Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund24191 Selenicereus undatus HOM05D007217 ORTHO05D009092 4.3e-101 371.3 187 100.0
AUR62017567 Chenopodium quinoa HOM05D007217 ORTHO05D009092 6.2e-15 85.1 85 54.1
Sc06g0009730 Simmondsia chinensis HOM05D007217 ORTHO05D009092 6.8e-14 81.6 59 64.4
EL10Ac9g22805 Beta vulgaris HOM05D007217 ORTHO05D009092 1.5e-13 80.5 67 64.2
Dinv20263 Davidia involucrata HOM05D007217 ORTHO05D009092 5.8e-13 78.6 63 55.6
GSVIVG01019606001 Vitis vinifera HOM05D007217 ORTHO05D009092 9.9e-13 77.8 59 62.7
Duzib235G1460 Durio zibethinus HOM05D007217 ORTHO05D009092 4.9e-12 75.5 58 63.8
Prupe.4G105800 Prunus persica HOM05D007217 ORTHO05D009092 4.9e-12 75.5 59 64.4
RcHm_v2.0_Chr5g0019241 Rosa chinensis HOM05D007217 ORTHO05D009092 6.4e-12 75.1 53 69.8
MELO3C015565.2 Cucumis melo HOM05D007217 ORTHO05D009092 8.4e-12 74.7 63 57.1
Rhsim02G0191400 Rhododendron simsii HOM05D007217 ORTHO05D009092 1.1e-11 74.3 49 71.4
CiPaw.10G112300 Carya illinoinensis HOM05D007217 ORTHO05D009092 1.4e-11 73.9 74 50.0
Rhsim04G0112200 Rhododendron simsii HOM05D007217 ORTHO05D009092 1.4e-11 73.9 69 55.1
COL.COLO4_30930 Corchorus olitorius HOM05D007217 ORTHO05D009092 1.9e-11 73.6 58 62.1
Atru.chr10.619 Acer truncatum HOM05D007217 ORTHO05D009092 2.4e-11 73.2 53 66.0
MELO3C022720.2 Cucumis melo HOM05D007217 ORTHO05D009092 2.4e-11 73.2 62 56.5
QL05p062902 Quercus lobata HOM05D007217 ORTHO05D009092 2.4e-11 73.2 50 72.0
Rhsim09G0182200 Rhododendron simsii HOM05D007217 ORTHO05D009092 2.4e-11 73.2 49 69.4
Manes.02G204000 Manihot esculenta HOM05D007217 ORTHO05D009092 3.2e-11 72.8 62 59.7
THA.LOC104808222 Tarenaya hassleriana HOM05D007217 ORTHO05D009092 3.2e-11 72.8 76 50.0
Dinv01436 Davidia involucrata HOM05D007217 ORTHO05D009092 4.1e-11 72.4 53 60.4
Ciclev10018165m.g Citrus clementina HOM05D007217 ORTHO05D009092 5.4e-11 72.0 58 62.1
CsaV3_3G030060 Cucumis sativus L. HOM05D007217 ORTHO05D009092 5.4e-11 72.0 58 56.9
FvH4_3g11820 Fragaria vesca HOM05D007217 ORTHO05D009092 5.4e-11 72.0 53 66.0
FAN16G2896 Fragaria x ananassa HOM05D007217 ORTHO05D009092 5.4e-11 72.0 53 66.0
Thecc.06G135800 Theobroma cacao HOM05D007217 ORTHO05D009092 5.4e-11 72.0 53 64.2
ClCG07G002120 Citrullus lanatus HOM05D007217 ORTHO05D009092 7.1e-11 71.6 58 58.6
FAN21G1503 Fragaria x ananassa HOM05D007217 ORTHO05D009092 9.2e-11 71.2 53 66.0
Nn7g37971 Nelumbo nucifera HOM05D007217 ORTHO05D009092 9.2e-11 71.2 59 57.6
Ciclev10029535m.g Citrus clementina HOM05D007217 ORTHO05D009092 1.2e-10 70.9 58 60.3
