Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund23239 Selenicereus undatus HOM05D006936 ORTHO05D008273 1.5e-167 592.8 304 100.0
Sc16g0005990 Simmondsia chinensis HOM05D006936 ORTHO05D008273 4.5e-39 166.0 172 54.1
EL10Ac4g07798 Beta vulgaris HOM05D006936 ORTHO05D008273 2.9e-38 163.3 190 51.6
CiPaw.11G190300 Carya illinoinensis HOM05D006936 ORTHO05D008273 2.7e-36 156.8 192 48.4
PGR031G2182 Punica granatum HOM05D006936 ORTHO05D008273 4.6e-36 156.0 172 50.0
Manes.03G129900 Manihot esculenta HOM05D006936 ORTHO05D008273 3.0e-35 153.3 169 52.7
MD11G1216700 Malus domestica HOM05D006936 ORTHO05D008273 3.9e-35 152.9 177 49.7
Thecc.07G035400 Theobroma cacao HOM05D006936 ORTHO05D008273 1.5e-34 151.0 152 54.6
TWI39G1260 Tripterygium wilfordii HOM05D006936 ORTHO05D008273 2.5e-34 150.2 186 44.6
Potri.003G122100 Populus trichocarpa HOM05D006936 ORTHO05D008273 5.7e-34 149.1 190 47.9
Eucgr.F03471 Eucalyptus grandis HOM05D006936 ORTHO05D008273 9.7e-34 148.3 190 46.3
Haze_09683 Corylus avellana HOM05D006936 ORTHO05D008273 1.6e-33 147.5 232 41.8
PSO210G5704 Papaver somniferum HOM05D006936 ORTHO05D008273 2.2e-33 147.1 151 51.0
GSVIVG01037658001 Vitis vinifera HOM05D006936 ORTHO05D008273 3.7e-33 146.4 171 49.1
Hma1.2p1_0738F.1_g211120 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 4.8e-33 146.0 169 50.3
Hma1.2p1_2518F.1_g323766 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 4.8e-33 146.0 169 50.3
PSO832G3825 Papaver somniferum HOM05D006936 ORTHO05D008273 4.8e-33 146.0 157 50.3
Prupe.4G214700 Prunus persica HOM05D006936 ORTHO05D008273 1.1e-32 144.8 169 46.7
Rhsim06G0217500 Rhododendron simsii HOM05D000228 ORTHO05D001122 1.1e-32 144.8 170 52.4
Cpa.g.sc12.300 Carica papaya HOM05D006936 ORTHO05D008273 1.4e-32 144.4 162 49.4
Aqoxy3G01790 Aquilegia oxysepala HOM05D006936 ORTHO05D008273 3.1e-32 143.3 169 47.3
Cfa020336 Carpinus fangiana HOM05D000228 ORTHO05D001122 3.1e-32 143.3 173 47.4
CsaV3_3G005130 Cucumis sativus L. HOM05D006936 ORTHO05D008273 4.1e-32 142.9 173 50.3
arahy.Tifrunner.gnm1.ann1.MX8M57 Arachis hypogaea HOM05D006936 ORTHO05D008273 9.0e-32 141.7 191 46.6
Cc05_g13850 Coffea canephora HOM05D006936 ORTHO05D008273 9.0e-32 141.7 191 47.1
Gohir.D01G067300 Gossypium hirsutum HOM05D006936 ORTHO05D008273 9.0e-32 141.7 173 48.6
Gorai.002G089200 Gossypium raimondii HOM05D006936 ORTHO05D008273 9.0e-32 141.7 173 48.6
Sopen07g032840 Solanum pennellii HOM05D006936 ORTHO05D008273 9.0e-32 141.7 189 43.4
PGSC0003DMG401022215 Solanum tuberosum HOM05D006936 ORTHO05D008273 9.0e-32 141.7 189 43.4
Solyc07g064640.3 Solanum lycopersicum HOM05D006936 ORTHO05D008273 1.2e-31 141.4 189 43.4
TAR624G1327 Trochodendron aralioides HOM05D006936 ORTHO05D008273 1.2e-31 141.4 159 49.7
ClCG10G005400 Citrullus lanatus HOM05D006936 ORTHO05D008273 1.5e-31 141.0 173 49.1
arahy.Tifrunner.gnm1.ann1.HAV09U Arachis hypogaea HOM05D006936 ORTHO05D008273 2.0e-31 140.6 191 46.1
FAN16G3045 Fragaria x ananassa HOM05D006936 ORTHO05D008273 2.0e-31 140.6 173 47.4
TWI38G2356 Tripterygium wilfordii HOM05D006936 ORTHO05D008273 2.0e-31 140.6 169 46.7
CSS0049611 Camellia sinensis var. sinensis HOM05D006936 ORTHO05D008273 2.6e-31 140.2 170 49.4
