Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund22907 Selenicereus undatus HOM05D008654 ORTHO05D010476 0.0e+00 1663.7 863 100.0
Hund22765 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.1e-77 295.8 213 73.2
Hund20796 Selenicereus undatus HOM05D008654 ORTHO05D010476 4.5e-36 157.5 114 69.3
Hund15401 Selenicereus undatus HOM05D008654 ORTHO05D010476 5.9e-36 157.1 152 57.2
Sc13g0006520 Simmondsia chinensis HOM05D008654 ORTHO05D010476 5.2e-32 144.1 204 40.2
Sc14g0008150 Simmondsia chinensis HOM05D008654 ORTHO05D010476 6.3e-30 137.1 189 41.3
AUR62034555 Chenopodium quinoa HOM05D009516 ORTHO05D010476 2.3e-19 102.1 185 33.5
EL10Ac8g19342 Beta vulgaris HOM05D000107 ORTHO05D000062 1.4e-16 92.8 255 26.3
AUR62025836 Chenopodium quinoa HOM05D000107 ORTHO05D010932 5.2e-16 90.9 180 31.7
Hund22860 Selenicereus undatus HOM05D000107 ORTHO05D010932 1.5e-15 89.4 154 32.5
Sc08g0005840 Simmondsia chinensis HOM05D008654 ORTHO05D010476 1.5e-15 89.4 91 49.5
AUR62042482 Chenopodium quinoa HOM05D000107 ORTHO05D010932 4.4e-15 87.8 153 33.3
AUR62007687 Chenopodium quinoa HOM05D000107 ORTHO05D010932 2.2e-14 85.5 190 30.0
AUR62029573 Chenopodium quinoa HOM05D000107 ORTHO05D010932 2.2e-14 85.5 190 30.0
Sc08g0006040 Simmondsia chinensis HOM05D008654 ORTHO05D010476 2.2e-14 85.5 164 38.4
AUR62002886 Chenopodium quinoa HOM05D000107 ORTHO05D010932 4.9e-14 84.3 190 30.0
AUR62016577 Chenopodium quinoa HOM05D000107 ORTHO05D010932 6.4e-14 84.0 190 29.5
AUR62034130 Chenopodium quinoa HOM05D000107 ORTHO05D010932 8.3e-14 83.6 191 29.3
Sc14g0004940 Simmondsia chinensis HOM05D008654 ORTHO05D010476 8.3e-14 83.6 159 36.5
Sc01g0004430 Simmondsia chinensis HOM05D008654 ORTHO05D010476 1.1e-13 83.2 107 49.5
AUR62041941 Chenopodium quinoa HOM05D000107 ORTHO05D010932 1.4e-13 82.8 190 29.5
Hund03722 Selenicereus undatus HOM05D000107 ORTHO05D010932 1.8e-13 82.4 204 27.9
Sc17g0002790 Simmondsia chinensis HOM05D008654 ORTHO05D010476 1.8e-13 82.4 151 40.4
AUR62015848 Chenopodium quinoa HOM05D009516 ORTHO05D010476 3.2e-13 81.6 239 27.6
AUR62041359 Chenopodium quinoa HOM05D000107 ORTHO05D010932 5.4e-13 80.9 190 28.4
Sc10g0008320 Simmondsia chinensis HOM05D008654 ORTHO05D010476 5.4e-13 80.9 151 39.7
AUR62040134 Chenopodium quinoa HOM05D000107 ORTHO05D010932 1.2e-12 79.7 190 29.5
EL10Ac2g03557 Beta vulgaris HOM05D000107 ORTHO05D010932 3.5e-12 78.2 174 31.6
Sc09g0008760 Simmondsia chinensis HOM05D008654 ORTHO05D010476 7.8e-12 77.0 104 46.2
AUR62042470 Chenopodium quinoa HOM05D000107 ORTHO05D010932 1.0e-11 76.6 180 26.7
