Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund23539 Selenicereus undatus HOM05D005409 ORTHO05D006456 0.0e+00 1231.1 626 100.0
AUR62012574 Chenopodium quinoa HOM05D005409 ORTHO05D006456 1.1e-196 690.6 642 61.8
EL10As6g23684 Beta vulgaris HOM05D005409 ORTHO05D006456 1.6e-195 686.8 652 62.0
AUR62014626 Chenopodium quinoa HOM05D005409 ORTHO05D006456 1.9e-193 679.9 642 61.8
Sc17g0006920 Simmondsia chinensis HOM05D005409 ORTHO05D006456 4.4e-190 668.7 631 58.3
Ah.14g088510 Amaranthus hybridus HOM05D005409 ORTHO05D006456 4.1e-180 635.6 643 58.9
Prupe.4G030000 Prunus persica HOM05D005409 ORTHO05D006456 3.4e-158 562.8 641 51.5
Cfa016400 Carpinus fangiana HOM05D005409 ORTHO05D006456 8.6e-154 548.1 640 51.4
Dinv18952 Davidia involucrata HOM05D005409 ORTHO05D006456 1.1e-153 547.7 669 49.3
Duzib192G0995 Durio zibethinus HOM05D005409 ORTHO05D006456 4.3e-153 545.8 647 50.7
MD05G1335400 Malus domestica HOM05D005409 ORTHO05D006456 2.1e-152 543.5 640 50.5
Thecc.06G207400 Theobroma cacao HOM05D005409 ORTHO05D006456 2.9e-149 533.1 653 49.8
COL.COLO4_33645 Corchorus olitorius HOM05D005409 ORTHO05D006456 4.6e-147 525.8 641 51.0
Ciclev10014614m.g Citrus clementina HOM05D005409 ORTHO05D006456 5.1e-146 522.3 637 48.4
Duzib235G0390 Durio zibethinus HOM05D005409 ORTHO05D006456 1.2e-144 517.7 659 48.6
MD10G1310800 Malus domestica HOM05D005409 ORTHO05D006456 1.6e-144 517.3 647 48.8
Gohir.D09G070300 Gossypium hirsutum HOM05D005409 ORTHO05D006456 2.4e-143 513.5 648 48.3
Manes.17G030300 Manihot esculenta HOM05D005409 ORTHO05D006456 3.1e-143 513.1 647 48.5
Gorai.006G084700 Gossypium raimondii HOM05D005409 ORTHO05D006456 2.6e-142 510.0 655 47.9
FAN25G1204 Fragaria x ananassa HOM05D005409 ORTHO05D006456 2.9e-141 506.5 676 47.0
Nn1g06923 Nelumbo nucifera HOM05D005409 ORTHO05D006456 2.9e-141 506.5 655 47.6
TAR624G1144 Trochodendron aralioides HOM05D005409 ORTHO05D006456 2.9e-141 506.5 653 47.3
Cc02_g11840 Coffea canephora HOM05D005409 ORTHO05D006456 3.8e-141 506.1 663 47.1
QL05p077347 Quercus lobata HOM05D005409 ORTHO05D006456 6.4e-141 505.4 698 47.3
Gohir.A09G070200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 1.1e-140 504.6 643 48.7
Actinidia11830 Actinidia chinensis HOM05D005409 ORTHO05D006456 2.4e-140 503.4 670 45.8
Hma1.2p1_0809F.1_g221770 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 2.4e-140 503.4 661 48.3
Gohir.D10G017400 Gossypium hirsutum HOM05D005409 ORTHO05D006456 9.3e-140 501.5 643 50.4
Gorai.011G019300 Gossypium raimondii HOM05D005409 ORTHO05D006456 9.3e-140 501.5 643 50.4
TAR626G0140 Trochodendron aralioides HOM05D005409 ORTHO05D006456 6.6e-138 495.4 651 48.7
Glyma.07G187300 Glycine max HOM05D005409 ORTHO05D006456 5.6e-137 492.3 651 46.5
Nitab4.5_0006456g0010 Nicotiana tabacum HOM05D005409 ORTHO05D006456 2.1e-136 490.3 663 46.2
Gohir.A10G017200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 2.8e-136 490.0 639 49.6
CiPaw.10G113200 Carya illinoinensis HOM05D005409 ORTHO05D006456 2.6e-134 483.4 646 47.2