Cc01_g06080 Coffea canephora HOM05D007217 ORTHO05D009092 1.2e-10 70.9 52 63.5
Peaxi162Scf00586g00008 Petunia axillaris HOM05D007217 ORTHO05D009092 1.2e-10 70.9 58 58.6
Sed0002565 Sechium edule HOM05D007217 ORTHO05D009092 1.2e-10 70.9 58 56.9
CsaV3_4G011770 Cucumis sativus L. HOM05D007217 ORTHO05D009092 1.6e-10 70.5 63 57.1
Gohir.A06G140100 Gossypium hirsutum HOM05D007217 ORTHO05D009092 1.6e-10 70.5 53 62.3
Gohir.D06G146500 Gossypium hirsutum HOM05D007217 ORTHO05D009092 1.6e-10 70.5 53 62.3
Gorai.010G170900 Gossypium raimondii HOM05D007217 ORTHO05D009092 1.6e-10 70.5 53 62.3
MSTRG.12451 Avicennia marina HOM05D007217 ORTHO05D009092 2.1e-10 70.1 68 50.0
BcaC03g15989 Brassica carinata HOM05D007217 ORTHO05D009092 2.1e-10 70.1 97 42.3
C02p37450 Brassica napus HOM05D004952 ORTHO05D006131 2.1e-10 70.1 97 42.3
BolC2t09757H Brassica oleracea HOM05D004952 ORTHO05D006131 2.1e-10 70.1 97 42.3
Lsat_1_v5_gn_4_36120 Lactuca sativa HOM05D007217 ORTHO05D009092 2.1e-10 70.1 52 59.6
Solyc01g007180.3 Solanum lycopersicum HOM05D007217 ORTHO05D009092 2.1e-10 70.1 58 56.9
Sopen01g003160 Solanum pennellii HOM05D007217 ORTHO05D009092 2.1e-10 70.1 58 56.9
CARHR074240 Cardamine hirsuta HOM05D007217 ORTHO05D009092 4.6e-10 68.9 50 64.0
Cpa.g.sc64.50 Carica papaya HOM05D007217 ORTHO05D009092 4.6e-10 68.9 70 51.4
PGSC0003DMG400021318 Solanum tuberosum HOM05D007217 ORTHO05D009092 7.8e-10 68.2 58 56.9
MD05G1258900 Malus domestica HOM05D007217 ORTHO05D009092 1.0e-09 67.8 59 55.9
BraA02t07362Z Brassica rapa HOM05D004952 ORTHO05D006131 1.3e-09 67.4 66 51.5
Aa31LG4G550 Aethionema arabicum HOM05D002649 ORTHO05D002838 1.7e-09 67.0 63 55.6
AL2G41250 Arabidopsis lyrata HOM05D007217 ORTHO05D009092 1.7e-09 67.0 63 52.4
Thhalv10019705m.g Eutrema salsugineum HOM05D007217 ORTHO05D009092 2.3e-09 66.6 63 54.0
Gohir.D10G048000 Gossypium hirsutum HOM05D007217 ORTHO05D009092 2.3e-09 66.6 53 58.5
Gorai.011G051100 Gossypium raimondii HOM05D007217 ORTHO05D009092 2.3e-09 66.6 53 58.5
MD10G1238500 Malus domestica HOM05D007217 ORTHO05D009092 2.3e-09 66.6 71 50.7
AT1G80245 Arabidopsis thaliana HOM05D007217 ORTHO05D009092 3.0e-09 66.2 51 56.9
SalBow8G5173 Salvia bowleyana HOM05D007217 ORTHO05D009092 3.0e-09 66.2 54 55.6
Sp5g35560 Schrenkiella parvula HOM05D007217 ORTHO05D009092 5.1e-09 65.5 51 58.8
BcaB05g25284 Brassica carinata HOM05D004952 ORTHO05D006131 6.6e-09 65.1 66 50.0
Carub.0007s3329 Capsella rubella HOM05D007217 ORTHO05D009092 6.6e-09 65.1 63 52.4
Sabra01G0058500 Salix brachista HOM05D007217 ORTHO05D009092 8.6e-09 64.7 53 54.7
unitig_749.g13716 Utricularia gibba HOM05D007217 ORTHO05D009092 8.6e-09 64.7 60 48.3
