ORTHO05D007896 6.3e-19 99.0 61 75.4
Thecc.09G029500 Theobroma cacao HOM05D006248 ORTHO05D007896 6.3e-19 99.0 61 75.4
CsaV3_2G008470 Cucumis sativus L. HOM05D006248 ORTHO05D007896 8.2e-19 98.6 61 73.8
CAN.G160.64 Capsicum annuum HOM05D006248 ORTHO05D007896 1.1e-18 98.2 61 75.4
CiPaw.15G168100 Carya illinoinensis HOM05D006248 ORTHO05D007896 1.1e-18 98.2 61 75.4
Peaxi162Scf00401g00615 Petunia axillaris HOM05D006248 ORTHO05D007896 1.1e-18 98.2 70 68.6
Solyc07g005580.4 Solanum lycopersicum HOM05D006248 ORTHO05D007896 1.1e-18 98.2 61 75.4
Sopen07g001690 Solanum pennellii HOM05D006248 ORTHO05D007896 1.1e-18 98.2 61 75.4
TAR374G0826 Trochodendron aralioides HOM05D006248 ORTHO05D007896 1.1e-18 98.2 61 75.4
Haze_19202 Corylus avellana HOM05D006248 ORTHO05D007896 1.4e-18 97.8 63 73.0
PGR102G2393 Punica granatum HOM05D006248 ORTHO05D007896 1.4e-18 97.8 61 75.4
TWI09G0649 Tripterygium wilfordii HOM05D006248 ORTHO05D007896 1.4e-18 97.8 61 73.8
arahy.Tifrunner.gnm1.ann1.73F3S2 Arachis hypogaea HOM05D006248 ORTHO05D007896 1.8e-18 97.4 61 72.1
CANSAT80G0015 Cannabis sativa HOM05D006248 ORTHO05D007896 1.8e-18 97.4 61 70.5
CANSAT80G1584 Cannabis sativa HOM05D006248 ORTHO05D007896 1.8e-18 97.4 61 70.5
CsaV3_4G030910 Cucumis sativus L. HOM05D006248 ORTHO05D007896 1.8e-18 97.4 61 72.1
Lj6g0025769 Lotus japonicus HOM05D006248 ORTHO05D007896 2.4e-18 97.1 61 72.1
PSO339G1376 Papaver somniferum HOM05D006248 ORTHO05D007896 2.4e-18 97.1 100 51.0
GSVIVG01023612001 Vitis vinifera HOM05D006248 ORTHO05D007896 2.4e-18 97.1 61 72.1
Ciclev10008803m.g Citrus clementina HOM05D006248 ORTHO05D007896 3.1e-18 96.7 63 74.6
Dinv41376 Davidia involucrata HOM05D000122 ORTHO05D000139 3.1e-18 96.7 63 71.4
Manes.14G143900 Manihot esculenta HOM05D006248 ORTHO05D007896 3.1e-18 96.7 100 51.0
Rhsim01G0033000 Rhododendron simsii HOM05D006248 ORTHO05D007896 3.1e-18 96.7 61 72.1
arahy.Tifrunner.gnm1.ann1.35XGVT Arachis hypogaea HOM05D006248 ORTHO05D007896 4.1e-18 96.3 61 70.5
Lalb_Chr08g0234181 Lupinus albus HOM05D006248 ORTHO05D007896 4.1e-18 96.3 61 73.8
Glyma.12G163500 Glycine max HOM05D006248 ORTHO05D007896 5.3e-18 95.9 61 72.1
Phvul.007G037000 Phaseolus vulgaris HOM05D006248 ORTHO05D007896 5.3e-18 95.9 61 72.1
Glyma.06G220300 Glycine max HOM05D006248 ORTHO05D007896 6.9e-18 95.5 61 72.1
Cc06_g14900 Coffea canephora HOM05D006248 ORTHO05D007896 9.1e-18 95.1 61 70.5
MD02G1007100 Malus domestica HOM05D006248 ORTHO05D007896 9.1e-18 95.1 61 72.1
arahy.Tifrunner.gnm1.ann1.VIT8JQ Arachis hypogaea HOM05D006248 ORTHO05D007896 1.2e-17 94.7 61 70.5
Ca_03171_v3 Cicer arietinum L. HOM05D006248 ORTHO05D007896 1.5e-17 94.4 61 68.9
