Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund23711 Selenicereus undatus HOM05D001115 ORTHO05D001023 2.5e-116 422.2 215 100.0
EL10Ac8g20362 Beta vulgaris HOM05D001115 ORTHO05D001023 3.0e-29 132.9 193 42.0
Ah.14g089370 Amaranthus hybridus HOM05D001115 ORTHO05D001023 8.7e-21 104.8 204 39.7
Sc19g0002640 Simmondsia chinensis HOM05D001115 ORTHO05D001023 1.9e-20 103.6 202 37.1
GSVIVG01002019001 Vitis vinifera HOM05D001115 ORTHO05D001023 1.7e-16 90.5 212 34.4
Potri.011G050900 Populus trichocarpa HOM05D001115 ORTHO05D001023 8.4e-16 88.2 202 33.7
Actinidia39455 Actinidia chinensis HOM05D001115 ORTHO05D001023 2.4e-15 86.7 193 33.7
TWI38G2403 Tripterygium wilfordii HOM05D001115 ORTHO05D001023 3.2e-15 86.3 200 30.5
CSS0027947 Camellia sinensis var. sinensis HOM05D001115 ORTHO05D001023 9.3e-15 84.7 215 31.2
TAR626G1725 Trochodendron aralioides HOM05D001115 ORTHO05D001023 9.3e-15 84.7 205 34.1
Ciclev10016622m.g Citrus clementina HOM05D001115 ORTHO05D001023 1.2e-14 84.3 205 33.2
Manes.16G026100 Manihot esculenta HOM05D001115 ORTHO05D001023 1.6e-14 84.0 203 32.0
PGR004G1130 Punica granatum HOM05D001115 ORTHO05D001023 3.5e-14 82.8 197 32.0
MBI17_g43193_MAGBIO Magnolia biondii HOM05D001115 ORTHO05D001023 1.0e-13 81.3 204 33.8
Nn1g06594 Nelumbo nucifera HOM05D001115 ORTHO05D001023 1.0e-13 81.3 202 35.1
Rhsim02G0127800 Rhododendron simsii HOM05D001115 ORTHO05D001023 1.0e-13 81.3 218 29.8
Actinidia01888 Actinidia chinensis HOM05D001115 ORTHO05D001023 1.3e-13 80.9 200 33.0
TAR624G0150 Trochodendron aralioides HOM05D001115 ORTHO05D001023 1.3e-13 80.9 208 31.7
Dinv07543 Davidia involucrata HOM05D001115 ORTHO05D001023 2.3e-13 80.1 203 32.5
vmacro15899 Vaccinium macrocarpon HOM05D001115 ORTHO05D001023 2.3e-13 80.1 199 33.2
CSS0001393 Camellia sinensis var. sinensis HOM05D001115 ORTHO05D001023 3.0e-13 79.7 221 31.7
Gohir.D10G025300 Gossypium hirsutum HOM05D001115 ORTHO05D001023 3.0e-13 79.7 215 34.0
Gorai.011G026600 Gossypium raimondii HOM05D001115 ORTHO05D001023 1.5e-12 77.4 215 33.5
GSVIVG01030374001 Vitis vinifera HOM05D001115 ORTHO05D001023 1.5e-12 77.4 205 29.8
Actinidia05619 Actinidia chinensis HOM05D001115 ORTHO05D001023 1.9e-12 77.0 200 33.0
Gohir.A10G024600 Gossypium hirsutum HOM05D001115 ORTHO05D001023 1.9e-12 77.0 215 33.5
CiPaw.09G058100 Carya illinoinensis HOM05D001115 ORTHO05D001023 2.5e-12 76.6 196 34.7
Actinidia07579 Actinidia chinensis HOM05D001115 ORTHO05D001023 4.3e-12 75.9 197 31.0
Atru.chr10.1912 Acer truncatum HOM05D001115 ORTHO05D001023 7.4e-12 75.1 205 30.7
Cpa.g.sc27.59 Carica papaya HOM05D001115 ORTHO05D001023 7.4e-12 75.1 192 33.9