CsaV3_1G011380 Cucumis sativus L. HOM05D005409 ORTHO05D006456 4.5e-134 482.6 642 47.0
TWI63G1109 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 9.9e-134 481.5 661 45.8
Sed0006411 Sechium edule HOM05D005409 ORTHO05D006456 4.9e-133 479.2 637 47.7
CANSAT35G0463 Cannabis sativa HOM05D005409 ORTHO05D006456 1.9e-132 477.2 644 47.2
ClCG03G005190 Citrullus lanatus HOM05D005409 ORTHO05D006456 9.3e-132 474.9 639 47.6
Nitab4.5_0000503g0080 Nicotiana tabacum HOM05D005409 ORTHO05D006456 1.2e-131 474.6 663 44.9
Lj4g0002185 Lotus japonicus HOM05D005409 ORTHO05D006456 2.7e-131 473.4 654 47.1
Lj2A276T57 Lonicera japonica HOM05D005409 ORTHO05D006456 4.6e-131 472.6 662 46.2
Ca_18454_v3 Cicer arietinum L. HOM05D005409 ORTHO05D006456 3.0e-130 469.9 651 47.5
Solyc02g079880.3 Solanum lycopersicum HOM05D005409 ORTHO05D006456 8.7e-130 468.4 663 44.3
Phvul.002G218900 Phaseolus vulgaris HOM05D005409 ORTHO05D006456 1.1e-129 468.0 649 45.8
Glyma.08G061800 Glycine max HOM05D005409 ORTHO05D006456 1.9e-129 467.2 652 45.2
CiPaw.10G113100 Carya illinoinensis HOM05D005409 ORTHO05D006456 2.5e-129 466.8 646 47.7
MELO3C002515.2 Cucumis melo HOM05D005409 ORTHO05D006456 2.8e-128 463.4 637 46.8
PGSC0003DMG400021722 Solanum tuberosum HOM05D005409 ORTHO05D006456 8.1e-128 461.8 667 44.4
Peaxi162Scf00759g00211 Petunia axillaris HOM05D005409 ORTHO05D006456 1.1e-127 461.5 661 44.5
Sopen02g024640 Solanum pennellii HOM05D005409 ORTHO05D006456 3.1e-127 459.9 666 43.7
Lalb_Chr09g0327161 Lupinus albus HOM05D005409 ORTHO05D006456 1.2e-126 458.0 643 45.4
VMungo0251G1750 Vigna mungo HOM05D005409 ORTHO05D006456 2.6e-126 456.8 660 45.8
Lj1A1221T57 Lonicera japonica HOM05D005409 ORTHO05D006456 1.6e-123 447.6 638 46.1
Aqoxy1G03830 Aquilegia oxysepala HOM05D005409 ORTHO05D006456 3.5e-123 446.4 689 44.4
Psat0s935g0040 Pisum sativum HOM05D005409 ORTHO05D006456 1.1e-121 441.4 652 46.5
Medtr4g092050 Medicago truncatula HOM05D005409 ORTHO05D006456 5.6e-121 439.1 650 44.9
PSO675G2591 Papaver somniferum HOM05D005409 ORTHO05D006456 8.2e-120 435.3 666 45.9
Lalb_Chr16g0383301 Lupinus albus HOM05D005409 ORTHO05D006456 1.8e-119 434.1 640 44.1
TPR.G13934 Trifolium pratense HOM05D005409 ORTHO05D006456 1.8e-119 434.1 650 45.7
Oeu016146.1 Olea europaea HOM05D005409 ORTHO05D006456 6.9e-119 432.2 658 42.7
ECA236G3644 Erigeron canadensis HOM05D005409 ORTHO05D006456 2.0e-118 430.6 653 44.0
PSO541G2946 Papaver somniferum HOM05D005409 ORTHO05D006456 3.4e-118 429.9 661 45.7
Hma1.2p1_0809F.1_g221760 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 4.9e-117 426.0 544 47.4
Potri.011G031900 Populus trichocarpa HOM05D005409 ORTHO05D006456 5.5e-116 422.5 647 45.1
HanXRQChr15g0482781 Helianthus annuus HOM05D005409 ORTHO05D006456 1.3e-114 417.9 654 43.6
MSTRG.15953 Avicennia marina HOM05D005409 ORTHO05D006456 1.8e-114 417.5 663 43.9
Rhsim02G0115600 Rhododendron simsii HOM05D005409 ORTHO05D006456 5.7e-113 412.5 718 41.2
HanXRQChr15g0482771 Helianthus annuus HOM05D005409 ORTHO05D006456 1.8e-111 407.5 653 43.0