Sed0009955 Sechium edule HOM05D006248 ORTHO05D007896 1.5e-17 94.4 61 70.5
Atru.chr7.37 Acer truncatum HOM05D006248 ORTHO05D007896 2.0e-17 94.0 61 70.5
Cpa.g.sc46.160 Carica papaya HOM05D006248 ORTHO05D007896 2.6e-17 93.6 61 72.1
FAN28G2468 Fragaria x ananassa HOM05D000122 ORTHO05D000139 2.6e-17 93.6 151 37.7
MD15G1144400 Malus domestica HOM05D006248 ORTHO05D007896 2.6e-17 93.6 61 68.9
Os10g0497100 Oryza sativa ssp. japonica HOM05D006248 ORTHO05D007896 2.6e-17 93.6 63 66.7
SalBow1G5186 Salvia bowleyana HOM05D006248 ORTHO05D007896 2.6e-17 93.6 61 70.5
TPR.G3534 Trifolium pratense HOM05D006248 ORTHO05D007896 2.6e-17 93.6 61 68.9
CiPaw.16G110600 Carya illinoinensis HOM05D006248 ORTHO05D007896 3.4e-17 93.2 61 70.5
MBI04_g39114_MAGBIO Magnolia biondii HOM05D006248 ORTHO05D007896 3.4e-17 93.2 63 71.4
Potri.006G183700 Populus trichocarpa HOM05D006248 ORTHO05D007896 3.4e-17 93.2 61 72.1
Carub.0007s0999 Capsella rubella HOM05D006248 ORTHO05D007896 4.5e-17 92.8 61 68.9
CARHR238450 Cardamine hirsuta HOM05D006248 ORTHO05D007896 4.5e-17 92.8 61 68.9
Duzib168G1034 Durio zibethinus HOM05D006248 ORTHO05D007896 5.9e-17 92.4 61 70.5
BcaNung00567 Brassica carinata HOM05D006248 ORTHO05D007896 7.7e-17 92.0 61 67.2
BcaNung04566 Brassica carinata HOM05D006248 ORTHO05D007896 7.7e-17 92.0 61 67.2
C07p58030 Brassica napus HOM05D002357 ORTHO05D007896 7.7e-17 92.0 61 67.2
BolC7t46261H Brassica oleracea HOM05D006248 ORTHO05D007896 7.7e-17 92.0 61 67.2
FAN26G2974 Fragaria x ananassa HOM05D000238 ORTHO05D007896 7.7e-17 92.0 61 68.9
SHI18557 Sapria himalayana HOM05D006248 ORTHO05D007896 7.7e-17 92.0 61 68.9
Sp7g28450 Schrenkiella parvula HOM05D006248 ORTHO05D007896 7.7e-17 92.0 61 67.2
A03p60090 Brassica napus HOM05D006248 ORTHO05D007896 1.0e-16 91.7 61 65.6
BraA03t15055Z Brassica rapa HOM05D006248 ORTHO05D007896 1.0e-16 91.7 61 65.6
Lj7A459G62 Lonicera japonica HOM05D006248 ORTHO05D007896 1.0e-16 91.7 61 68.9
HPP92_007369 Vanilla planifolia HOM05D006248 ORTHO05D007896 1.0e-16 91.7 61 72.1
FvH4_1g00880 Fragaria vesca HOM05D006248 ORTHO05D007896 1.3e-16 91.3 61 67.2
Gohir.A06G097800 Gossypium hirsutum HOM05D006248 ORTHO05D007896 1.3e-16 91.3 61 67.2
Gohir.D06G098450 Gossypium hirsutum HOM05D006248 ORTHO05D007896 1.3e-16 91.3 61 67.2
Oeu054273.3 Olea europaea HOM05D006248 ORTHO05D007896 1.3e-16 91.3 61 68.9
RcHm_v2.0_Chr2g0085591 Rosa chinensis HOM05D006248 ORTHO05D007896 1.7e-16 90.9 61 68.9
SGA_v2.0_scaffold347G49562 Striga asiatica HOM05D006248 ORTHO05D007896 2.2e-16 90.5 61 67.2
Duzib187G1891 Durio zibethinus HOM05D006248 ORTHO05D007896 2.9e-16 90.1 61 68.9
FAN23G2094 Fragaria x ananassa HOM05D000238 ORTHO05D001043 2.9e-16 90.1 61 67.2
