Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund23960 Selenicereus undatus HOM05D000566 ORTHO05D008456 8.1e-106 387.1 198 100.0
Sc05g0007190 Simmondsia chinensis HOM05D000566 ORTHO05D008456 7.6e-64 247.7 201 67.2
TWI38G1860 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 2.9e-63 245.7 200 69.0
FAN25G1525 Fragaria x ananassa HOM05D000566 ORTHO05D000686 3.8e-63 245.4 150 83.3
CANSAT35G0195 Cannabis sativa HOM05D000566 ORTHO05D008456 1.1e-62 243.8 203 68.5
Rhsim13G0191700 Rhododendron simsii HOM05D000566 ORTHO05D000686 2.5e-62 242.7 188 68.6
RcHm_v2.0_Chr5g0010321 Rosa chinensis HOM05D000566 ORTHO05D008456 2.5e-62 242.7 193 66.3
FAN11G2813 Fragaria x ananassa HOM05D000566 ORTHO05D008456 3.2e-62 242.3 150 82.0
FAN21G0306 Fragaria x ananassa HOM05D000566 ORTHO05D008456 5.5e-62 241.5 200 68.0
MELO3C007220.2 Cucumis melo HOM05D000566 ORTHO05D008456 7.1e-62 241.1 199 69.8
TPR.G16280 Trifolium pratense HOM05D000566 ORTHO05D008456 7.1e-62 241.1 201 69.2
TAR626G0526 Trochodendron aralioides HOM05D000566 ORTHO05D008456 1.6e-61 240.0 203 67.0
FvH4_3g07991 Fragaria vesca HOM05D000566 ORTHO05D008456 2.7e-61 239.2 200 67.5
Ah.09g233690 Amaranthus hybridus HOM05D000566 ORTHO05D008456 3.5e-61 238.8 190 72.1
COL.COLO4_31322 Corchorus olitorius HOM05D000566 ORTHO05D000686 3.5e-61 238.8 186 69.9
Lj4g0018718 Lotus japonicus HOM05D000566 ORTHO05D008456 3.5e-61 238.8 170 75.3
Ciclev10016472m.g Citrus clementina HOM05D000566 ORTHO05D008456 4.6e-61 238.4 205 70.7
Duzib192G0190 Durio zibethinus HOM05D000566 ORTHO05D008456 6.0e-61 238.0 153 79.7
Thecc.06G173200 Theobroma cacao HOM05D000566 ORTHO05D008456 6.0e-61 238.0 186 71.5
vmacro03936 Vaccinium macrocarpon HOM05D000566 ORTHO05D008456 7.9e-61 237.7 187 70.1
Glyma.13G171000 Glycine max HOM05D000566 ORTHO05D008456 1.0e-60 237.3 155 80.0
Potri.011G064600 Populus trichocarpa HOM05D000566 ORTHO05D008456 1.8e-60 236.5 152 79.6
Prupe.4G059300 Prunus persica HOM05D000566 ORTHO05D008456 1.8e-60 236.5 194 64.9
AUR62036584 Chenopodium quinoa HOM05D000566 ORTHO05D008456 2.3e-60 236.1 138 86.2
Gohir.A06G134006 Gossypium hirsutum HOM05D000566 ORTHO05D008456 3.9e-60 235.3 194 68.0
ClCG01G023650 Citrullus lanatus HOM05D000566 ORTHO05D008456 5.1e-60 235.0 184 70.1
Dinv04627 Davidia involucrata HOM05D000566 ORTHO05D008456 5.1e-60 235.0 154 80.5
Atru.chr10.1700 Acer truncatum HOM05D000566 ORTHO05D008456 1.5e-59 233.4 197 65.5
Eucgr.E02712 Eucalyptus grandis HOM05D000566 ORTHO05D008456 1.9e-59 233.0 155 80.0
Lalb_Chr16g0384251 Lupinus albus HOM05D000566 ORTHO05D008456 1.9e-59 233.0 146 82.9
Cfa000591 Carpinus fangiana HOM05D000566 ORTHO05D008456 4.3e-59 231.9 176 71.0
