Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund23091 Selenicereus undatus HOM05D005351 ORTHO05D006542 0.0e+00 1728.0 960 100.0
AUR62035679 Chenopodium quinoa HOM05D005351 ORTHO05D006542 2.2e-209 733.4 980 49.6
AUR62017130 Chenopodium quinoa HOM05D005351 ORTHO05D006542 4.9e-209 732.3 991 49.5
EL10Ac4g07541 Beta vulgaris HOM05D005351 ORTHO05D006542 4.1e-195 686.0 1052 48.0
Ah.06g181500 Amaranthus hybridus HOM05D005351 ORTHO05D006542 6.5e-185 652.1 1028 45.9
TAR626G0279 Trochodendron aralioides HOM05D005351 ORTHO05D006542 5.6e-144 516.2 1033 41.1
CSS0045517 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 3.7e-140 503.4 1017 39.1
CSS0029070 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 8.3e-140 502.3 1017 39.1
MD11G1037100 Malus domestica HOM05D005351 ORTHO05D006542 4.0e-134 483.4 999 40.5
Dinv40885 Davidia involucrata HOM05D005351 ORTHO05D006542 8.3e-132 475.7 961 41.1
Sabra16G0244200 Salix brachista HOM05D005351 ORTHO05D006542 7.1e-131 472.6 1005 39.6
Duzib213G0009 Durio zibethinus HOM05D005351 ORTHO05D006542 1.9e-128 464.5 1011 38.8
Nn1g02046 Nelumbo nucifera HOM05D005351 ORTHO05D006542 2.5e-128 464.2 1043 38.4
FAN21G2745 Fragaria x ananassa HOM05D005351 ORTHO05D006542 3.6e-127 460.3 988 37.9
FAN11G1247 Fragaria x ananassa HOM05D005351 ORTHO05D006542 4.7e-127 459.9 992 37.6
Cfa021891 Carpinus fangiana HOM05D005351 ORTHO05D006542 1.4e-126 458.4 1005 38.7
FAN25G1298 Fragaria x ananassa HOM05D005351 ORTHO05D006542 9.9e-125 452.2 1000 37.5
Prupe.6G028400 Prunus persica HOM05D005351 ORTHO05D006542 1.3e-124 451.8 946 39.4
Haze_09867 Corylus avellana HOM05D005351 ORTHO05D006542 3.8e-124 450.3 1013 38.0
FAN16G2746 Fragaria x ananassa HOM05D005351 ORTHO05D006542 6.4e-124 449.5 992 37.2
Actinidia03651 Actinidia chinensis HOM05D005351 ORTHO05D006542 8.4e-124 449.1 986 37.7
Nitab4.5_0005478g0030 Nicotiana tabacum HOM05D005351 ORTHO05D006542 7.8e-122 442.6 998 38.2
CAN.G492.50 Capsicum annuum HOM05D005351 ORTHO05D006542 3.0e-121 440.7 998 38.2
Gorai.009G450800 Gossypium raimondii HOM05D005351 ORTHO05D006542 4.3e-120 436.8 1028 39.9
Cc05_g15290 Coffea canephora HOM05D005351 ORTHO05D006542 2.1e-119 434.5 1034 37.1
TWI38G1324 Tripterygium wilfordii HOM05D005351 ORTHO05D006542 6.2e-119 433.0 1018 37.3
Lj8A180G96 Lonicera japonica HOM05D005351 ORTHO05D006542 8.1e-119 432.6 1013 37.2
Thecc.07G007900 Theobroma cacao HOM05D005351 ORTHO05D006542 8.1e-119 432.6 1012 39.2
Gohir.D05G384000 Gossypium hirsutum HOM05D005351 ORTHO05D006542 1.4e-118 431.8 1029 39.9
Gohir.A04G005700 Gossypium hirsutum HOM05D005351 ORTHO05D006542 2.4e-118 431.0 1027 40.3
PGSC0003DMG400014404 Solanum tuberosum HOM05D005351 ORTHO05D006542 4.0e-118 430.3 1001 38.1
Nitab4.5_0003328g0090 Nicotiana tabacum HOM05D005351 ORTHO05D006542 5.8e-117 426.4 1009 38.0
Oeu049420.1 Olea europaea HOM05D005351 ORTHO05D006542 7.6e-117 426.0 1016 38.3