Lsat_1_v5_gn_4_165100 Lactuca sativa HOM05D006248 ORTHO05D007896 2.9e-16 90.1 61 65.6
Zm00001eb220920 Zea mays HOM05D006248 ORTHO05D007896 3.8e-16 89.7 63 63.5
Aa31LG2G19940 Aethionema arabicum HOM05D006248 ORTHO05D007896 5.0e-16 89.4 61 63.9
AT4G30580 Arabidopsis thaliana HOM05D006248 ORTHO05D007896 5.0e-16 89.4 61 65.6
Migut.K00321 Erythranthe guttata HOM05D006248 ORTHO05D007896 5.0e-16 89.4 61 67.2
unitig_746.g26565 Utricularia gibba HOM05D006248 ORTHO05D007896 5.0e-16 89.4 61 68.9
Thhalv10025500m.g Eutrema salsugineum HOM05D006248 ORTHO05D007896 6.5e-16 89.0 61 65.6
HanXRQChr14g0448981 Helianthus annuus HOM05D006248 ORTHO05D007896 6.5e-16 89.0 61 63.9
AL7G21560 Arabidopsis lyrata HOM05D006248 ORTHO05D007896 8.5e-16 88.6 61 65.6
CDE11G0689 Ceratophyllum demersum HOM05D006248 ORTHO05D007896 8.5e-16 88.6 61 65.6
Gorai.010G113400 Gossypium raimondii HOM05D006248 ORTHO05D007896 8.5e-16 88.6 61 65.6
HanXRQChr15g0490751 Helianthus annuus HOM05D006248 ORTHO05D007896 8.5e-16 88.6 61 63.9
MSTRG.10698 Avicennia marina HOM05D006248 ORTHO05D007896 1.1e-15 88.2 61 67.2
ECA238G3803 Erigeron canadensis HOM05D006248 ORTHO05D007896 1.1e-15 88.2 61 63.9
Lsat_1_v5_gn_2_85220 Lactuca sativa HOM05D006248 ORTHO05D007896 1.9e-15 87.4 63 63.5
Mapoly0168s0025 Marchantia polymorpha HOM05D006248 ORTHO05D007896 3.2e-15 86.7 61 59.0
THA.LOC104803540 Tarenaya hassleriana HOM05D006248 ORTHO05D007896 5.5e-15 85.9 61 62.3
DCAR_019396 Daucus carota HOM05D006248 ORTHO05D007896 1.2e-14 84.7 61 63.9
SMO367G0591 Selaginella moellendorffii HOM05D006248 ORTHO05D007896 1.6e-14 84.3 61 62.3
Pp3c2_20500 Physcomitrium patens HOM05D006248 ORTHO05D007896 2.1e-14 84.0 61 63.9
CBR_g21007 Chara braunii HOM05D006248 ORTHO05D007896 6.1e-14 82.4 63 55.6
Hma1.2p1_0222F.1_g093600 Hydrangea macrophylla HOM05D006248 ORTHO05D007896 1.0e-13 81.6 87 52.9
Actinidia27193 Actinidia chinensis HOM05D006248 ORTHO05D007896 8.8e-13 78.6 166 36.7
Cre09.g398289 Chlamydomonas reinhardtii HOM05D006248 ORTHO05D007896 7.4e-12 75.5 63 57.1
PRCOL_00000503 Prasinoderma coloniale HOM05D006248 ORTHO05D007896 7.4e-12 75.5 62 56.5
VMungo0720G3169 Vigna mungo HOM05D006248 ORTHO05D007896 4.5e-09 66.2 79 45.6
Sabra06G0139600 Salix brachista HOM05D006248 ORTHO05D007896 2.9e-08 63.5 127 34.6
MCO11G046 Micromonas commoda HOM05D006248 ORTHO05D007896 5.0e-08 62.8 61 47.5
AagrBONN_evm.TU.Sc2ySwM_362.1593 Anthoceros agrestis HOM05D006248 ORTHO05D007896 1.5e-07 61.2 54 50.0
BcaNung04570 Brassica carinata HOM05D006248 ORTHO05D007896 3.2e-07 60.1 47 61.7
HPP92_007364 Vanilla planifolia HOM05D006248 ORTHO05D007896 8.0e-06 55.5 66 50.0


User provided reference genes

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