Nitab4.5_0007360g0030 Nicotiana tabacum HOM05D006936 ORTHO05D008273 2.6e-31 140.2 172 46.5
Nitab4.5_0003495g0030 Nicotiana tabacum HOM05D006936 ORTHO05D008273 3.4e-31 139.8 172 46.5
Duzib213G0701 Durio zibethinus HOM05D006936 ORTHO05D008273 7.7e-31 138.7 173 49.7
Glyma.08G317000 Glycine max HOM05D006936 ORTHO05D008273 1.0e-30 138.3 190 44.7
QL08p009960 Quercus lobata HOM05D006936 ORTHO05D008273 1.3e-30 137.9 168 48.2
Sabra01G0082900 Salix brachista HOM05D006936 ORTHO05D008273 1.7e-30 137.5 182 46.2
AL7G25870 Arabidopsis lyrata HOM05D006936 ORTHO05D008273 2.9e-30 136.7 169 47.3
Ca_19852_v3 Cicer arietinum L. HOM05D006936 ORTHO05D008273 2.9e-30 136.7 175 43.4
RcHm_v2.0_Chr5g0040171 Rosa chinensis HOM05D006936 ORTHO05D008273 2.9e-30 136.7 228 39.5
Glyma.18G095900 Glycine max HOM05D006936 ORTHO05D008273 3.8e-30 136.3 173 45.7
Lj6g0001928 Lotus japonicus HOM05D006936 ORTHO05D008273 3.8e-30 136.3 191 45.5
Oeu048401.1 Olea europaea HOM05D006936 ORTHO05D008273 3.8e-30 136.3 152 48.0
AT4G26965 Arabidopsis thaliana HOM05D006936 ORTHO05D008273 5.0e-30 136.0 169 47.9
AUR62020430 Chenopodium quinoa HOM05D006936 ORTHO05D008273 5.0e-30 136.0 172 51.7
Ciclev10009642m.g Citrus clementina HOM05D006936 ORTHO05D008273 5.0e-30 136.0 184 46.7
FvH4_3g22870 Fragaria vesca HOM05D006936 ORTHO05D008273 5.0e-30 136.0 167 47.3
FAN11G3489 Fragaria x ananassa HOM05D006936 ORTHO05D008273 5.0e-30 136.0 167 47.3
Psat5g178440 Pisum sativum HOM05D006936 ORTHO05D008273 5.0e-30 136.0 155 49.0
Potri.001G109600 Populus trichocarpa HOM05D006936 ORTHO05D008273 5.0e-30 136.0 167 46.7
Medtr3g052260 Medicago truncatula HOM05D006936 ORTHO05D008273 6.5e-30 135.6 170 44.7
Sed0005355 Sechium edule HOM05D006936 ORTHO05D008273 6.5e-30 135.6 166 46.4
Sabra18G0079500 Salix brachista HOM05D006936 ORTHO05D008273 8.5e-30 135.2 136 52.2
VMungo0540G1312 Vigna mungo HOM05D006936 ORTHO05D008273 8.5e-30 135.2 173 47.4
FAN21G0204 Fragaria x ananassa HOM05D006936 ORTHO05D008273 1.1e-29 134.8 188 43.6
CAN.G337.138 Capsicum annuum HOM05D006936 ORTHO05D008273 1.9e-29 134.0 131 53.4
DCAR_022566 Daucus carota HOM05D006936 ORTHO05D008273 3.2e-29 133.3 168 45.2
Phvul.006G044500 Phaseolus vulgaris HOM05D006936 ORTHO05D008273 3.2e-29 133.3 192 43.2
TPR.G33779 Trifolium pratense HOM05D006936 ORTHO05D008273 4.2e-29 132.9 151 47.7
Gohir.A01G080100 Gossypium hirsutum HOM05D006936 ORTHO05D008273 9.4e-29 131.7 173 47.4
Atru.chr2.3444 Acer truncatum HOM05D006936 ORTHO05D008273 1.2e-28 131.3 131 52.7
Lalb_Chr20g0113821 Lupinus albus HOM05D006936 ORTHO05D008273 1.2e-28 131.3 169 44.4
MELO3C025377.2 Cucumis melo HOM05D006936 ORTHO05D008273 1.6e-28 131.0 172 47.7
vmacro02233 Vaccinium macrocarpon HOM05D006936 ORTHO05D008273 2.7e-28 130.2 131 52.7
Hma1.2p1_0738F.1_g211110 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 6.1e-28 129.0 74 77.0
Migut.H01824 Erythranthe guttata HOM05D006936 ORTHO05D008273 1.0e-27 128.3 146 45.9
BcaC07g38260 Brassica carinata HOM05D006936 ORTHO05D008273 1.4e-27 127.9 168 43.5
SGA_v2.0_scaffold8G04322 Striga asiatica HOM05D006936 ORTHO05D008273 1.4e-27 127.9 190 44.2
Thhalv10026517m.g Eutrema salsugineum HOM05D006936 ORTHO05D008273 1.8e-27 127.5 168 42.9
