Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund24148 Selenicereus undatus HOM05D007219 ORTHO05D008995 6.6e-142 507.3 246 100.0
GSVIVG01030037001 Vitis vinifera HOM05D007219 ORTHO05D008995 9.1e-83 310.8 185 80.0
Prupe.3G202800 Prunus persica HOM05D007219 ORTHO05D008995 3.5e-82 308.9 192 79.2
TAR626G0546 Trochodendron aralioides HOM05D007219 ORTHO05D008995 2.9e-81 305.8 188 79.3
CSS0025035 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 8.5e-81 304.3 184 79.3
Nn1g03266 Nelumbo nucifera HOM05D007219 ORTHO05D008995 9.4e-80 300.8 191 75.4
RcHm_v2.0_Chr2g0156861 Rosa chinensis HOM05D007219 ORTHO05D008995 9.4e-80 300.8 191 78.0
QL08p028873 Quercus lobata HOM05D007219 ORTHO05D008995 3.6e-79 298.9 184 77.2
Hma1.2p1_0133F.1_g061230 Hydrangea macrophylla HOM05D007219 ORTHO05D008995 4.7e-79 298.5 193 73.6
MD09G1120700 Malus domestica HOM05D007219 ORTHO05D008995 8.0e-79 297.7 192 76.0
FvH4_6g41300 Fragaria vesca HOM05D007219 ORTHO05D008995 1.8e-78 296.6 184 77.2
Cpa.g.sc395.3 Carica papaya HOM05D007219 ORTHO05D008995 2.3e-78 296.2 188 77.1
CAN.G716.12 Capsicum annuum HOM05D007219 ORTHO05D008995 3.0e-78 295.8 188 74.5
Dinv05845 Davidia involucrata HOM05D007219 ORTHO05D008995 6.8e-78 294.7 184 78.3
CsaV3_7G002720 Cucumis sativus L. HOM05D007219 ORTHO05D008995 8.8e-78 294.3 187 76.5
FAN14G1895 Fragaria x ananassa HOM05D007219 ORTHO05D008995 8.8e-78 294.3 184 76.6
Atru.chr6.3346 Acer truncatum HOM05D007219 ORTHO05D008995 7.5e-77 291.2 188 76.1
CANSAT64G0298 Cannabis sativa HOM05D007219 ORTHO05D008995 1.7e-76 290.0 195 72.8
THA.LOC104826618 Tarenaya hassleriana HOM05D007219 ORTHO05D008995 2.2e-76 289.7 188 74.5
Duzib138G0301 Durio zibethinus HOM05D007219 ORTHO05D008995 3.7e-76 288.9 184 76.1
vmacro12114 Vaccinium macrocarpon HOM05D007219 ORTHO05D008995 3.7e-76 288.9 184 75.5
Cc07_g19250 Coffea canephora HOM05D007219 ORTHO05D008995 1.1e-75 287.3 184 76.1
Migut.M00020 Erythranthe guttata HOM05D007219 ORTHO05D008995 1.1e-75 287.3 184 75.0
Potri.014G161800 Populus trichocarpa HOM05D007219 ORTHO05D008995 5.4e-75 285.0 202 69.8
AT2G04845 Arabidopsis thaliana HOM05D007219 ORTHO05D008995 7.0e-75 284.6 187 72.7
Thecc.01G189100 Theobroma cacao HOM05D007219 ORTHO05D008995 7.0e-75 284.6 184 75.0
Peaxi162Scf00147g01822 Petunia axillaris HOM05D007219 ORTHO05D008995 9.1e-75 284.3 184 73.4
Sp3g23430 Schrenkiella parvula HOM05D007219 ORTHO05D008995 1.2e-74 283.9 193 70.5
Sopen05g025870 Solanum pennellii HOM05D007219 ORTHO05D008995 1.2e-74 283.9 188 71.8
Lj6g0005071 Lotus japonicus HOM05D007219 ORTHO05D008995 1.6e-74 283.5 183 73.8
AUR62017530 Chenopodium quinoa HOM05D007219 ORTHO05D008995 2.0e-74 283.1 249 60.6
SalBow7G0564 Salvia bowleyana HOM05D007219 ORTHO05D008995 2.0e-74 283.1 193 69.9
Manes.12G083700 Manihot esculenta HOM05D007219 ORTHO05D008995 3.5e-74 282.3 205 69.3
Glyma.13G025700 Glycine max HOM05D007219 ORTHO05D008995 7.7e-74 281.2 183 74.3
MSTRG.14930 Avicennia marina HOM05D007219 ORTHO05D008995 1.0e-73 280.8 184 73.9
Gohir.A07G167500 Gossypium hirsutum HOM05D007219 ORTHO05D008995 1.0e-73 280.8 185 75.1
HanXRQChr12g0373931 Helianthus annuus HOM05D007219 ORTHO05D008995 1.0e-73 280.8 190 74.2