Migut.M01635 Erythranthe guttata HOM05D005351 ORTHO05D006542 1.7e-116 424.9 997 37.9
RcHm_v2.0_Chr5g0075571 Rosa chinensis HOM05D005351 ORTHO05D006542 2.9e-116 424.1 936 36.8
TWI38G2212 Tripterygium wilfordii HOM05D005351 ORTHO05D006542 8.4e-116 422.5 1042 35.7
CsaV3_7G023840 Cucumis sativus L. HOM05D005351 ORTHO05D006542 3.2e-115 420.6 1003 37.0
MD03G1035400 Malus domestica HOM05D005351 ORTHO05D006542 4.6e-114 416.8 936 37.1
Sed0019267 Sechium edule HOM05D005351 ORTHO05D006542 7.8e-114 416.0 1010 36.2
MSTRG.15808 Avicennia marina HOM05D005351 ORTHO05D006542 5.1e-113 413.3 995 38.6
VMungo0540G1402 Vigna mungo HOM05D005351 ORTHO05D006542 6.6e-113 412.9 1021 35.7
Manes.01G003500 Manihot esculenta HOM05D005351 ORTHO05D006542 1.5e-112 411.8 1013 36.6
Phvul.006G059260 Phaseolus vulgaris HOM05D005351 ORTHO05D006542 1.3e-111 408.7 1034 35.2
Lj6g0009098 Lotus japonicus HOM05D005351 ORTHO05D006542 8.1e-111 406.0 1024 37.0
DCAR_013254 Daucus carota HOM05D005351 ORTHO05D006542 4.0e-110 403.7 1013 37.9
COL.COLO4_07741 Corchorus olitorius HOM05D005351 ORTHO05D006542 2.6e-109 401.0 1013 36.5
QL08p002685 Quercus lobata HOM05D005351 ORTHO05D006542 4.5e-109 400.2 956 38.1
PGR083G0334 Punica granatum HOM05D005351 ORTHO05D006542 9.9e-109 399.1 1024 35.3
vmacro09623 Vaccinium macrocarpon HOM05D005351 ORTHO05D006542 1.3e-108 398.7 989 36.9
SalBow8G3039 Salvia bowleyana HOM05D005351 ORTHO05D006542 1.7e-108 398.3 1006 39.0
THA.LOC104815687 Tarenaya hassleriana HOM05D005351 ORTHO05D006542 2.9e-108 397.5 1001 35.5
CiPaw.12G140700 Carya illinoinensis HOM05D005351 ORTHO05D006542 7.1e-107 392.9 809 41.2
HanXRQChr11g0334131 Helianthus annuus HOM05D005351 ORTHO05D006542 7.1e-107 392.9 986 35.4
Sc03g0011530 Simmondsia chinensis HOM05D005351 ORTHO05D006542 1.6e-106 391.7 732 44.0
Nn3g19476 Nelumbo nucifera HOM05D005351 ORTHO05D006542 4.6e-106 390.2 987 36.5
Rhsim04G0010500 Rhododendron simsii HOM05D005351 ORTHO05D006542 1.3e-105 388.7 1122 35.7
Ca_12455_v3 Cicer arietinum L. HOM05D005351 ORTHO05D006542 2.3e-105 387.9 1005 35.0
Medtr3g461030 Medicago truncatula HOM05D005351 ORTHO05D006542 9.6e-104 382.5 1021 35.2
GSVIVG01014743001 Vitis vinifera HOM05D005351 ORTHO05D006542 1.6e-103 381.7 1016 34.5
Dinv10362 Davidia involucrata HOM05D005351 ORTHO05D006542 2.1e-103 381.3 875 40.0
PSO210G4843 Papaver somniferum HOM05D005351 ORTHO05D006542 2.1e-103 381.3 999 35.4
AT3G13225 Arabidopsis thaliana HOM05D005351 ORTHO05D006542 5.3e-102 376.7 999 35.3
TPR.G17956 Trifolium pratense HOM05D005351 ORTHO05D006542 5.3e-102 376.7 1013 34.9
Sp3g11430 Schrenkiella parvula HOM05D005351 ORTHO05D006542 7.6e-101 372.9 1009 35.0
Potri.001G371600 Populus trichocarpa HOM05D005351 ORTHO05D006542 4.9e-100 370.2 860 38.5
PSO210G4950 Papaver somniferum HOM05D005351 ORTHO05D006542 3.2e-99 367.5 1004 34.9