Migut.N02356 Erythranthe guttata HOM05D007217 ORTHO05D009092 1.1e-08 64.3 58 48.3
TWI09G0397 Tripterygium wilfordii HOM05D007217 ORTHO05D009092 1.1e-08 64.3 60 58.3
Potri.001G081300 Populus trichocarpa HOM05D007217 ORTHO05D009092 1.5e-08 63.9 53 54.7
Sp1g21760 Schrenkiella parvula HOM05D007217 ORTHO05D009092 1.5e-08 63.9 96 40.6
Medtr8g011490 Medicago truncatula HOM05D007217 ORTHO05D009092 2.5e-08 63.2 71 50.7
AT4G00695 Arabidopsis thaliana HOM05D007217 ORTHO05D009092 3.3e-08 62.8 64 56.2
Oeu043290.1 Olea europaea HOM05D007217 ORTHO05D009092 3.3e-08 62.8 59 47.5
Gohir.A10G046700 Gossypium hirsutum HOM05D007217 ORTHO05D009092 4.3e-08 62.4 53 54.7
Lsat_1_v5_gn_7_8820 Lactuca sativa HOM05D007217 ORTHO05D009092 4.3e-08 62.4 51 54.9
Potri.003G149100 Populus trichocarpa HOM05D007217 ORTHO05D009092 4.3e-08 62.4 51 54.9
TWI09G0788 Tripterygium wilfordii HOM05D007217 ORTHO05D009092 5.6e-08 62.0 60 56.7
Eucgr.E02022 Eucalyptus grandis HOM05D007217 ORTHO05D009092 9.6e-08 61.2 51 58.8
Eucgr.E04359 Eucalyptus grandis HOM05D007217 ORTHO05D009092 9.6e-08 61.2 51 58.8
HanXRQChr04g0107331 Helianthus annuus HOM05D007217 ORTHO05D009092 9.6e-08 61.2 70 45.7
Lj5g0013157 Lotus japonicus HOM05D007217 ORTHO05D009092 9.6e-08 61.2 53 60.4
Rhsim05G0134700 Rhododendron simsii HOM05D007217 ORTHO05D009092 1.6e-07 60.5 49 65.3
DCAR_001337 Daucus carota HOM05D007217 ORTHO05D009092 2.1e-07 60.1 59 49.2
MBI18_g37406_MAGBIO Magnolia biondii HOM05D007217 ORTHO05D009092 2.1e-07 60.1 57 50.9
C02p14430 Brassica napus HOM05D007217 ORTHO05D009092 2.8e-07 59.7 51 54.9
BolC2t07567H Brassica oleracea HOM05D007217 ORTHO05D009092 2.8e-07 59.7 51 54.9
SGA_v2.0_scaffold3G01474 Striga asiatica HOM05D007217 ORTHO05D009092 2.8e-07 59.7 58 48.3
DCAR_031675 Daucus carota HOM05D007217 ORTHO05D009092 3.6e-07 59.3 59 49.2
Glyma.08G176100 Glycine max HOM05D007217 ORTHO05D009092 6.2e-07 58.5 49 59.2
Glyma.15G250400 Glycine max HOM05D007217 ORTHO05D009092 6.2e-07 58.5 49 59.2
Lj6g0006317 Lotus japonicus HOM05D007217 ORTHO05D009092 6.2e-07 58.5 53 58.5
Nitab4.5_0004758g0070 Nicotiana tabacum HOM05D007217 ORTHO05D009092 8.1e-07 58.2 66 47.0
Lalb_Chr16g0392431 Lupinus albus HOM05D007217 ORTHO05D009092 1.1e-06 57.8 47 57.4
AL7G47090 Arabidopsis lyrata HOM05D007217 ORTHO05D009092 1.4e-06 57.4 64 50.0
Phvul.008G108200 Phaseolus vulgaris HOM05D007217 ORTHO05D009092 5.2e-06 55.5 47 55.3
Psat0s5329g0080 Pisum sativum HOM05D007217 ORTHO05D009092 6.8e-06 55.1 49 55.1


User provided reference genes

Program Settings