Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund23620 Selenicereus undatus HOM05D004656 ORTHO05D005404 7.9e-58 226.9 113 100.0
EL10Ac8g20612 Beta vulgaris HOM05D004656 ORTHO05D005404 3.5e-37 158.3 86 88.4
AUR62016904 Chenopodium quinoa HOM05D004656 ORTHO05D005404 4.5e-37 157.9 86 88.4
AUR62014723 Chenopodium quinoa HOM05D004656 ORTHO05D005404 1.5e-35 152.9 86 86.0
Sc17g0006590 Simmondsia chinensis HOM05D004656 ORTHO05D005404 3.6e-34 148.3 109 69.7
ClCG01G022700 Citrullus lanatus HOM05D004656 ORTHO05D005404 1.5e-32 142.9 86 80.2
DCAR_004136 Daucus carota HOM05D004656 ORTHO05D005404 5.7e-32 141.0 86 77.9
MD10G1303000 Malus domestica HOM05D004656 ORTHO05D005404 5.7e-32 141.0 86 77.9
QL03p053091 Quercus lobata HOM05D004656 ORTHO05D005404 5.7e-32 141.0 86 77.9
QL05p081970 Quercus lobata HOM05D004656 ORTHO05D005404 5.7e-32 141.0 86 77.9
Dinv39815 Davidia involucrata HOM05D004656 ORTHO05D005404 9.8e-32 140.2 86 76.7
Lj2A281G21 Lonicera japonica HOM05D004656 ORTHO05D005404 1.3e-31 139.8 86 76.7
vmacro03819 Vaccinium macrocarpon HOM05D004656 ORTHO05D005404 1.3e-31 139.8 86 76.7
CSS0039613 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 1.7e-31 139.4 86 76.7
Prupe.4G036500 Prunus persica HOM05D004656 ORTHO05D005404 1.7e-31 139.4 86 76.7
Hma1.2p1_1241F.1_g269840 Hydrangea macrophylla HOM05D004656 ORTHO05D005404 2.2e-31 139.0 85 76.5
SalBow7G0885 Salvia bowleyana HOM05D004656 ORTHO05D005404 2.8e-31 138.7 86 75.6
THA.LOC104812734 Tarenaya hassleriana HOM05D004656 ORTHO05D005404 2.8e-31 138.7 86 75.6
RcHm_v2.0_Chr5g0006531 Rosa chinensis HOM05D004656 ORTHO05D005404 3.7e-31 138.3 86 76.7
Cpa.g.sc27.117 Carica papaya HOM05D004656 ORTHO05D005404 4.9e-31 137.9 86 75.6
Aa31LG6G3550 Aethionema arabicum HOM05D004656 ORTHO05D005404 6.3e-31 137.5 86 74.4
SalBow7G0840 Salvia bowleyana HOM05D004656 ORTHO05D005404 6.3e-31 137.5 86 74.4
MELO3C025319.2 Cucumis melo HOM05D004656 ORTHO05D005404 8.3e-31 137.1 86 76.7
Duzib160G0757 Durio zibethinus HOM05D004656 ORTHO05D005404 8.3e-31 137.1 86 75.6
Nn2g12691 Nelumbo nucifera HOM05D004656 ORTHO05D005404 8.3e-31 137.1 86 74.4
GSVIVG01003202001 Vitis vinifera HOM05D004656 ORTHO05D005404 8.3e-31 137.1 86 76.7
Atru.chr10.2003 Acer truncatum HOM05D004656 ORTHO05D005404 1.1e-30 136.7 86 75.6
Ciclev10014364m.g Citrus clementina HOM05D004656 ORTHO05D005404 1.1e-30 136.7 109 66.1
Lj4g0008048 Lotus japonicus HOM05D004656 ORTHO05D005404 1.1e-30 136.7 86 72.1
Haze_06568 Corylus avellana HOM05D004656 ORTHO05D005404 1.4e-30 136.3 86 77.9
Migut.E00415 Erythranthe guttata HOM05D004656 ORTHO05D005404 1.4e-30 136.3 86 75.6
Sed0019970 Sechium edule HOM05D004656 ORTHO05D005404 1.4e-30 136.3 86 76.7
CiPaw.09G158300 Carya illinoinensis HOM05D004656 ORTHO05D005404 1.8e-30 136.0 86 75.6
Gohir.A10G020800 Gossypium hirsutum HOM05D004656 ORTHO05D005404 1.8e-30 136.0 86 74.4
Gorai.011G022700 Gossypium raimondii HOM05D004656 ORTHO05D005404 1.8e-30 136.0 86 74.4
Glyma.07G190600 Glycine max HOM05D004656 ORTHO05D005404 2.4e-30 135.6 86 73.3
GSVIVG01003206001 Vitis vinifera HOM05D004656 ORTHO05D005404 2.4e-30 135.6 86 75.6
