Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund24348 Selenicereus undatus HOM05D006248 ORTHO05D007896 3.6e-70 268.1 130 100.0
Hund24364 Selenicereus undatus HOM05D006248 ORTHO05D007896 2.1e-38 162.5 100 80.0
Hund24363 Selenicereus undatus HOM05D006248 ORTHO05D007896 2.0e-36 156.0 103 75.7
Hund24368 Selenicereus undatus HOM05D006248 ORTHO05D007896 8.1e-30 134.0 83 80.7
AUR62015459 Chenopodium quinoa HOM05D006248 ORTHO05D007896 5.2e-29 131.3 83 78.3
EL10Ac3g05888 Beta vulgaris HOM05D006248 ORTHO05D007896 6.4e-27 124.4 83 73.5
Nn7g36251 Nelumbo nucifera HOM05D006248 ORTHO05D007896 1.1e-26 123.6 83 71.1
Sc06g0007960 Simmondsia chinensis HOM05D006248 ORTHO05D007896 1.4e-26 123.2 83 72.3
ClCG02G020550 Citrullus lanatus HOM05D006248 ORTHO05D007896 2.4e-26 122.5 83 69.9
arahy.Tifrunner.gnm1.ann1.73F3S2 Arachis hypogaea HOM05D006248 ORTHO05D007896 7.1e-26 120.9 83 69.9
MELO3C008959.2 Cucumis melo HOM05D006248 ORTHO05D007896 7.1e-26 120.9 83 68.7
Nitab4.5_0005147g0010 Nicotiana tabacum HOM05D006248 ORTHO05D007896 7.1e-26 120.9 92 66.3
Nitab4.5_0006523g0010 Nicotiana tabacum HOM05D006248 ORTHO05D007896 7.1e-26 120.9 92 66.3
Psat1g022520 Pisum sativum HOM05D006248 ORTHO05D007896 7.1e-26 120.9 83 68.7
QL02p093323 Quercus lobata HOM05D006248 ORTHO05D007896 7.1e-26 120.9 83 69.9
CSS0008954 Camellia sinensis var. sinensis HOM05D006248 ORTHO05D007896 9.2e-26 120.6 83 69.9
CsaV3_2G008470 Cucumis sativus L. HOM05D006248 ORTHO05D007896 9.2e-26 120.6 83 68.7
Eucgr.C02495 Eucalyptus grandis HOM05D006248 ORTHO05D007896 9.2e-26 120.6 83 69.9
Medtr5g043620 Medicago truncatula HOM05D006248 ORTHO05D007896 9.2e-26 120.6 83 67.5
Thecc.09G029500 Theobroma cacao HOM05D006248 ORTHO05D007896 9.2e-26 120.6 83 69.9
Actinidia38318 Actinidia chinensis HOM05D006248 ORTHO05D007896 1.2e-25 120.2 83 68.7
Lj6g0025769 Lotus japonicus HOM05D006248 ORTHO05D007896 1.2e-25 120.2 83 68.7
Sed0021098 Sechium edule HOM05D006248 ORTHO05D007896 1.2e-25 120.2 83 68.7
PGSC0003DMG402011138 Solanum tuberosum HOM05D006248 ORTHO05D007896 1.2e-25 120.2 92 66.3
arahy.Tifrunner.gnm1.ann1.35XGVT Arachis hypogaea HOM05D006248 ORTHO05D007896 1.6e-25 119.8 83 68.7
Prupe.7G263300 Prunus persica HOM05D006248 ORTHO05D007896 1.6e-25 119.8 83 68.7
TAR374G0826 Trochodendron aralioides HOM05D006248 ORTHO05D007896 1.6e-25 119.8 83 69.9
CsaV3_4G030910 Cucumis sativus L. HOM05D006248 ORTHO05D007896 2.1e-25 119.4 83 67.5
arahy.Tifrunner.gnm1.ann1.VIT8JQ Arachis hypogaea HOM05D006248 ORTHO05D007896 4.6e-25 118.2 83 68.7
CANSAT80G0015 Cannabis sativa HOM05D006248 ORTHO05D007896 4.6e-25 118.2 83 65.1
CANSAT80G1584 Cannabis sativa HOM05D006248 ORTHO05D007896 4.6e-25 118.2 83 65.1