BcaC09g48295 Brassica carinata HOM05D005351 ORTHO05D006542 1.2e-98 365.5 1017 35.9
ECA236G3149 Erigeron canadensis HOM05D005351 ORTHO05D006542 1.2e-98 365.5 981 34.5
Lalb_Chr15g0082311 Lupinus albus HOM05D005351 ORTHO05D006542 2.1e-98 364.8 1020 36.2
Carub.0003s1261 Capsella rubella HOM05D005351 ORTHO05D006542 1.8e-97 361.7 1006 35.2
Psat5g166400 Pisum sativum HOM05D005351 ORTHO05D006542 1.8e-97 361.7 1049 34.1
Eucgr.F02026 Eucalyptus grandis HOM05D005351 ORTHO05D006542 8.7e-97 359.4 838 39.9
BolC1t05130H Brassica oleracea HOM05D005351 ORTHO05D006542 1.9e-96 358.2 1024 35.6
Cpa.g.sc12.108 Carica papaya HOM05D005351 ORTHO05D006542 1.9e-96 358.2 997 33.5
FvH4_3g42241 Fragaria vesca HOM05D005351 ORTHO05D006542 1.9e-96 358.2 922 35.0
Glyma.08G332700 Glycine max HOM05D005351 ORTHO05D006542 2.6e-93 347.8 868 36.4
BcaB04g21006 Brassica carinata HOM05D005351 ORTHO05D006542 4.9e-92 343.6 1003 33.6
BraA01t04066Z Brassica rapa HOM05D005351 ORTHO05D006542 1.4e-91 342.0 1025 33.9
ClCG09G021540 Citrullus lanatus HOM05D005351 ORTHO05D006542 4.2e-91 340.5 1024 32.7
Solyc10g005850.4 Solanum lycopersicum HOM05D005351 ORTHO05D006542 4.2e-91 340.5 938 36.4
Sopen10g001810 Solanum pennellii HOM05D005351 ORTHO05D006542 9.3e-91 339.3 927 36.0
ATR0751G017 Amborella trichopoda HOM05D005351 ORTHO05D006542 1.6e-90 338.6 1060 33.2
Aqoxy1G04296 Aquilegia oxysepala HOM05D005351 ORTHO05D006542 6.1e-90 336.7 1024 33.2
MBI14_g37362_MAGBIO Magnolia biondii HOM05D005351 ORTHO05D006542 1.8e-89 335.1 997 37.3
unitig_0.g707 Utricularia gibba HOM05D005351 ORTHO05D006542 1.8e-89 335.1 989 32.5
Thhalv10020110m.g Eutrema salsugineum HOM05D005351 ORTHO05D006542 1.1e-88 332.4 815 36.7
SGA_v2.0_scaffold168G38576 Striga asiatica HOM05D005351 ORTHO05D006542 1.1e-88 332.4 819 35.4
Ciclev10007493m.g Citrus clementina HOM05D005351 ORTHO05D006542 2.8e-87 327.8 831 36.9
CANSAT11G0508 Cannabis sativa HOM05D005351 ORTHO05D006542 3.7e-87 327.4 864 36.0
Aa31LG8G460 Aethionema arabicum HOM05D005351 ORTHO05D006542 6.3e-87 326.6 1044 33.8
Hma1.2p1_0193F.1_g083920 Hydrangea macrophylla HOM05D005351 ORTHO05D006542 2.9e-84 317.8 1081 32.8
Glyma.18G074300 Glycine max HOM05D005351 ORTHO05D006542 3.8e-84 317.4 863 35.2
C01p51820 Brassica napus HOM05D005351 ORTHO05D006542 5.5e-83 313.5 953 34.1
A01p40300 Brassica napus HOM05D005351 ORTHO05D006542 1.8e-81 308.5 948 33.3
CARHR087840 Cardamine hirsuta HOM05D005351 ORTHO05D006542 2.8e-79 301.2 821 34.0
HPP92_017874 Vanilla planifolia HOM05D005351 ORTHO05D006542 1.1e-78 299.3 966 33.5
Peaxi162Scf00018g00155 Petunia axillaris HOM05D005351 ORTHO05D006542 1.8e-78 298.5 930 34.7
Os06g0298400 Oryza sativa ssp. japonica HOM05D005351 ORTHO05D006542 3.1e-78 297.7 1014 32.5
MELO3C024969.2 Cucumis melo HOM05D005351 ORTHO05D006542 2.0e-77 295.0 906 33.7
AL3G25030 Arabidopsis lyrata HOM05D005351 ORTHO05D006542 7.7e-77 293.1 853 34.3