Carub.0007s1390 Capsella rubella HOM05D006936 ORTHO05D008273 2.3e-27 127.1 162 45.1
HPP92_004131 Vanilla planifolia HOM05D006936 ORTHO05D008273 2.3e-27 127.1 160 43.8
THA.LOC104813424 Tarenaya hassleriana HOM05D006936 ORTHO05D008273 6.7e-27 125.6 152 43.4
unitig_8.g4785 Utricularia gibba HOM05D006936 ORTHO05D008273 6.7e-27 125.6 146 45.9
BcaNung03571 Brassica carinata HOM05D006936 ORTHO05D008273 8.8e-27 125.2 192 39.1
CDE05G0574 Ceratophyllum demersum HOM05D006936 ORTHO05D008273 1.1e-26 124.8 167 44.3
Sp7g24910 Schrenkiella parvula HOM05D006936 ORTHO05D008273 1.5e-26 124.4 181 42.5
MSTRG.12976 Avicennia marina HOM05D006936 ORTHO05D008273 4.3e-26 122.9 151 47.0
Os09g0500200 Oryza sativa ssp. japonica HOM05D006936 ORTHO05D008273 4.3e-26 122.9 190 40.5
ATR1094G005 Amborella trichopoda HOM05D006936 ORTHO05D008273 5.7e-26 122.5 178 42.1
A08p20640 Brassica napus HOM05D006936 ORTHO05D008273 1.3e-25 121.3 162 43.2
Zm00001eb102230 Zea mays HOM05D006936 ORTHO05D008273 2.8e-25 120.2 163 42.9
C08p10070 Brassica napus HOM05D006936 ORTHO05D008273 3.7e-25 119.8 168 42.9
BolC8t48685H Brassica oleracea HOM05D006936 ORTHO05D008273 3.7e-25 119.8 168 42.9
MBI02_g21871_MAGBIO Magnolia biondii HOM05D006936 ORTHO05D008273 3.7e-25 119.8 208 37.5
BraA08t34018Z Brassica rapa HOM05D006936 ORTHO05D008273 8.2e-25 118.6 146 43.2
HanXRQChr03g0076461 Helianthus annuus HOM05D006936 ORTHO05D008273 8.2e-25 118.6 174 39.1
Lsat_1_v5_gn_9_93840 Lactuca sativa HOM05D006936 ORTHO05D008273 1.4e-24 117.9 169 39.1
BcaB03g12517 Brassica carinata HOM05D006936 ORTHO05D008273 1.8e-24 117.5 184 40.2
Peaxi162Scf00235g00220 Petunia axillaris HOM05D006936 ORTHO05D008273 1.8e-24 117.5 202 39.6
ECA240G2843 Erigeron canadensis HOM05D006936 ORTHO05D008273 1.5e-23 114.4 157 42.0
C01p23100 Brassica napus HOM05D006936 ORTHO05D008273 4.5e-23 112.8 196 37.2
A01p18140 Brassica napus HOM05D006936 ORTHO05D008273 5.9e-23 112.5 187 38.5
BolC1t02244H Brassica oleracea HOM05D006936 ORTHO05D008273 3.8e-22 109.8 182 37.4
BraA01t01769Z Brassica rapa HOM05D006936 ORTHO05D008273 6.5e-22 109.0 195 36.9
Os05g0538900 Oryza sativa ssp. japonica HOM05D006936 ORTHO05D008273 3.6e-20 103.2 119 47.9
Nn1g03514 Nelumbo nucifera HOM05D006936 ORTHO05D008273 6.1e-20 102.4 171 40.4
Hma1.2p1_0738F.1_g211130 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 3.7e-17 93.2 130 43.8
CANSAT11G0469 Cannabis sativa HOM05D006936 ORTHO05D008273 6.3e-17 92.4 171 36.3
CARHR234570 Cardamine hirsuta HOM05D006936 ORTHO05D008273 1.2e-15 88.2 128 43.0
Actinidia24797 Actinidia chinensis HOM05D006936 ORTHO05D008273 3.5e-15 86.7 131 42.7
Aa31LG5G12010 Aethionema arabicum HOM05D006936 ORTHO05D008273 6.5e-14 82.4 166 33.7
Mapoly0093s0007 Marchantia polymorpha HOM05D006936 ORTHO05D008273 3.2e-13 80.1 155 30.3
Pp3c15_25830 Physcomitrium patens HOM05D006936 ORTHO05D008273 7.2e-13 79.0 142 34.5
Dinv40761 Davidia involucrata HOM05D006936 ORTHO05D008273 8.2e-09 65.5 138 37.0
AUR62015785 Chenopodium quinoa HOM05D000355 ORTHO05D000227 4.1e-08 63.2 55 63.6
Ah.06g185850 Amaranthus hybridus HOM05D006936 ORTHO05D008273 2.9e-06 57.0 73 49.3


User provided reference genes

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