QL05p046292 Quercus lobata HOM05D000566 ORTHO05D008456 4.3e-59 231.9 121 93.4
Gohir.D06G136400 Gossypium hirsutum HOM05D000566 ORTHO05D008456 5.7e-59 231.5 195 68.2
EL10Ac8g20507 Beta vulgaris HOM05D000566 ORTHO05D008456 7.4e-59 231.1 239 59.0
Gorai.010G158600 Gossypium raimondii HOM05D000566 ORTHO05D008456 7.4e-59 231.1 154 78.6
Lalb_Chr05g0218771 Lupinus albus HOM05D000566 ORTHO05D008456 7.4e-59 231.1 187 69.5
Phvul.003G058300 Phaseolus vulgaris HOM05D000566 ORTHO05D008456 7.4e-59 231.1 156 75.0
Psat7g118880 Pisum sativum HOM05D000566 ORTHO05D008456 9.6e-59 230.7 203 68.0
Hma1.2p1_0437F.1_g152980 Hydrangea macrophylla HOM05D000566 ORTHO05D008456 1.6e-58 229.9 209 64.6
GSVIVG01021190001 Vitis vinifera HOM05D000566 ORTHO05D008456 1.6e-58 229.9 122 91.8
Manes.16G037200 Manihot esculenta HOM05D000566 ORTHO05D008456 2.1e-58 229.6 204 63.7
Actinidia16807 Actinidia chinensis HOM05D000566 ORTHO05D008456 3.7e-58 228.8 122 91.0
Ca_26053_v3 Cicer arietinum L. HOM05D000566 ORTHO05D008456 3.7e-58 228.8 126 89.7
Cc02_g14640 Coffea canephora HOM05D000566 ORTHO05D008456 3.7e-58 228.8 122 91.8
MD10G1282600 Malus domestica HOM05D000566 ORTHO05D008456 3.7e-58 228.8 194 67.0
Medtr4g087750 Medicago truncatula HOM05D000566 ORTHO05D008456 3.7e-58 228.8 193 66.3
THA.LOC104814247 Tarenaya hassleriana HOM05D000566 ORTHO05D008456 3.7e-58 228.8 176 68.8
Sed0006380 Sechium edule HOM05D000566 ORTHO05D008456 6.3e-58 228.0 158 75.9
Sp1g24970 Schrenkiella parvula HOM05D000566 ORTHO05D008456 1.1e-57 227.3 177 65.0
MSTRG.7396 Avicennia marina HOM05D000566 ORTHO05D008456 1.8e-57 226.5 203 65.5
Oeu039926.1 Olea europaea HOM05D000566 ORTHO05D008456 1.8e-57 226.5 137 83.2
CiPaw.09G068300 Carya illinoinensis HOM05D000566 ORTHO05D008456 2.4e-57 226.1 193 67.4
SGA_v2.0_scaffold1G00030 Striga asiatica HOM05D000566 ORTHO05D008456 2.4e-57 226.1 167 71.9
Aqoxy1G03201 Aquilegia oxysepala HOM05D000566 ORTHO05D008456 3.1e-57 225.7 122 88.5
Haze_06259 Corylus avellana HOM05D000566 ORTHO05D008456 3.1e-57 225.7 181 69.1
Migut.M01050 Erythranthe guttata HOM05D000566 ORTHO05D008456 3.1e-57 225.7 176 68.8
AT1G29040 Arabidopsis thaliana HOM05D000566 ORTHO05D008456 4.1e-57 225.3 184 65.2
PSO675G8854 Papaver somniferum HOM05D000566 ORTHO05D008456 4.1e-57 225.3 188 67.0
PGR042G3563 Punica granatum HOM05D000566 ORTHO05D008456 4.1e-57 225.3 152 75.7
Sabra11G0046400 Salix brachista HOM05D000566 ORTHO05D008456 4.1e-57 225.3 164 70.7
PSO541G3700 Papaver somniferum HOM05D000566 ORTHO05D008456 5.3e-57 224.9 139 79.9
VMungo0251G1655 Vigna mungo HOM05D000566 ORTHO05D008456 6.9e-57 224.6 155 76.1
