Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund23406 Selenicereus undatus HOM05D007192 ORTHO05D009034 1.4e-97 359.8 200 100.0
Ah.14g087620 Amaranthus hybridus HOM05D007192 ORTHO05D009034 2.1e-45 186.4 206 61.7
Hma1.2p1_0657F.1_g197140 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 5.2e-44 181.8 217 50.7
TWI38G0802 Tripterygium wilfordii HOM05D007192 ORTHO05D009034 1.6e-40 170.2 208 53.8
Prupe.4G010200 Prunus persica HOM05D007192 ORTHO05D009034 1.7e-39 166.8 188 55.3
GSVIVG01003334001 Vitis vinifera HOM05D007192 ORTHO05D009034 2.3e-39 166.4 214 52.8
Dinv13967 Davidia involucrata HOM05D001152 ORTHO05D000967 5.0e-39 165.2 209 49.3
Sc24g0000280 Simmondsia chinensis HOM05D007192 ORTHO05D009034 5.0e-39 165.2 154 66.2
Dinv07405 Davidia involucrata HOM05D007192 ORTHO05D009034 8.6e-39 164.5 221 48.9
CiPaw.09G102500 Carya illinoinensis HOM05D007192 ORTHO05D009034 2.5e-38 162.9 189 51.3
MELO3C007436.2 Cucumis melo HOM05D007192 ORTHO05D009034 3.3e-38 162.5 210 52.4
TAR629G2173 Trochodendron aralioides HOM05D007192 ORTHO05D009034 3.3e-38 162.5 170 58.2
PGR042G3283 Punica granatum HOM05D007192 ORTHO05D009034 4.3e-38 162.2 208 48.1
Thecc.06G233600 Theobroma cacao HOM05D007192 ORTHO05D009034 3.6e-37 159.1 210 51.0
Oeu016820.1 Olea europaea HOM05D007192 ORTHO05D009034 1.4e-36 157.1 227 47.6
FvH4_3g00960 Fragaria vesca HOM05D007192 ORTHO05D009034 1.8e-36 156.8 207 46.9
Gohir.A06G205200 Gossypium hirsutum HOM05D007192 ORTHO05D009034 1.8e-36 156.8 209 51.7
Hma1.2p1_0657F.1_g197150 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 3.0e-36 156.0 273 40.3
Nn1g07392 Nelumbo nucifera HOM05D007192 ORTHO05D009034 3.0e-36 156.0 212 51.4
RcHm_v2.0_Chr5g0001481 Rosa chinensis HOM05D007192 ORTHO05D009034 3.0e-36 156.0 207 48.3
Gohir.D06G216300 Gossypium hirsutum HOM05D007192 ORTHO05D009034 4.0e-36 155.6 209 52.2
Gorai.010G249900 Gossypium raimondii HOM05D007192 ORTHO05D009034 4.0e-36 155.6 209 52.2
Atru.chr1.2446 Acer truncatum HOM05D007192 ORTHO05D009034 1.5e-35 153.7 169 56.8
MD05G1358000 Malus domestica HOM05D007192 ORTHO05D009034 2.0e-35 153.3 202 51.5
Ciclev10016735m.g Citrus clementina HOM05D007192 ORTHO05D009034 7.5e-35 151.4 179 53.6
Glyma.07G265300 Glycine max HOM05D007192 ORTHO05D009034 7.5e-35 151.4 202 49.5
QL05p069683 Quercus lobata HOM05D007192 ORTHO05D009034 1.3e-34 150.6 213 51.6
CsaV3_6G048500 Cucumis sativus L. HOM05D007192 ORTHO05D009034 1.7e-34 150.2 211 53.1
MD10G1331900 Malus domestica HOM05D007192 ORTHO05D009034 4.9e-34 148.7 170 55.3
Potri.016G013500 Populus trichocarpa HOM05D007192 ORTHO05D009034 8.3e-34 147.9 170 52.9
CANSAT56G2005 Cannabis sativa HOM05D007192 ORTHO05D009034 1.4e-33 147.1 165 55.2
Sabra06G0008700 Salix brachista HOM05D007192 ORTHO05D009034 1.4e-33 147.1 173 55.5
Sopen11g007060 Solanum pennellii HOM05D007192 ORTHO05D009034 1.4e-33 147.1 213 44.6
Solyc11g012280.2 Solanum lycopersicum HOM05D007192 ORTHO05D009034 2.4e-33 146.4 213 44.1
Glyma.17G008700 Glycine max HOM05D007192 ORTHO05D009034 4.1e-33 145.6 198 48.5
SalBow8G5140 Salvia bowleyana HOM05D007192 ORTHO05D009034 5.4e-33 145.2 189 47.6