CDE05G2589 Ceratophyllum demersum HOM05D005351 ORTHO05D006542 7.7e-77 293.1 984 32.0
SEGI_31992 Sequoiadendron giganteum HOM05D005351 ORTHO05D006542 1.1e-75 289.3 1114 30.8
Atru.chr2.3836 Acer truncatum HOM05D005351 ORTHO05D006542 7.9e-74 283.1 760 38.6
arahy.Tifrunner.gnm1.ann1.1R5J8M Arachis hypogaea HOM05D005351 ORTHO05D006542 2.3e-73 281.6 985 32.2
Zm00001eb381020 Zea mays HOM05D005351 ORTHO05D006542 2.6e-72 278.1 1011 31.4
Lsat_1_v5_gn_7_114900 Lactuca sativa HOM05D005351 ORTHO05D006542 1.7e-63 248.8 1064 30.7
arahy.Tifrunner.gnm1.ann1.LDHF9L Arachis hypogaea HOM05D005351 ORTHO05D006542 1.1e-62 246.1 985 30.3
Zm00001eb281160 Zea mays HOM05D005351 ORTHO05D006542 7.2e-59 233.4 997 29.1
CDE05G0998 Ceratophyllum demersum HOM05D005351 ORTHO05D006542 1.2e-56 226.1 954 28.7
PSO782G2183 Papaver somniferum HOM05D005351 ORTHO05D006542 4.4e-48 197.6 156 68.6
Oeu017994.1 Olea europaea HOM05D005351 ORTHO05D006542 7.2e-43 180.3 152 65.1
CSS0030315 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 1.4e-38 166.0 425 33.4
CSS0028997 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 1.8e-38 165.6 419 33.7
MBI14_g27041_MAGBIO Magnolia biondii HOM05D005351 ORTHO05D006542 2.5e-35 155.2 136 61.8
CBR_g12012 Chara braunii HOM05D005351 ORTHO05D006542 4.4e-32 144.4 185 47.6
Actinidia00844 Actinidia chinensis HOM05D005351 ORTHO05D006542 1.6e-29 136.0 449 30.7
AagrBONN_evm.TU.Sc2ySwM_368.1722__1723 Anthoceros agrestis HOM05D005351 ORTHO05D006542 2.7e-29 135.2 1094 23.9
SMO164G0196 Selaginella moellendorffii HOM05D005351 ORTHO05D006542 1.3e-28 132.9 158 51.3
Pp3c7_8580 Physcomitrium patens HOM05D005351 ORTHO05D006542 1.2e-26 126.3 1036 24.3
HPP92_028497 Vanilla planifolia HOM05D005351 ORTHO05D006542 2.2e-23 115.5 161 47.8
Hma1.2p1_3473F.1_g336240 Hydrangea macrophylla HOM05D005351 ORTHO05D006542 1.4e-22 112.8 292 38.0
Hma1.2p1_3473F.1_g336230 Hydrangea macrophylla HOM05D005351 ORTHO05D006542 6.6e-20 104.0 84 65.5
Lsat_1_v5_gn_6_88041 Lactuca sativa HOM05D005351 ORTHO05D006542 5.6e-19 100.9 226 37.2
vmacro11082 Vaccinium macrocarpon HOM05D000009 ORTHO05D006542 7.3e-19 100.5 98 60.2
Dinv10361 Davidia involucrata HOM05D005351 ORTHO05D006542 2.3e-17 95.5 73 57.5
AagrBONN_evm.TU.Sc2ySwM_368.1723 Anthoceros agrestis HOM05D005351 ORTHO05D006542 3.2e-14 85.1 98 55.1
Cre09.g388430 Chlamydomonas reinhardtii HOM05D005351 ORTHO05D006542 1.2e-13 83.2 187 32.1
Peaxi162Scf00018g00154 Petunia axillaris HOM05D005351 ORTHO05D006542 6.0e-13 80.9 60 68.3
CiPaw.12G140800 Carya illinoinensis HOM05D005351 ORTHO05D006542 1.3e-12 79.7 128 43.0
Solyc10g005860.3 Solanum lycopersicum HOM05D005351 ORTHO05D006542 6.6e-12 77.4 60 66.7
Oeu017995.1 Olea europaea HOM05D005351 ORTHO05D006542 3.4e-08 65.1 260 32.3
MCO09G310 Micromonas commoda HOM05D005351 ORTHO05D006542 7.1e-06 57.4 200 27.5


User provided reference genes

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