vmacro15844 Vaccinium macrocarpon HOM05D005409 ORTHO05D006456 3.1e-111 406.8 681 41.6
MBI02_g26225_MAGBIO Magnolia biondii HOM05D005409 ORTHO05D006456 9.0e-111 405.2 657 44.4
DCAR_008109 Daucus carota HOM05D005409 ORTHO05D006456 1.0e-109 401.7 638 43.4
CSS0017238 Camellia sinensis var. sinensis HOM05D005409 ORTHO05D006456 4.2e-108 396.4 638 44.2
GSVIVG01006401001 Vitis vinifera HOM05D005409 ORTHO05D006456 1.6e-107 394.4 651 41.9
Eucgr.E03596 Eucalyptus grandis HOM05D005409 ORTHO05D006456 2.1e-107 394.0 552 44.4
Sabra11G0025100 Salix brachista HOM05D005409 ORTHO05D006456 7.9e-107 392.1 640 43.8
PGR042G2399 Punica granatum HOM05D005409 ORTHO05D006456 3.9e-106 389.8 644 42.2
Migut.M01258 Erythranthe guttata HOM05D005409 ORTHO05D006456 5.1e-106 389.4 659 42.0
Oeu050809.4 Olea europaea HOM05D005409 ORTHO05D006456 2.2e-101 374.0 663 38.5
TWI38G0167 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 6.5e-101 372.5 606 43.2
Lsat_1_v5_gn_7_18380 Lactuca sativa HOM05D005409 ORTHO05D006456 2.7e-99 367.1 645 41.1
DCAR_004174 Daucus carota HOM05D005409 ORTHO05D006456 6.1e-99 365.9 621 43.6
Haze_06671 Corylus avellana HOM05D005409 ORTHO05D006456 7.9e-99 365.5 443 48.3
FvH4_3g03030 Fragaria vesca HOM05D005409 ORTHO05D006456 1.8e-98 364.4 496 45.6
Cpa.g.sc81.2 Carica papaya HOM05D005409 ORTHO05D006456 1.1e-95 355.1 447 48.1
Sabra11G0019200 Salix brachista HOM05D005409 ORTHO05D006456 6.9e-95 352.4 640 41.7
GSVIVG01030650001 Vitis vinifera HOM05D005409 ORTHO05D006456 1.5e-94 351.3 641 39.3
Potri.007G119200 Populus trichocarpa HOM05D005409 ORTHO05D006456 1.2e-91 341.7 669 38.4
THA.LOC104809524 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 3.6e-91 340.1 652 39.3
Actinidia26760 Actinidia chinensis HOM05D005409 ORTHO05D006456 2.8e-88 330.5 526 40.7
Ah.09g237100 Amaranthus hybridus HOM05D000067 ORTHO05D006456 2.8e-88 330.5 622 39.5
Potri.017G041300 Populus trichocarpa HOM05D005409 ORTHO05D006456 5.3e-87 326.2 642 39.3
Actinidia24044 Actinidia chinensis HOM05D005409 ORTHO05D006456 9.1e-87 325.5 513 42.1
THA.LOC104818924 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 1.2e-86 325.1 595 39.0
Sabra17G0028000 Salix brachista HOM05D005409 ORTHO05D006456 3.5e-86 323.6 713 37.6
Sp1g10100 Schrenkiella parvula HOM05D005409 ORTHO05D006456 1.3e-85 321.6 639 40.1
AT1G11480 Arabidopsis thaliana HOM05D005409 ORTHO05D006456 1.9e-84 317.8 643 39.3
SGA_v2.0_scaffold7G03896 Striga asiatica HOM05D005409 ORTHO05D006456 5.5e-84 316.2 698 35.7
arahy.Tifrunner.gnm1.ann1.XK38U2 Arachis hypogaea HOM05D005409 ORTHO05D006456 9.4e-84 315.5 647 39.7
C05p09680 Brassica napus HOM05D005409 ORTHO05D006456 6.1e-83 312.8 639 39.0
BcaC05g25024 Brassica carinata HOM05D005409 ORTHO05D006456 1.8e-82 311.2 640 39.1
A06p08100 Brassica napus HOM05D005409 ORTHO05D006456 1.2e-81 308.5 638 38.9
CARHR011750 Cardamine hirsuta HOM05D005409 ORTHO05D006456 1.2e-81 308.5 641 38.7
Aa31LG1G3270 Aethionema arabicum HOM05D005409 ORTHO05D006456 2.0e-81 307.8 659 38.5