Sed0016386 Sechium edule HOM05D007192 ORTHO05D009034 5.4e-33 145.2 201 50.2
ClCG01G021480 Citrullus lanatus HOM05D007192 ORTHO05D009034 7.0e-33 144.8 219 49.8
Haze_08662 Corylus avellana HOM05D007192 ORTHO05D009034 7.0e-33 144.8 214 50.9
Cfa000100 Carpinus fangiana HOM05D007192 ORTHO05D009034 1.6e-32 143.7 149 61.7
Lj4g0002454 Lotus japonicus HOM05D007192 ORTHO05D009034 1.6e-32 143.7 187 52.9
Aqoxy2G00603 Aquilegia oxysepala HOM05D007192 ORTHO05D009034 2.0e-32 143.3 178 51.1
MSTRG.14611 Avicennia marina HOM05D007192 ORTHO05D009034 1.3e-31 140.6 179 48.6
Duzib192G0317 Durio zibethinus HOM05D007192 ORTHO05D009034 1.3e-31 140.6 156 53.2
arahy.Tifrunner.gnm1.ann1.E8J80R Arachis hypogaea HOM05D007192 ORTHO05D009034 1.7e-31 140.2 197 50.3
Duzib235G0907 Durio zibethinus HOM05D007192 ORTHO05D009034 1.7e-31 140.2 214 50.0
PGSC0003DMG400013349 Solanum tuberosum HOM05D007192 ORTHO05D009034 1.7e-31 140.2 214 43.9
TPR.G37116 Trifolium pratense HOM05D007192 ORTHO05D009034 1.5e-30 137.1 168 50.6
CDE08G0359 Ceratophyllum demersum HOM05D007192 ORTHO05D009034 1.9e-30 136.7 181 48.1
Phvul.003G083700 Phaseolus vulgaris HOM05D007192 ORTHO05D009034 5.6e-30 135.2 207 46.4
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 7.3e-30 134.8 167 49.1
Eucgr.E03926 Eucalyptus grandis HOM05D007192 ORTHO05D009034 1.2e-29 134.0 203 46.3
CARHR192700 Cardamine hirsuta HOM05D007192 ORTHO05D009034 1.6e-29 133.7 164 50.0
FAN21G0227 Fragaria x ananassa HOM05D007192 ORTHO05D009034 1.6e-29 133.7 147 48.3
Medtr4g133070 Medicago truncatula HOM05D007192 ORTHO05D009034 1.6e-29 133.7 166 51.2
Peaxi162Scf00352g00210 Petunia axillaris HOM05D007192 ORTHO05D009034 6.2e-29 131.7 211 42.7
THA.LOC104799643 Tarenaya hassleriana HOM05D007192 ORTHO05D009034 6.2e-29 131.7 163 52.8
PSO541G1889 Papaver somniferum HOM05D007192 ORTHO05D009034 1.4e-28 130.6 210 47.6
Nitab4.5_0011595g0010 Nicotiana tabacum HOM05D007192 ORTHO05D009034 3.1e-28 129.4 199 44.2
Nitab4.5_0000143g0180 Nicotiana tabacum HOM05D007192 ORTHO05D009034 4.0e-28 129.0 199 43.2
PSO675G6515 Papaver somniferum HOM05D007192 ORTHO05D009034 4.0e-28 129.0 211 49.8
Rhsim02G0145900 Rhododendron simsii HOM05D007192 ORTHO05D009034 4.0e-28 129.0 186 46.8
HPP92_000005 Vanilla planifolia HOM05D007192 ORTHO05D009034 4.0e-28 129.0 173 45.7
CAN.G1186.41 Capsicum annuum HOM05D007192 ORTHO05D009034 2.6e-27 126.3 187 47.1
BcaB05g22869 Brassica carinata HOM05D007192 ORTHO05D009034 3.4e-27 125.9 166 48.8
Actinidia26860 Actinidia chinensis HOM05D007192 ORTHO05D009034 5.8e-27 125.2 162 54.3
EL10Ac8g20192 Beta vulgaris HOM05D007192 ORTHO05D009034 5.8e-27 125.2 123 69.1
HanXRQChr10g0285171 Helianthus annuus HOM05D007192 ORTHO05D009034 1.3e-26 124.0 168 45.2
AT5G20130 Arabidopsis thaliana HOM05D007192 ORTHO05D009034 1.7e-26 123.6 163 49.1
Sp6g24270 Schrenkiella parvula HOM05D007192 ORTHO05D009034 2.2e-26 123.2 181 45.3
Lsat_1_v5_gn_0_23500 Lactuca sativa HOM05D007192 ORTHO05D009034 3.7e-26 122.5 177 43.5
Thhalv10014703m.g Eutrema salsugineum HOM05D007192 ORTHO05D009034 4.9e-26 122.1 167 49.1