DCAR_004081 Daucus carota HOM05D001115 ORTHO05D001023 9.6e-12 74.7 203 31.0
Eucgr.D00635 Eucalyptus grandis HOM05D001115 ORTHO05D001023 1.3e-11 74.3 199 30.2
Sabra11G0034900 Salix brachista HOM05D001115 ORTHO05D001023 1.3e-11 74.3 207 31.9
CiPaw.10G047300 Carya illinoinensis HOM05D001115 ORTHO05D001023 2.1e-11 73.6 194 34.5
RcHm_v2.0_Chr5g0008101 Rosa chinensis HOM05D001115 ORTHO05D001023 2.1e-11 73.6 199 29.6
Lj2A287T55 Lonicera japonica HOM05D001115 ORTHO05D001023 2.8e-11 73.2 203 32.5
HPP92_021013 Vanilla planifolia HOM05D001115 ORTHO05D001023 2.8e-11 73.2 201 29.9
QL05p039812 Quercus lobata HOM05D001115 ORTHO05D001023 3.6e-11 72.8 212 30.2
Duzib160G0769 Durio zibethinus HOM05D001115 ORTHO05D001023 8.1e-11 71.6 205 31.2
CANSAT78G1646 Cannabis sativa HOM05D001115 ORTHO05D001023 1.1e-10 71.2 209 27.3
Rhsim10G0080900 Rhododendron simsii HOM05D001115 ORTHO05D001023 1.1e-10 71.2 196 32.7
CiPaw.04G125100 Carya illinoinensis HOM05D001115 ORTHO05D001023 1.4e-10 70.9 204 30.4
RhsimUnG0054000 Rhododendron simsii HOM05D001115 ORTHO05D001023 1.4e-10 70.9 198 32.8
Duzib235G0287 Durio zibethinus HOM05D001115 ORTHO05D001023 1.8e-10 70.5 219 28.3
Ca_25914_v3 Cicer arietinum L. HOM05D001115 ORTHO05D001023 2.4e-10 70.1 191 27.7
TPR.G21758 Trifolium pratense HOM05D001115 ORTHO05D001023 4.0e-10 69.3 199 28.6
FvH4_3g04940 Fragaria vesca HOM05D001115 ORTHO05D001023 5.3e-10 68.9 192 29.7
Prupe.3G155500 Prunus persica HOM05D001115 ORTHO05D001023 5.3e-10 68.9 195 28.2
MD17G1242500 Malus domestica HOM05D001115 ORTHO05D001023 6.9e-10 68.6 202 29.7
SGA_v2.0_scaffold109G31116 Striga asiatica HOM05D001115 ORTHO05D001023 6.9e-10 68.6 196 30.6
Lalb_Chr19g0135301 Lupinus albus HOM05D001115 ORTHO05D001023 9.0e-10 68.2 201 26.9
Nitab4.5_0002158g0030 Nicotiana tabacum HOM05D001115 ORTHO05D001023 9.0e-10 68.2 199 30.2
MSTRG.12313 Avicennia marina HOM05D001115 ORTHO05D001023 1.5e-09 67.4 199 30.7
Duzib248G1488 Durio zibethinus HOM05D001115 ORTHO05D001023 2.0e-09 67.0 210 27.1
Nn1g04044 Nelumbo nucifera HOM05D001115 ORTHO05D001023 2.0e-09 67.0 167 33.5
Oeu058381.1 Olea europaea HOM05D001115 ORTHO05D001023 2.0e-09 67.0 197 29.4
Os04g0679900 Oryza sativa ssp. japonica HOM05D001115 ORTHO05D001023 2.0e-09 67.0 189 29.6
FAN11G0571 Fragaria x ananassa HOM05D001115 ORTHO05D001023 2.6e-09 66.6 192 29.7
Prupe.4G044700 Prunus persica HOM05D001115 ORTHO05D001023 2.6e-09 66.6 185 29.7
Rhsim13G0176600 Rhododendron simsii HOM05D001115 ORTHO05D001023 2.6e-09 66.6 243 29.6
Atru.chr6.3006 Acer truncatum HOM05D001115 ORTHO05D001023 3.4e-09 66.2 224 26.8
MD10G1295800 Malus domestica HOM05D001115 ORTHO05D001023 3.4e-09 66.2 207 30.9