CsaV3_1G030810 Cucumis sativus L. HOM05D004656 ORTHO05D005404 3.1e-30 135.2 86 75.6
CARHR228190 Cardamine hirsuta HOM05D004656 ORTHO05D005404 4.1e-30 134.8 86 72.1
Cfa000358 Carpinus fangiana HOM05D004656 ORTHO05D005404 4.1e-30 134.8 86 76.7
COL.COLO4_31575 Corchorus olitorius HOM05D004656 ORTHO05D005404 4.1e-30 134.8 86 73.3
FvH4_3g04050 Fragaria vesca HOM05D004656 ORTHO05D005404 4.1e-30 134.8 86 75.6
FAN11G0019 Fragaria x ananassa HOM05D004656 ORTHO05D005404 4.1e-30 134.8 86 75.6
FAN25G3623 Fragaria x ananassa HOM05D004656 ORTHO05D005404 4.1e-30 134.8 86 75.6
unitig_8.g3352 Utricularia gibba HOM05D004656 ORTHO05D005404 4.1e-30 134.8 86 72.1
Sopen02g023860 Solanum pennellii HOM05D004656 ORTHO05D005404 5.4e-30 134.4 86 73.3
TWI38G2153 Tripterygium wilfordii HOM05D004656 ORTHO05D005404 5.4e-30 134.4 86 73.3
CAN.G1181.24 Capsicum annuum HOM05D004656 ORTHO05D005404 7.0e-30 134.0 86 72.1
Nitab4.5_0000190g0180 Nicotiana tabacum HOM05D004656 ORTHO05D005404 7.0e-30 134.0 86 72.1
Lalb_Chr05g0218181 Lupinus albus HOM05D004656 ORTHO05D005404 9.2e-30 133.7 86 72.1
PSO063G3544 Papaver somniferum HOM05D004656 ORTHO05D005404 9.2e-30 133.7 86 73.3
PSO782G2217 Papaver somniferum HOM05D004656 ORTHO05D005404 9.2e-30 133.7 86 73.3
A01p12840 Brassica napus HOM05D004656 ORTHO05D005404 1.2e-29 133.3 86 72.1
C01p15460 Brassica napus HOM05D004656 ORTHO05D005404 1.2e-29 133.3 86 70.9
BolC1t01500H Brassica oleracea HOM05D004656 ORTHO05D005404 1.2e-29 133.3 86 70.9
BraA01t01228Z Brassica rapa HOM05D004656 ORTHO05D005404 1.2e-29 133.3 86 72.1
Thhalv10024471m.g Eutrema salsugineum HOM05D004656 ORTHO05D005404 1.2e-29 133.3 86 72.1
Gohir.D10G021600 Gossypium hirsutum HOM05D004656 ORTHO05D005404 1.2e-29 133.3 85 74.1
Carub.0007s1989 Capsella rubella HOM05D004656 ORTHO05D005404 1.6e-29 132.9 86 73.3
Solyc02g079050.3 Solanum lycopersicum HOM05D004656 ORTHO05D005404 1.6e-29 132.9 86 72.1
VMungo0251G3002 Vigna mungo HOM05D004656 ORTHO05D005404 1.6e-29 132.9 86 72.1
AL7G32500 Arabidopsis lyrata HOM05D004656 ORTHO05D005404 2.0e-29 132.5 86 72.1
Cc02_g12490 Coffea canephora HOM05D004656 ORTHO05D005404 2.0e-29 132.5 86 70.9
Nitab4.5_0003574g0090 Nicotiana tabacum HOM05D004656 ORTHO05D005404 2.0e-29 132.5 86 70.9
BcaNung02790 Brassica carinata HOM05D004656 ORTHO05D005404 2.7e-29 132.1 86 70.9
Eucgr.D02667 Eucalyptus grandis HOM05D004656 ORTHO05D005404 2.7e-29 132.1 86 72.1
Eucgr.E03497 Eucalyptus grandis HOM05D004656 ORTHO05D005404 2.7e-29 132.1 86 72.1
FAN16G1451 Fragaria x ananassa HOM05D004656 ORTHO05D005404 2.7e-29 132.1 86 73.3
Phvul.002G222500 Phaseolus vulgaris HOM05D004656 ORTHO05D005404 2.7e-29 132.1 86 68.6
MBI16_g41806_MAGBIO Magnolia biondii HOM05D004656 ORTHO05D005404 3.5e-29 131.7 86 73.3
Thecc.06G198700 Theobroma cacao HOM05D004656 ORTHO05D005404 3.5e-29 131.7 87 71.3
TAR626G0166 Trochodendron aralioides HOM05D004656 ORTHO05D005404 3.5e-29 131.7 86 73.3
AT4G21530 Arabidopsis thaliana HOM05D004656 ORTHO05D005404 4.5e-29 131.3 86 69.8