Carub.0006s1851 Capsella rubella HOM05D007192 ORTHO05D009034 2.4e-25 119.8 164 48.2
VMungo1215G1962 Vigna mungo HOM05D007192 ORTHO05D009034 2.4e-25 119.8 187 44.4
ATR0776G058 Amborella trichopoda HOM05D007192 ORTHO05D009034 3.2e-25 119.4 157 51.0
unitig_37.g12189 Utricularia gibba HOM05D007192 ORTHO05D009034 5.4e-25 118.6 167 40.7
Lalb_Chr07g0176981 Lupinus albus HOM05D007192 ORTHO05D009034 1.2e-24 117.5 174 44.8
AL6G31680 Arabidopsis lyrata HOM05D007192 ORTHO05D009034 2.0e-24 116.7 163 48.5
DCAR_004888 Daucus carota HOM05D007192 ORTHO05D009034 2.7e-24 116.3 193 45.1
ECA248G2945 Erigeron canadensis HOM05D007192 ORTHO05D009034 6.0e-24 115.2 206 41.3
BcaC03g13735 Brassica carinata HOM05D007192 ORTHO05D009034 1.3e-23 114.0 194 43.8
BolC2t07017H Brassica oleracea HOM05D007192 ORTHO05D009034 1.3e-23 114.0 194 43.8
Cc09_g00850 Coffea canephora HOM05D007192 ORTHO05D009034 1.3e-23 114.0 219 42.5
C03p11420 Brassica napus HOM05D007192 ORTHO05D009034 1.7e-23 113.6 193 46.1
BNapus_Darmor_BZH_scaffold_38p01780 Brassica napus HOM05D007192 ORTHO05D009034 3.0e-23 112.8 192 43.8
BraA02t05557Z Brassica rapa HOM05D007192 ORTHO05D009034 3.0e-23 112.8 192 43.8
Aa31LG2G11450 Aethionema arabicum HOM05D007192 ORTHO05D009034 4.3e-22 109.0 148 51.4
Psat4g005120 Pisum sativum HOM05D007192 ORTHO05D009034 4.3e-22 109.0 130 53.8
Manes.09G076800 Manihot esculenta HOM05D007192 ORTHO05D009034 1.2e-21 107.5 185 44.9
A03p09840 Brassica napus HOM05D007192 ORTHO05D009034 2.1e-21 106.7 189 43.4
BraA03t10299Z Brassica rapa HOM05D007192 ORTHO05D009034 2.1e-21 106.7 189 43.4
vmacro03641 Vaccinium macrocarpon HOM05D007192 ORTHO05D009034 6.2e-21 105.1 154 44.8
FAN25G1082 Fragaria x ananassa HOM05D007192 ORTHO05D009034 2.0e-19 100.1 126 46.8
Migut.M01397 Erythranthe guttata HOM05D007192 ORTHO05D009034 8.3e-18 94.7 139 50.4
Lj2A261T34 Lonicera japonica HOM05D007192 ORTHO05D009034 2.1e-16 90.1 161 42.2
SGA_v2.0_scaffold4G01874 Striga asiatica HOM05D007192 ORTHO05D009034 2.1e-16 90.1 136 50.7
Potri.006G010600 Populus trichocarpa HOM05D007192 ORTHO05D009034 6.0e-16 88.6 126 49.2
Pp3c14_17130 Physcomitrium patens HOM05D007192 ORTHO05D009034 3.6e-13 79.3 174 42.0
SEGI_14587 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 6.2e-13 78.6 208 37.5
BcaB01g04801 Brassica carinata HOM05D007192 ORTHO05D009034 8.1e-13 78.2 179 34.6
AUR62021857 Chenopodium quinoa HOM05D007192 ORTHO05D009034 8.1e-13 78.2 200 32.5
SEGI_15910 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 2.6e-11 73.2 152 40.1
BcaB01g04802 Brassica carinata HOM05D007192 ORTHO05D009034 3.4e-11 72.8 100 44.0
AagrBONN_evm.TU.Sc2ySwM_362.1438 Anthoceros agrestis HOM05D007192 ORTHO05D009034 2.2e-10 70.1 189 33.3
BolC3t13616H Brassica oleracea HOM05D007192 ORTHO05D009034 1.9e-09 67.0 170 33.5
COL.COLO4_31887 Corchorus olitorius HOM05D007192 ORTHO05D009034 1.0e-07 61.2 81 45.7
Mapoly0007s0283 Marchantia polymorpha HOM05D007192 ORTHO05D009034 1.9e-06 57.0 178 34.3
Mapoly0252s0005 Marchantia polymorpha HOM05D007192 ORTHO05D009034 1.9e-06 57.0 178 34.3


User provided reference genes

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