RcHm_v2.0_Chr2g0126211 Rosa chinensis HOM05D001115 ORTHO05D001023 3.4e-09 66.2 204 30.9
Actinidia09860 Actinidia chinensis HOM05D001115 ORTHO05D001023 4.5e-09 65.9 205 29.8
FAN16G2292 Fragaria x ananassa HOM05D001115 ORTHO05D001023 4.5e-09 65.9 192 28.6
FAN21G2614 Fragaria x ananassa HOM05D001115 ORTHO05D001023 4.5e-09 65.9 192 28.6
FAN25G2831 Fragaria x ananassa HOM05D001115 ORTHO05D001023 4.5e-09 65.9 192 28.6
Glyma.12G111700 Glycine max HOM05D001115 ORTHO05D001023 4.5e-09 65.9 185 27.0
Lj3g0023189 Lotus japonicus HOM05D001115 ORTHO05D001023 4.5e-09 65.9 201 27.9
Glyma.06G293700 Glycine max HOM05D001115 ORTHO05D001023 5.8e-09 65.5 185 27.0
Manes.13G147500 Manihot esculenta HOM05D001115 ORTHO05D001023 5.8e-09 65.5 209 27.8
Sabra13G0114000 Salix brachista HOM05D000383 ORTHO05D000730 5.8e-09 65.5 204 28.4
Oeu017970.1 Olea europaea HOM05D001115 ORTHO05D001023 7.6e-09 65.1 207 29.5
CAN.G1164.11 Capsicum annuum HOM05D001115 ORTHO05D001023 9.9e-09 64.7 205 29.8
Solyc02g078450.3 Solanum lycopersicum HOM05D001115 ORTHO05D001023 9.9e-09 64.7 204 28.9
Sopen07g028090 Solanum pennellii HOM05D001115 ORTHO05D001023 9.9e-09 64.7 207 28.0
CARHR111410 Cardamine hirsuta HOM05D001115 ORTHO05D001023 1.3e-08 64.3 199 27.6
Hma1.2p1_1201F.1_g266710 Hydrangea macrophylla HOM05D001115 ORTHO05D001023 1.3e-08 64.3 203 30.0
VMungo1127G0219 Vigna mungo HOM05D001115 ORTHO05D001023 1.3e-08 64.3 186 26.9
C07p00170 Brassica napus HOM05D001115 ORTHO05D001023 1.7e-08 63.9 201 26.9
BolC7t40468H Brassica oleracea HOM05D001115 ORTHO05D001023 1.7e-08 63.9 201 26.9
Cpa.g.sc34.143 Carica papaya HOM05D001115 ORTHO05D001023 1.7e-08 63.9 200 27.5
CsaV3_6G013010 Cucumis sativus L. HOM05D007014 ORTHO05D008894 1.7e-08 63.9 207 26.6
Phvul.011G117300 Phaseolus vulgaris HOM05D001115 ORTHO05D001023 1.7e-08 63.9 187 27.3
Potri.013G134200 Populus trichocarpa HOM05D001115 ORTHO05D001023 1.7e-08 63.9 206 27.7
Solyc07g054160.3 Solanum lycopersicum HOM05D001115 ORTHO05D001023 1.7e-08 63.9 207 27.5
Actinidia11044 Actinidia chinensis HOM05D001115 ORTHO05D001023 2.9e-08 63.2 212 27.8
PGSC0003DMG400018311 Solanum tuberosum HOM05D001115 ORTHO05D001023 2.9e-08 63.2 207 28.5
PGSC0003DMG400022440 Solanum tuberosum HOM05D001115 ORTHO05D001023 3.8e-08 62.8 215 27.9
Zm00001eb065970 Zea mays HOM05D001115 ORTHO05D001023 3.8e-08 62.8 188 29.8
arahy.Tifrunner.gnm1.ann1.2K180M Arachis hypogaea HOM05D001115 ORTHO05D001023 4.9e-08 62.4 188 25.0
Sopen02g023300 Solanum pennellii HOM05D001115 ORTHO05D001023 4.9e-08 62.4 204 28.9
AL3G53850 Arabidopsis lyrata HOM05D001115 ORTHO05D001023 6.4e-08 62.0 208 26.4
CSS0040668 Camellia sinensis var. sinensis HOM05D001115 ORTHO05D001023 6.4e-08 62.0 210 28.6