Ca_03171_v3 Cicer arietinum L. HOM05D006248 ORTHO05D007896 4.6e-25 118.2 83 67.5
Gohir.A05G053300 Gossypium hirsutum HOM05D006248 ORTHO05D007896 4.6e-25 118.2 83 69.9
Gorai.009G056600 Gossypium raimondii HOM05D006248 ORTHO05D007896 4.6e-25 118.2 83 69.9
Aqoxy2G03376 Aquilegia oxysepala HOM05D006248 ORTHO05D007896 6.0e-25 117.9 83 68.7
CAN.G160.64 Capsicum annuum HOM05D006248 ORTHO05D007896 6.0e-25 117.9 83 68.7
Gohir.D05G054900 Gossypium hirsutum HOM05D006248 ORTHO05D007896 6.0e-25 117.9 83 68.7
Phvul.007G037000 Phaseolus vulgaris HOM05D006248 ORTHO05D007896 6.0e-25 117.9 83 67.5
Solyc07g005580.4 Solanum lycopersicum HOM05D006248 ORTHO05D007896 6.0e-25 117.9 83 68.7
Sopen07g001690 Solanum pennellii HOM05D006248 ORTHO05D007896 6.0e-25 117.9 83 68.7
vmacro16799 Vaccinium macrocarpon HOM05D006248 ORTHO05D007896 6.0e-25 117.9 83 67.5
Glyma.06G220300 Glycine max HOM05D006248 ORTHO05D007896 7.8e-25 117.5 83 67.5
Glyma.12G163500 Glycine max HOM05D006248 ORTHO05D007896 7.8e-25 117.5 83 66.3
Peaxi162Scf00401g00615 Petunia axillaris HOM05D006248 ORTHO05D007896 7.8e-25 117.5 92 63.0
CiPaw.15G168100 Carya illinoinensis HOM05D006248 ORTHO05D007896 1.0e-24 117.1 83 68.7
Potri.006G183700 Populus trichocarpa HOM05D006248 ORTHO05D007896 1.0e-24 117.1 83 68.7
Ciclev10008803m.g Citrus clementina HOM05D006248 ORTHO05D007896 1.3e-24 116.7 85 68.2
Rhsim01G0033000 Rhododendron simsii HOM05D006248 ORTHO05D007896 1.3e-24 116.7 83 66.3
Atru.chr7.37 Acer truncatum HOM05D006248 ORTHO05D007896 1.7e-24 116.3 83 65.1
ATR0579G167 Amborella trichopoda HOM05D006248 ORTHO05D007896 1.7e-24 116.3 83 68.7
PGR102G2393 Punica granatum HOM05D006248 ORTHO05D007896 1.7e-24 116.3 83 67.5
GSVIVG01023612001 Vitis vinifera HOM05D006248 ORTHO05D007896 1.7e-24 116.3 83 65.1
Dinv41376 Davidia involucrata HOM05D000122 ORTHO05D000139 2.3e-24 115.9 85 65.9
TWI09G0649 Tripterygium wilfordii HOM05D006248 ORTHO05D007896 2.3e-24 115.9 83 65.1
Cfa020823 Carpinus fangiana HOM05D006248 ORTHO05D007896 3.0e-24 115.5 83 67.5
Lj7A459G62 Lonicera japonica HOM05D006248 ORTHO05D007896 3.9e-24 115.2 130 50.8
Manes.14G143900 Manihot esculenta HOM05D006248 ORTHO05D007896 3.9e-24 115.2 85 63.5
Os10g0497100 Oryza sativa ssp. japonica HOM05D006248 ORTHO05D007896 5.1e-24 114.8 85 63.5
PSO384G3884 Papaver somniferum HOM05D006248 ORTHO05D007896 5.1e-24 114.8 83 65.1
Sed0009955 Sechium edule HOM05D006248 ORTHO05D007896 5.1e-24 114.8 83 65.1
TPR.G3534 Trifolium pratense HOM05D006248 ORTHO05D007896 5.1e-24 114.8 83 65.1
Cpa.g.sc46.160 Carica papaya HOM05D006248 ORTHO05D007896 6.6e-24 114.4 83 66.3