HanXRQChr17g0551051 Helianthus annuus HOM05D004656 ORTHO05D005404 4.5e-29 131.3 86 72.1
Lsat_1_v5_gn_4_57080 Lactuca sativa HOM05D004656 ORTHO05D005404 5.9e-29 131.0 86 70.9
Manes.15G100000 Manihot esculenta HOM05D004656 ORTHO05D005404 5.9e-29 131.0 109 64.2
CANSAT56G3558 Cannabis sativa HOM05D004656 ORTHO05D005404 7.8e-29 130.6 86 72.1
Aqoxy7G03085 Aquilegia oxysepala HOM05D004656 ORTHO05D005404 1.0e-28 130.2 86 70.9
ECA234G0402 Erigeron canadensis HOM05D004656 ORTHO05D005404 1.7e-28 129.4 86 72.1
Eucgr.E03552 Eucalyptus grandis HOM05D004656 ORTHO05D005404 1.7e-28 129.4 85 71.8
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 1.7e-28 129.4 86 70.9
arahy.Tifrunner.gnm1.ann1.N579TE Arachis hypogaea HOM05D004656 ORTHO05D005404 2.3e-28 129.0 86 68.6
Ca_18486_v3 Cicer arietinum L. HOM05D004656 ORTHO05D005404 5.0e-28 127.9 86 67.4
Sp7g19640 Schrenkiella parvula HOM05D004656 ORTHO05D005404 6.6e-28 127.5 86 68.6
arahy.Tifrunner.gnm1.ann1.9GFP5H Arachis hypogaea HOM05D004656 ORTHO05D005404 8.6e-28 127.1 86 67.4
Sabra04G0020600 Salix brachista HOM05D004656 ORTHO05D005404 8.6e-28 127.1 86 69.8
TPR.G32417 Trifolium pratense HOM05D004656 ORTHO05D005404 8.6e-28 127.1 86 68.6
Medtr4g090990 Medicago truncatula HOM05D004656 ORTHO05D005404 2.5e-27 125.6 86 67.4
Potri.004G034900 Populus trichocarpa HOM05D004656 ORTHO05D005404 2.5e-27 125.6 86 68.6
Psat7g109640 Pisum sativum HOM05D004656 ORTHO05D005404 1.0e-25 120.2 86 65.1
HPP92_015366 Vanilla planifolia HOM05D004656 ORTHO05D005404 3.0e-25 118.6 86 61.6
ATR0580G317 Amborella trichopoda HOM05D004656 ORTHO05D005404 9.8e-24 113.6 86 60.5
BcaC09g51337 Brassica carinata HOM05D004656 ORTHO05D005404 6.4e-23 110.9 90 61.1
PGR042G3654 Punica granatum HOM05D004656 ORTHO05D005404 1.2e-21 106.7 60 83.3
Peaxi162Scf00588g01013 Petunia axillaris HOM05D004656 ORTHO05D005404 3.5e-21 105.1 86 61.6
BcaNung02789 Brassica carinata HOM05D004656 ORTHO05D005404 2.3e-20 102.4 112 50.9
BcaC09g51339 Brassica carinata HOM05D004656 ORTHO05D005404 3.0e-20 102.1 90 58.9
Zm00001eb192820 Zea mays HOM05D004656 ORTHO05D005404 3.9e-20 101.7 84 54.8
Eucgr.C00026 Eucalyptus grandis HOM05D004656 ORTHO05D005404 6.6e-20 100.9 63 76.2
QL02p031126 Quercus lobata HOM05D004656 ORTHO05D005404 1.9e-19 99.4 60 81.7
BcaC09g51334 Brassica carinata HOM05D004656 ORTHO05D005404 1.2e-18 96.7 76 63.2
CDE02G2476 Ceratophyllum demersum HOM05D004656 ORTHO05D005404 8.0e-18 94.0 90 54.4
SEGI_08767 Sequoiadendron giganteum HOM05D004656 ORTHO05D005404 8.9e-17 90.5 92 47.8
Pp3c19_17530 Physcomitrium patens HOM05D004656 ORTHO05D005404 5.8e-16 87.8 86 46.5
AL7G32520 Arabidopsis lyrata HOM05D004656 ORTHO05D005404 2.2e-15 85.9 60 68.3
AagrBONN_evm.TU.Sc2ySwM_117.1500 Anthoceros agrestis HOM05D004656 ORTHO05D005404 6.4e-15 84.3 86 41.9
Oeu053939.3 Olea europaea HOM05D004656 ORTHO05D005404 8.3e-15 84.0 63 61.9
Mapoly0038s0098 Marchantia polymorpha HOM05D004656 ORTHO05D005404 7.8e-13 77.4 86 40.7
CBR_g50890 Chara braunii HOM05D004656 ORTHO05D000048 8.6e-12 73.9 84 40.5


User provided reference genes

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