HanXRQChr07g0186931 Helianthus annuus HOM05D000566 ORTHO05D008456 1.2e-56 223.8 139 79.9
Peaxi162Scf01479g00012 Petunia axillaris HOM05D000566 ORTHO05D008456 1.2e-56 223.8 137 81.0
SalBow8G0706 Salvia bowleyana HOM05D000566 ORTHO05D008456 3.4e-56 222.2 177 69.5
PGSC0003DMG401022314 Solanum tuberosum HOM05D000566 ORTHO05D008456 3.4e-56 222.2 122 87.7
CAN.G337.143 Capsicum annuum HOM05D000566 ORTHO05D008456 7.6e-56 221.1 122 88.5
DCAR_004017 Daucus carota HOM05D000566 ORTHO05D008456 7.6e-56 221.1 179 65.4
Lsat_1_v5_gn_4_50020 Lactuca sativa HOM05D000566 ORTHO05D008456 1.0e-55 220.7 206 61.7
ECA234G0195 Erigeron canadensis HOM05D000566 ORTHO05D000686 1.3e-55 220.3 147 76.2
unitig_699.g19342 Utricularia gibba HOM05D000566 ORTHO05D008456 1.7e-55 219.9 148 76.4
Sopen07g032890 Solanum pennellii HOM05D000566 ORTHO05D008456 2.2e-55 219.5 122 86.9
Solyc07g064690.1 Solanum lycopersicum HOM05D000566 ORTHO05D008456 2.9e-55 219.2 122 86.9
Medtr4g087740 Medicago truncatula HOM05D000566 ORTHO05D008456 5.0e-55 218.4 129 85.3
CDE02G2902 Ceratophyllum demersum HOM05D000566 ORTHO05D008456 8.4e-55 217.6 122 88.5
CARHR028250 Cardamine hirsuta HOM05D000566 ORTHO05D008456 1.1e-54 217.2 156 69.9
A07p11000 Brassica napus HOM05D000566 ORTHO05D008456 1.9e-54 216.5 179 63.1
BraA07t28892Z Brassica rapa HOM05D000566 ORTHO05D008456 1.9e-54 216.5 179 63.1
Thhalv10009067m.g Eutrema salsugineum HOM05D000566 ORTHO05D008456 2.5e-54 216.1 122 84.4
Carub.0001s2723 Capsella rubella HOM05D000566 ORTHO05D008456 2.7e-53 212.6 122 82.8
BcaC06g35392 Brassica carinata HOM05D000566 ORTHO05D008456 3.5e-53 212.2 172 65.1
MBI06_g25985_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 3.5e-53 212.2 163 69.9
AL1G42750 Arabidopsis lyrata HOM05D000566 ORTHO05D008456 6.1e-53 211.5 122 82.0
BcaB03g13911 Brassica carinata HOM05D000566 ORTHO05D008456 6.1e-53 211.5 171 66.1
Os01g0613300 Oryza sativa ssp. japonica HOM05D000566 ORTHO05D008456 6.1e-53 211.5 146 72.6
HPP92_024140 Vanilla planifolia HOM05D000566 ORTHO05D008456 1.0e-52 210.7 122 85.2
C07p16640 Brassica napus HOM05D000566 ORTHO05D008456 1.8e-52 209.9 172 63.4
BolC7t42164H Brassica oleracea HOM05D000566 ORTHO05D008456 5.1e-52 208.4 172 64.5
Lj2A297T108 Lonicera japonica HOM05D000566 ORTHO05D008456 6.7e-52 208.0 187 60.4
Nitab4.5_0000206g0050 Nicotiana tabacum HOM05D000566 ORTHO05D008456 8.7e-52 207.6 137 77.4
Pp3c24_14610 Physcomitrium patens HOM05D000566 ORTHO05D008456 2.5e-51 206.1 181 59.7
Zm00001eb162000 Zea mays HOM05D000566 ORTHO05D008456 3.3e-51 205.7 194 60.8
Pp3c23_18520 Physcomitrium patens HOM05D000566 ORTHO05D008456 7.4e-51 204.5 134 71.6
