Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund23465 Selenicereus undatus HOM05D007037 ORTHO05D006691 2.2e-31 138.3 68 100.0
EL10Ac8g20067 Beta vulgaris HOM05D007037 ORTHO05D006691 7.7e-16 86.7 69 63.8
Ciclev10018055m.g Citrus clementina HOM05D007037 ORTHO05D006691 5.4e-09 63.9 63 54.0
Duzib192G0147 Durio zibethinus HOM05D007037 ORTHO05D006691 5.4e-09 63.9 74 48.6
FAN25G2740 Fragaria x ananassa HOM05D007037 ORTHO05D006691 3.5e-08 61.2 79 48.1
CSS0006945 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 4.5e-08 60.8 79 48.1
COL.COLO4_00342 Corchorus olitorius HOM05D007037 ORTHO05D006691 4.5e-08 60.8 74 48.6
Oeu025269.1 Olea europaea HOM05D007037 ORTHO05D006691 4.5e-08 60.8 75 48.0
Atru.chr10.2236 Acer truncatum HOM05D007037 ORTHO05D006691 1.3e-07 59.3 77 48.1
Thecc.06G221700 Theobroma cacao HOM05D007037 ORTHO05D006691 1.3e-07 59.3 75 48.0
Nitab4.5_0000005g0340 Nicotiana tabacum HOM05D007037 ORTHO05D006691 1.7e-07 58.9 76 46.1
Hma1.2p1_0749F.1_g212630 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 2.3e-07 58.5 77 46.8
Hma1.2p1_0749F.1_g212635 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 2.3e-07 58.5 77 46.8
MD10G1322200 Malus domestica HOM05D007037 ORTHO05D006691 2.9e-07 58.2 77 49.4
RcHm_v2.0_Chr5g0002881 Rosa chinensis HOM05D007037 ORTHO05D006691 2.9e-07 58.2 76 47.4
MD05G1347800 Malus domestica HOM05D007037 ORTHO05D006691 3.8e-07 57.8 77 48.1
Nitab4.5_0009030g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 3.8e-07 57.8 76 43.4
Sopen02g011150 Solanum pennellii HOM05D007037 ORTHO05D006691 3.8e-07 57.8 71 43.7
Manes.16G006400 Manihot esculenta HOM05D007037 ORTHO05D006691 5.0e-07 57.4 78 44.9
CiPaw.09G092600 Carya illinoinensis HOM05D007037 ORTHO05D006691 6.6e-07 57.0 79 45.6
Prupe.4G019700 Prunus persica HOM05D007037 ORTHO05D006691 6.6e-07 57.0 77 46.8
TAR624G1029 Trochodendron aralioides HOM05D007037 ORTHO05D006691 6.6e-07 57.0 81 46.9
Dinv13899 Davidia involucrata HOM05D001191 ORTHO05D000979 8.6e-07 56.6 77 42.9
Eucgr.E04050 Eucalyptus grandis HOM05D007037 ORTHO05D006691 8.6e-07 56.6 74 43.2
Gorai.009G179200 Gossypium raimondii HOM05D007037 ORTHO05D006691 8.6e-07 56.6 74 45.9
Lj4g0019440 Lotus japonicus HOM05D007037 ORTHO05D006691 1.5e-06 55.8 64 50.0
AL2G13860 Arabidopsis lyrata HOM05D007037 ORTHO05D006691 1.9e-06 55.5 66 47.0
Ca_21080_v3 Cicer arietinum L. HOM05D007037 ORTHO05D006691 1.9e-06 55.5 64 43.8
DCAR_008156 Daucus carota HOM05D007037 ORTHO05D006691 1.9e-06 55.5 77 45.5
Peaxi162Scf01204g00120 Petunia axillaris HOM05D007037 ORTHO05D006691 1.9e-06 55.5 67 47.8
TPR.G37004 Trifolium pratense HOM05D007037 ORTHO05D006691 1.9e-06 55.5 69 43.5
ECA234G0681 Erigeron canadensis HOM05D007037 ORTHO05D006691 2.5e-06 55.1 73 42.5
Gohir.A05G170900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 2.5e-06 55.1 75 48.0
Manes.01G159201 Manihot esculenta HOM05D007037 ORTHO05D006691 2.5e-06 55.1 78 43.6
Sed0008683 Sechium edule HOM05D007037 ORTHO05D006691 2.5e-06 55.1 57 56.1
BcaC05g25043 Brassica carinata HOM05D001191 ORTHO05D000979 3.3e-06 54.7 69 43.5
Potri.004G013601 Populus trichocarpa HOM05D007037 ORTHO05D006691 3.3e-06 54.7 75 44.0
THA.LOC104823525 Tarenaya hassleriana HOM05D007037 ORTHO05D006691 3.3e-06 54.7 71 42.3
Gohir.D05G173900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 4.2e-06 54.3 74 44.6
Potri.011G004400 Populus trichocarpa HOM05D007037 ORTHO05D006691 4.2e-06 54.3 76 47.4
PGSC0003DMG400019869 Solanum tuberosum HOM05D007037 ORTHO05D006691 4.2e-06 54.3 67 46.3
Aqoxy1G02111 Aquilegia oxysepala HOM05D007037 ORTHO05D006691 5.5e-06 53.9 72 47.2
A06p08290 Brassica napus HOM05D007037 ORTHO05D006691 5.5e-06 53.9 69 43.5
QL05p073032 Quercus lobata HOM05D007037 ORTHO05D006691 5.5e-06 53.9 76 44.7
SalBow8G3366 Salvia bowleyana HOM05D007037 ORTHO05D006691 5.5e-06 53.9 59 50.8
C05p09860 Brassica napus HOM05D007037 ORTHO05D006691 7.2e-06 53.5 69 43.5
Carub.0001s1138 Capsella rubella HOM05D007037 ORTHO05D006691 7.2e-06 53.5 71 47.9
FAN21G2981 Fragaria x ananassa HOM05D001191 ORTHO05D000979 7.2e-06 53.5 76 44.7
Glyma.17G012900 Glycine max HOM05D007037 ORTHO05D006691 7.2e-06 53.5 64 43.8
Lsat_1_v5_gn_4_60821 Lactuca sativa HOM05D007037 ORTHO05D006691 7.2e-06 53.5 74 41.9
Sp1g10350 Schrenkiella parvula HOM05D001191 ORTHO05D000979 7.2e-06 53.5 67 43.3
Aa31LG1G3030 Aethionema arabicum HOM05D007037 ORTHO05D006691 9.5e-06 53.1 67 46.3
AT1G11740 Arabidopsis thaliana HOM05D001191 ORTHO05D000979 9.5e-06 53.1 68 45.6
Cc09_g01610 Coffea canephora HOM05D007037 ORTHO05D006691 9.5e-06 53.1 74 44.6


User provided reference genes

Program Settings