Gorai.001G193200 Gossypium raimondii HOM05D007219 ORTHO05D008995 1.3e-73 280.4 185 74.1
Lsat_1_v5_gn_5_121560 Lactuca sativa HOM05D007219 ORTHO05D008995 1.3e-73 280.4 188 73.9
DCAR_019229 Daucus carota HOM05D007219 ORTHO05D008995 1.7e-73 280.0 198 70.7
Nitab4.5_0011106g0020 Nicotiana tabacum HOM05D007219 ORTHO05D008995 2.9e-73 279.3 184 73.4
Gohir.D07G173000 Gossypium hirsutum HOM05D007219 ORTHO05D008995 3.8e-73 278.9 185 73.5
CARHR102840 Cardamine hirsuta HOM05D007219 ORTHO05D008995 5.0e-73 278.5 187 70.1
Sed0018447 Sechium edule HOM05D007219 ORTHO05D008995 6.5e-73 278.1 174 77.6
Oeu029809.1 Olea europaea HOM05D007219 ORTHO05D008995 1.1e-72 277.3 184 71.7
ECA234G4660 Erigeron canadensis HOM05D007219 ORTHO05D008995 1.5e-72 276.9 188 73.4
Phvul.006G013300 Phaseolus vulgaris HOM05D007219 ORTHO05D008995 1.5e-72 276.9 195 68.7
Eucgr.K00659 Eucalyptus grandis HOM05D007219 ORTHO05D008995 1.9e-72 276.6 187 73.3
Aa31LG1G4150 Aethionema arabicum HOM05D002708 ORTHO05D003516 2.5e-72 276.2 189 70.9
AL3G42440 Arabidopsis lyrata HOM05D007219 ORTHO05D008995 2.5e-72 276.2 189 69.3
BolC3t17801H Brassica oleracea HOM05D007219 ORTHO05D008995 2.5e-72 276.2 195 67.7
TWI36G0002 Tripterygium wilfordii HOM05D007219 ORTHO05D008995 3.2e-72 275.8 186 72.6
Aqoxy1G04023 Aquilegia oxysepala HOM05D007219 ORTHO05D008995 7.2e-72 274.6 202 67.8
ATR0712G058 Amborella trichopoda HOM05D007219 ORTHO05D008995 2.1e-71 273.1 189 68.8
Lalb_Chr22g0360881 Lupinus albus HOM05D007219 ORTHO05D008995 3.6e-71 272.3 188 70.2
Carub.0003s2645 Capsella rubella HOM05D007219 ORTHO05D008995 4.7e-71 271.9 193 67.9
PGR142G0267 Punica granatum HOM05D007219 ORTHO05D008995 6.1e-71 271.6 192 70.3
Thhalv10002661m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 1.0e-70 270.8 193 68.4
arahy.Tifrunner.gnm1.ann1.N6EW4G Arachis hypogaea HOM05D007219 ORTHO05D008995 3.0e-70 269.2 183 69.9
PGSC0003DMG400020758 Solanum tuberosum HOM05D007219 ORTHO05D008995 4.0e-70 268.9 169 75.1
TPR.G19322 Trifolium pratense HOM05D007219 ORTHO05D008995 1.5e-69 266.9 189 68.3
EL10Ac9g22747 Beta vulgaris HOM05D007219 ORTHO05D008995 2.0e-69 266.5 193 70.5
Medtr3g083200 Medicago truncatula HOM05D007219 ORTHO05D008995 4.4e-69 265.4 183 69.9
Psat5g102680 Pisum sativum HOM05D007219 ORTHO05D008995 1.3e-68 263.8 187 69.0
CiPaw.03G278000 Carya illinoinensis HOM05D007219 ORTHO05D008995 2.2e-68 263.1 184 70.7
PSO302G0207 Papaver somniferum HOM05D007219 ORTHO05D008995 2.2e-68 263.1 180 71.1
CDE10G1006 Ceratophyllum demersum HOM05D007219 ORTHO05D008995 6.3e-68 261.5 172 73.3
Haze_12702 Corylus avellana HOM05D007219 ORTHO05D008995 6.3e-68 261.5 187 69.5
HPP92_020392 Vanilla planifolia HOM05D007219 ORTHO05D008995 3.1e-67 259.2 187 67.4
MELO3C024213.2 Cucumis melo HOM05D007219 ORTHO05D008995 1.6e-66 256.9 187 69.5
Actinidia07878 Actinidia chinensis HOM05D007219 ORTHO05D008995 2.0e-66 256.5 158 79.7
Duzib133G0547 Durio zibethinus HOM05D007219 ORTHO05D008995 5.9e-66 255.0 189 68.8
Os03g0194400 Oryza sativa ssp. japonica HOM05D007219 ORTHO05D008995 2.1e-63 246.5 176 68.8
Ciclev10016673m.g Citrus clementina HOM05D007219 ORTHO05D008995 2.3e-62 243.0 156 75.6