Haze_19202 Corylus avellana HOM05D006248 ORTHO05D007896 6.6e-24 114.4 85 65.9
MBI04_g39114_MAGBIO Magnolia biondii HOM05D006248 ORTHO05D007896 6.6e-24 114.4 85 67.1
COL.COLO4_18812 Corchorus olitorius HOM05D006248 ORTHO05D007896 8.6e-24 114.0 78 70.5
MD15G1144400 Malus domestica HOM05D006248 ORTHO05D007896 8.6e-24 114.0 83 65.1
Lalb_Chr08g0234181 Lupinus albus HOM05D006248 ORTHO05D007896 1.1e-23 113.6 83 65.1
HPP92_007369 Vanilla planifolia HOM05D006248 ORTHO05D007896 1.1e-23 113.6 83 67.5
unitig_746.g26565 Utricularia gibba HOM05D006248 ORTHO05D007896 1.5e-23 113.2 83 67.5
Cc06_g14900 Coffea canephora HOM05D006248 ORTHO05D007896 1.9e-23 112.8 83 62.7
Oeu054273.3 Olea europaea HOM05D006248 ORTHO05D007896 1.9e-23 112.8 83 65.1
SalBow1G5186 Salvia bowleyana HOM05D006248 ORTHO05D007896 1.9e-23 112.8 83 65.1
CARHR238450 Cardamine hirsuta HOM05D006248 ORTHO05D007896 2.5e-23 112.5 83 62.7
CiPaw.16G110600 Carya illinoinensis HOM05D006248 ORTHO05D007896 2.5e-23 112.5 83 65.1
SGA_v2.0_scaffold347G49562 Striga asiatica HOM05D006248 ORTHO05D007896 2.5e-23 112.5 83 63.9
Carub.0007s0999 Capsella rubella HOM05D006248 ORTHO05D007896 4.3e-23 111.7 83 62.7
Duzib168G1034 Durio zibethinus HOM05D006248 ORTHO05D007896 4.3e-23 111.7 83 65.1
RcHm_v2.0_Chr2g0085591 Rosa chinensis HOM05D006248 ORTHO05D007896 4.3e-23 111.7 83 63.9
FAN23G2094 Fragaria x ananassa HOM05D000238 ORTHO05D001043 5.6e-23 111.3 83 63.9
FAN26G2974 Fragaria x ananassa HOM05D000238 ORTHO05D007896 5.6e-23 111.3 83 63.9
PSO339G1376 Papaver somniferum HOM05D006248 ORTHO05D007896 5.6e-23 111.3 83 63.9
BcaNung00567 Brassica carinata HOM05D006248 ORTHO05D007896 7.3e-23 110.9 83 62.7
BcaNung04566 Brassica carinata HOM05D006248 ORTHO05D007896 7.3e-23 110.9 83 62.7
C07p58030 Brassica napus HOM05D002357 ORTHO05D007896 7.3e-23 110.9 83 62.7
BolC7t46261H Brassica oleracea HOM05D006248 ORTHO05D007896 7.3e-23 110.9 83 62.7
Lsat_1_v5_gn_4_165100 Lactuca sativa HOM05D006248 ORTHO05D007896 7.3e-23 110.9 83 62.7
Sp7g28450 Schrenkiella parvula HOM05D006248 ORTHO05D007896 7.3e-23 110.9 83 62.7
A03p60090 Brassica napus HOM05D006248 ORTHO05D007896 9.5e-23 110.5 83 61.4
BraA03t15055Z Brassica rapa HOM05D006248 ORTHO05D007896 9.5e-23 110.5 83 61.4
HanXRQChr15g0490751 Helianthus annuus HOM05D006248 ORTHO05D007896 9.5e-23 110.5 83 62.7
CDE11G0689 Ceratophyllum demersum HOM05D006248 ORTHO05D007896 1.2e-22 110.2 83 63.9
FvH4_1g00880 Fragaria vesca HOM05D006248 ORTHO05D007896 1.6e-22 109.8 83 62.7
Gohir.A06G097800 Gossypium hirsutum HOM05D006248 ORTHO05D007896 1.6e-22 109.8 82 62.2
Gohir.D06G098450 Gossypium hirsutum HOM05D006248 ORTHO05D007896 1.6e-22 109.8 82 62.2