RcHm_v2.0_Chr5g0004681 Rosa chinensis HOM05D005409 ORTHO05D006456 1.3e-80 305.1 485 41.2
Thhalv10007161m.g Eutrema salsugineum HOM05D005409 ORTHO05D006456 1.7e-80 304.7 642 39.6
AL1G22590 Arabidopsis lyrata HOM05D005409 ORTHO05D006456 2.8e-80 303.9 648 39.2
SalBow8G4343 Salvia bowleyana HOM05D005409 ORTHO05D006456 3.1e-79 300.4 475 42.3
BolC5t29709H Brassica oleracea HOM05D005409 ORTHO05D006456 5.3e-79 299.7 595 39.3
CDE12G0800 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 1.6e-78 298.1 528 40.0
arahy.Tifrunner.gnm1.ann1.QZ9QK3 Arachis hypogaea HOM05D005409 ORTHO05D006456 3.5e-78 297.0 683 37.0
Actinidia26959 Actinidia chinensis HOM05D005409 ORTHO05D006456 5.9e-78 296.2 481 40.5
Carub.0001s1109 Capsella rubella HOM05D005409 ORTHO05D006456 1.3e-77 295.0 631 37.7
CDE01G0308 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 1.3e-77 295.0 643 36.7
BraA06t24009Z Brassica rapa HOM05D005409 ORTHO05D006456 4.2e-76 290.0 636 37.9
Sabra07G0096100 Salix brachista HOM05D005409 ORTHO05D006456 2.7e-75 287.3 767 32.3
HPP92_000870 Vanilla planifolia HOM05D005409 ORTHO05D006456 3.7e-72 276.9 674 37.5
Oeu050499.1 Olea europaea HOM05D005409 ORTHO05D006456 6.3e-64 249.6 445 40.7
Atru.chr6.3116 Acer truncatum HOM05D005409 ORTHO05D006456 5.6e-60 236.5 475 38.1
BcaNung07116 Brassica carinata HOM05D005409 ORTHO05D006456 2.1e-59 234.6 439 39.6
Os07g0546100 Oryza sativa ssp. japonica HOM05D005409 ORTHO05D006456 4.0e-58 230.3 659 33.4
Atru.chr10.2048 Acer truncatum HOM05D005409 ORTHO05D006456 4.4e-57 226.9 371 40.2
Zm00001eb323520 Zea mays HOM05D005409 ORTHO05D006456 7.8e-54 216.1 652 32.5
ATR0804G077 Amborella trichopoda HOM05D005409 ORTHO05D006456 1.7e-53 214.9 748 34.1
GSVIVG01006635001 Vitis vinifera HOM05D005409 ORTHO05D006456 1.7e-48 198.4 163 62.0
RcHm_v2.0_Chr5g0004671 Rosa chinensis HOM05D005409 ORTHO05D006456 5.2e-42 176.8 122 70.5
Atru.chr10.2047 Acer truncatum HOM05D005409 ORTHO05D006456 3.5e-38 164.1 248 43.1
Cpa.g.sc81.1 Carica papaya HOM05D005409 ORTHO05D006456 3.9e-37 160.6 193 51.8
SMO118G0050 Selaginella moellendorffii HOM05D005409 ORTHO05D006456 1.9e-31 141.7 747 28.5
Zm00001eb106500 Zea mays HOM05D005409 ORTHO05D006456 8.7e-29 132.9 430 33.7
Pp3c20_3440 Physcomitrium patens HOM05D005409 ORTHO05D006456 2.0e-25 121.7 919 23.5
Mapoly0113s0049 Marchantia polymorpha HOM05D005409 ORTHO05D006456 2.8e-19 101.3 967 22.6
Haze_06667 Corylus avellana HOM05D005409 ORTHO05D006456 7.6e-17 93.2 186 37.1
AagrBONN_evm.TU.Sc2ySwM_228.455 Anthoceros agrestis HOM05D005409 ORTHO05D006456 6.4e-16 90.1 107 49.5
Atru.chr6.3115 Acer truncatum HOM05D005409 ORTHO05D006456 1.1e-15 89.4 194 39.2
CBR_g36658 Chara braunii HOM05D005409 ORTHO05D006456 1.3e-13 82.4 115 46.1
QL05p012359 Quercus lobata HOM05D005409 ORTHO05D006456 1.6e-11 75.5 120 38.3
Actinidia26960 Actinidia chinensis HOM05D005409 ORTHO05D006456 7.6e-09 66.6 74 52.7
SEGI_29006 Sequoiadendron giganteum HOM05D005409 ORTHO05D006456 2.7e-06 58.2 248 33.5


User provided reference genes

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