COL.COLO4_04268 Corchorus olitorius HOM05D007219 ORTHO05D008995 2.3e-62 243.0 150 78.7
Sabra14G0123400 Salix brachista HOM05D007219 ORTHO05D008995 6.8e-62 241.5 266 52.3
Dinv07849 Davidia involucrata HOM05D007219 ORTHO05D008995 4.4e-61 238.8 143 79.7
FAN05G4854 Fragaria x ananassa HOM05D007219 ORTHO05D008995 4.4e-61 238.8 190 66.3
MBI16_g42309_MAGBIO Magnolia biondii HOM05D007219 ORTHO05D008995 7.5e-61 238.0 170 70.0
SGA_v2.0_scaffold73G24522 Striga asiatica HOM05D007219 ORTHO05D008995 4.6e-58 228.8 169 68.6
QL08p028923 Quercus lobata HOM05D007219 ORTHO05D008995 2.3e-57 226.5 334 41.3
Ah.14g082820 Amaranthus hybridus HOM05D007219 ORTHO05D008995 1.2e-55 220.7 128 82.0
arahy.Tifrunner.gnm1.ann1.E78GDQ Arachis hypogaea HOM05D007219 ORTHO05D008995 3.6e-55 219.2 309 41.4
arahy.Tifrunner.gnm1.ann1.XZ9N91 Arachis hypogaea HOM05D007219 ORTHO05D008995 3.6e-55 219.2 309 41.4
Zm00001eb401150 Zea mays HOM05D007219 ORTHO05D008995 1.0e-54 217.6 150 67.3
AUR62015074 Chenopodium quinoa HOM05D007219 ORTHO05D008995 5.8e-53 211.8 129 79.8
Sc21g0000880 Simmondsia chinensis HOM05D007219 ORTHO05D008995 2.3e-49 199.9 111 84.7
SMO115G0308 Selaginella moellendorffii HOM05D007219 ORTHO05D008995 3.0e-49 199.5 167 57.5
FAN02G0754 Fragaria x ananassa HOM05D007219 ORTHO05D008995 6.6e-49 198.4 184 56.5
Mapoly0089s0028 Marchantia polymorpha HOM05D007219 ORTHO05D008995 2.0e-45 186.8 169 53.8
ClCG02G002620 Citrullus lanatus HOM05D007219 ORTHO05D008995 2.6e-45 186.4 128 71.9
VMungo0540G0477 Vigna mungo HOM05D007219 ORTHO05D008995 4.9e-44 182.2 188 52.7
Cfa014252 Carpinus fangiana HOM05D007219 ORTHO05D008995 1.0e-41 174.5 133 63.9
Ca_16365_v3 Cicer arietinum L. HOM05D007219 ORTHO05D008995 5.1e-41 172.2 121 70.2
MCO15G116 Micromonas commoda HOM05D007219 ORTHO05D008995 8.4e-36 154.8 171 48.5
Rhsim06G0172900 Rhododendron simsii HOM05D007219 ORTHO05D008995 4.1e-35 152.5 224 46.9
CBR_g31837 Chara braunii HOM05D007219 ORTHO05D008995 6.2e-31 138.7 290 32.8
Nitab4.5_0002877g0050 Nicotiana tabacum HOM05D007219 ORTHO05D008995 1.4e-30 137.5 86 77.9
SEGI_01956 Sequoiadendron giganteum HOM05D007219 ORTHO05D008995 3.8e-28 129.4 82 67.1
CSS0035148 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 4.8e-23 112.5 73 76.7
MD17G1111700 Malus domestica HOM05D007219 ORTHO05D008995 1.4e-22 110.9 122 52.5
PRCOL_00004041 Prasinoderma coloniale HOM05D007219 ORTHO05D008995 5.4e-19 99.0 170 35.9
Thhalv10003074m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 5.1e-17 92.4 108 51.9
AagrBONN_evm.TU.Sc2ySwM_362.1409 Anthoceros agrestis HOM05D007219 ORTHO05D008995 2.1e-15 87.0 129 40.3
Actinidia09773 Actinidia chinensis HOM05D007219 ORTHO05D008995 6.2e-15 85.5 55 70.9
MD17G1111600 Malus domestica HOM05D007219 ORTHO05D008995 6.2e-15 85.5 62 67.7
Cre03.g184151 Chlamydomonas reinhardtii HOM05D007219 ORTHO05D008995 4.2e-11 72.8 115 40.0
CSS0021882 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.5e-08 64.3 34 76.5
CSS0030489 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 1.9e-08 63.9 36 72.2
Oeu027288.1 Olea europaea HOM05D007219 ORTHO05D008995 4.3e-08 62.8 49 61.2


User provided reference genes

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