MSTRG.10698 Avicennia marina HOM05D006248 ORTHO05D007896 2.8e-22 109.0 83 62.7
MD02G1007100 Malus domestica HOM05D006248 ORTHO05D007896 2.8e-22 109.0 78 67.9
SHI18557 Sapria himalayana HOM05D006248 ORTHO05D007896 2.8e-22 109.0 83 62.7
Zm00001eb220920 Zea mays HOM05D006248 ORTHO05D007896 2.8e-22 109.0 85 61.2
Migut.K00321 Erythranthe guttata HOM05D006248 ORTHO05D007896 3.6e-22 108.6 83 61.4
AT4G30580 Arabidopsis thaliana HOM05D006248 ORTHO05D007896 4.7e-22 108.2 83 61.4
Aa31LG2G19940 Aethionema arabicum HOM05D006248 ORTHO05D007896 6.2e-22 107.8 83 57.8
Thhalv10025500m.g Eutrema salsugineum HOM05D006248 ORTHO05D007896 6.2e-22 107.8 83 61.4
THA.LOC104803540 Tarenaya hassleriana HOM05D006248 ORTHO05D007896 6.2e-22 107.8 83 60.2
Duzib187G1891 Durio zibethinus HOM05D006248 ORTHO05D007896 8.1e-22 107.5 83 62.7
ECA238G3803 Erigeron canadensis HOM05D006248 ORTHO05D007896 8.1e-22 107.5 83 60.2
Gorai.010G113400 Gossypium raimondii HOM05D006248 ORTHO05D007896 1.1e-21 107.1 82 61.0
HanXRQChr14g0448981 Helianthus annuus HOM05D006248 ORTHO05D007896 1.8e-21 106.3 83 59.0
AL7G21560 Arabidopsis lyrata HOM05D006248 ORTHO05D007896 2.4e-21 105.9 83 60.2
DCAR_019396 Daucus carota HOM05D006248 ORTHO05D007896 8.9e-21 104.0 83 59.0
Lsat_1_v5_gn_2_85220 Lactuca sativa HOM05D006248 ORTHO05D007896 8.9e-21 104.0 85 58.8
Hma1.2p1_0222F.1_g093600 Hydrangea macrophylla HOM05D006248 ORTHO05D007896 2.6e-20 102.4 109 53.2
Mapoly0168s0025 Marchantia polymorpha HOM05D006248 ORTHO05D007896 1.7e-19 99.8 83 54.2
SMO367G0591 Selaginella moellendorffii HOM05D006248 ORTHO05D007896 8.4e-19 97.4 83 55.4
CBR_g21007 Chara braunii HOM05D006248 ORTHO05D007896 2.4e-18 95.9 85 51.8
Pp3c2_20500 Physcomitrium patens HOM05D006248 ORTHO05D007896 9.2e-18 94.0 83 54.2
Actinidia27193 Actinidia chinensis HOM05D006248 ORTHO05D007896 7.8e-17 90.9 85 62.4
FAN28G2468 Fragaria x ananassa HOM05D000122 ORTHO05D000139 1.7e-16 89.7 60 68.3
Cre09.g398289 Chlamydomonas reinhardtii HOM05D006248 ORTHO05D007896 2.3e-16 89.4 85 52.9
Sabra06G0139600 Salix brachista HOM05D006248 ORTHO05D007896 3.3e-15 85.5 149 37.6
PRCOL_00000503 Prasinoderma coloniale HOM05D006248 ORTHO05D007896 4.3e-15 85.1 83 50.6
VMungo0720G3169 Vigna mungo HOM05D006248 ORTHO05D007896 2.8e-14 82.4 57 66.7
MCO11G046 Micromonas commoda HOM05D006248 ORTHO05D007896 4.9e-11 71.6 83 43.4
AagrBONN_evm.TU.Sc2ySwM_362.1593 Anthoceros agrestis HOM05D006248 ORTHO05D007896 1.1e-07 60.5 62 45.2
BcaNung04570 Brassica carinata HOM05D006248 ORTHO05D007896 4.3e-07 58.5 47 63.8
HPP92_007364 Vanilla planifolia HOM05D006248 ORTHO05D007896 7.3e-07 57.8 61 55.7


User provided reference genes

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