CANSAT35G1125 Cannabis sativa HOM05D001115 ORTHO05D001023 6.4e-08 62.0 205 25.4
ATR0680G167 Amborella trichopoda HOM05D001115 ORTHO05D001023 8.4e-08 61.6 185 30.3
arahy.Tifrunner.gnm1.ann1.ALBM4S Arachis hypogaea HOM05D001115 ORTHO05D001023 8.4e-08 61.6 157 24.8
Carub.0003s3526 Capsella rubella HOM05D001115 ORTHO05D001023 8.4e-08 61.6 208 26.4
CiPaw.03G175400 Carya illinoinensis HOM05D001115 ORTHO05D001023 8.4e-08 61.6 198 28.3
Peaxi162Scf00132g00422 Petunia axillaris HOM05D001115 ORTHO05D001023 8.4e-08 61.6 206 30.1
Actinidia12267 Actinidia chinensis HOM05D001115 ORTHO05D001023 1.1e-07 61.2 199 27.1
Migut.H01075 Erythranthe guttata HOM05D001115 ORTHO05D001023 1.1e-07 61.2 191 28.8
AT2G20740 Arabidopsis thaliana HOM05D001115 ORTHO05D001023 1.4e-07 60.8 209 26.3
arahy.Tifrunner.gnm1.ann1.E3DXNV Arachis hypogaea HOM05D001115 ORTHO05D001023 1.9e-07 60.5 161 29.2
Potri.019G101800 Populus trichocarpa HOM05D001115 ORTHO05D001023 1.9e-07 60.5 202 25.7
Cc02_g13180 Coffea canephora HOM05D001115 ORTHO05D001023 2.4e-07 60.1 208 25.5
COL.COLO4_07553 Corchorus olitorius HOM05D001115 ORTHO05D001023 2.4e-07 60.1 206 25.7
Sp3g33990 Schrenkiella parvula HOM05D001115 ORTHO05D001023 2.4e-07 60.1 203 26.6
Nitab4.5_0002526g0050 Nicotiana tabacum HOM05D001115 ORTHO05D001023 3.2e-07 59.7 204 26.0
QL08p038410 Quercus lobata HOM05D001115 ORTHO05D001023 3.2e-07 59.7 191 26.7
BcaC06g36765 Brassica carinata HOM05D001115 ORTHO05D001023 4.2e-07 59.3 201 26.4
A07p00030 Brassica napus HOM05D001115 ORTHO05D001023 4.2e-07 59.3 200 27.0
BraA07t27795Z Brassica rapa HOM05D001115 ORTHO05D001023 4.2e-07 59.3 200 27.0
CAN.G248.20 Capsicum annuum HOM05D001115 ORTHO05D001023 7.1e-07 58.5 224 25.0
Duzib052G0128 Durio zibethinus HOM05D001115 ORTHO05D001023 7.1e-07 58.5 209 25.8
FvH4_6g26130 Fragaria vesca HOM05D001115 ORTHO05D001023 7.1e-07 58.5 208 28.8
PGR042G0194 Punica granatum HOM05D001115 ORTHO05D001023 9.3e-07 58.2 189 27.5
Thecc.06G190000 Theobroma cacao HOM05D001115 ORTHO05D001023 9.3e-07 58.2 143 31.5
vmacro09277 Vaccinium macrocarpon HOM05D001115 ORTHO05D001023 9.3e-07 58.2 212 27.8
Thhalv10002095m.g Eutrema salsugineum HOM05D001115 ORTHO05D001023 1.6e-06 57.4 207 26.1
HanXRQChr17g0553551 Helianthus annuus HOM05D001115 ORTHO05D001023 2.7e-06 56.6 135 31.1
Nitab4.5_0000512g0160 Nicotiana tabacum HOM05D001115 ORTHO05D001023 3.5e-06 56.2 204 26.5
Rhsim04G0067900 Rhododendron simsii HOM05D001115 ORTHO05D001023 7.9e-06 55.1 148 31.1
RhsimUnG0037000 Rhododendron simsii HOM05D001115 ORTHO05D001023 7.9e-06 55.1 148 31.1


User provided reference genes

Program Settings