Glyma.13G170900 Glycine max HOM05D000566 ORTHO05D008456 1.4e-49 200.3 127 77.2
Peaxi162Scf01070g00226 Petunia axillaris HOM05D000566 ORTHO05D008456 1.8e-49 199.9 188 59.0
Aa31LG6G11510 Aethionema arabicum HOM05D000566 ORTHO05D008456 7.7e-48 194.5 181 60.2
AUR62031167 Chenopodium quinoa HOM05D000566 ORTHO05D008456 7.7e-48 194.5 99 97.0
VMungo0251G1536 Vigna mungo HOM05D000566 ORTHO05D008456 6.5e-47 191.4 135 68.9
ATR0602G168 Amborella trichopoda HOM05D000566 ORTHO05D008456 1.1e-46 190.7 146 69.2
arahy.Tifrunner.gnm1.ann1.AZL87G Arachis hypogaea HOM05D000566 ORTHO05D008456 2.1e-45 186.4 122 72.1
Glyma.04G136400 Glycine max HOM05D000566 ORTHO05D008456 2.7e-45 186.0 122 73.0
arahy.Tifrunner.gnm1.ann1.441UHN Arachis hypogaea HOM05D000566 ORTHO05D008456 4.6e-45 185.3 122 71.3
SEGI_28108 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 8.2e-42 174.5 122 67.2
AagrBONN_evm.TU.Sc2ySwM_344.3192 Anthoceros agrestis HOM05D000566 ORTHO05D008456 6.5e-39 164.9 106 73.6
CsaV3_6G050800 Cucumis sativus L. HOM05D000566 ORTHO05D008456 3.9e-36 155.6 165 59.4
Cpa.g.sc7.62 Carica papaya HOM05D000566 ORTHO05D008456 1.1e-33 147.5 146 61.6
FAN16G3553 Fragaria x ananassa HOM05D000566 ORTHO05D008456 1.8e-33 146.7 150 59.3
Nn1g04373 Nelumbo nucifera HOM05D000566 ORTHO05D008456 2.4e-33 146.4 126 65.9
Nitab4.5_0010317g0010 Nicotiana tabacum HOM05D000566 ORTHO05D008456 2.7e-29 132.9 81 81.5
TWI38G1453 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 1.0e-28 131.0 130 57.7
MCO02G300 Micromonas commoda HOM05D000566 ORTHO05D008456 9.7e-27 124.4 120 54.2
TWI38G2220 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 2.7e-21 106.3 150 47.3
PRCOL_00004523 Prasinoderma coloniale HOM05D000566 ORTHO05D008456 4.7e-21 105.5 119 47.9
Glyma.04G136500 Glycine max HOM05D000566 ORTHO05D008456 1.4e-20 104.0 71 70.4
CSS0020746 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 9.1e-17 91.3 123 52.0
CSS0029795 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 9.1e-17 91.3 123 52.0
CSS0045665 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 3.8e-15 85.9 45 88.9
SEGI_06418 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 6.5e-15 85.1 70 67.1
SEGI_18524 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 3.2e-14 82.8 42 95.2
Sed0003601 Sechium edule HOM05D000566 ORTHO05D008456 2.3e-12 76.6 113 44.2
Cpa.g.sc7.61 Carica papaya HOM05D000566 ORTHO05D008456 5.2e-12 75.5 37 91.9
SEGI_34869 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 5.9e-08 62.0 42 64.3
MBI06_g25984_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 1.1e-06 57.8 52 57.7


User provided reference genes

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