Sc14g0003090 Simmondsia chinensis HOM05D008654 ORTHO05D010476 1.7e-11 75.9 117 42.7
QL93p0093_0054 Quercus lobata HOM05D003120 ORTHO05D003568 3.9e-11 74.7 160 33.1
Sc08g0001890 Simmondsia chinensis HOM05D028797 ORTHO05D030612 3.9e-11 74.7 101 38.6
CiPaw.14G126400 Carya illinoinensis HOM05D003120 ORTHO05D003568 5.0e-11 74.3 195 29.7
Sc11g0006680 Simmondsia chinensis HOM05D008654 ORTHO05D010476 5.0e-11 74.3 91 47.3
Sc02g0005120 Simmondsia chinensis HOM05D008654 ORTHO05D010476 6.6e-11 73.9 120 42.5
Sc26g0002460 Simmondsia chinensis HOM05D008654 ORTHO05D010476 6.6e-11 73.9 214 35.0
Haze_23034 Corylus avellana HOM05D003120 ORTHO05D003568 1.5e-10 72.8 197 29.9
AUR62026455 Chenopodium quinoa HOM05D007453 ORTHO05D009223 1.9e-10 72.4 154 31.8
Sc23g0004280 Simmondsia chinensis HOM05D008654 ORTHO05D010476 2.5e-10 72.0 103 43.7
Cfa009670 Carpinus fangiana HOM05D003120 ORTHO05D003568 5.6e-10 70.9 197 29.9
Hund11127 Selenicereus undatus HOM05D000107 ORTHO05D010932 5.6e-10 70.9 184 27.2
FvH4_3g22812 Fragaria vesca HOM05D023520 ORTHO05D025365 1.2e-09 69.7 164 29.3
Sc05g0004570 Simmondsia chinensis HOM05D008654 ORTHO05D010476 1.6e-09 69.3 59 54.2
PGR004G1992 Punica granatum HOM05D000791 ORTHO05D000669 3.6e-09 68.2 244 23.4
RcHm_v2.0_Chr4g0402051 Rosa chinensis HOM05D000791 ORTHO05D000669 3.6e-09 68.2 109 33.9
AUR62026517 Chenopodium quinoa HOM05D009516 ORTHO05D010476 4.7e-09 67.8 188 30.9
TWI73G0990 Tripterygium wilfordii HOM05D003120 ORTHO05D000669 4.7e-09 67.8 174 26.4
TWI38G2136 Tripterygium wilfordii HOM05D003120 ORTHO05D000669 6.2e-09 67.4 174 27.0
EL10As4g23432 Beta vulgaris HOM05D000107 ORTHO05D010932 1.8e-08 65.9 161 27.3
Sc06g0004390 Simmondsia chinensis HOM05D028797 ORTHO05D030612 1.8e-08 65.9 77 45.5
Sc06g0005410 Simmondsia chinensis HOM05D001635 ORTHO05D001523 2.3e-08 65.5 123 39.8
Sc04g0004200 Simmondsia chinensis HOM05D008654 ORTHO05D010476 4.0e-08 64.7 108 40.7
MBI11_g30647_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 6.8e-08 63.9 108 31.5
Lj5g0025673 Lotus japonicus HOM05D001309 ORTHO05D000385 8.9e-08 63.5 219 26.0
Sopen09g001250 Solanum pennellii HOM05D008291 ORTHO05D000669 8.9e-08 63.5 208 27.4
Sc19g0004530 Simmondsia chinensis HOM05D008654 ORTHO05D010476 1.2e-07 63.2 57 54.4
Dinv04171 Davidia involucrata HOM05D010146 ORTHO05D000385 1.5e-07 62.8 83 38.6
Dinv09828 Davidia involucrata HOM05D001309 ORTHO05D000385 1.5e-07 62.8 83 38.6
Solyc09g005280.3 Solanum lycopersicum HOM05D008291 ORTHO05D000669 1.5e-07 62.8 208 27.4
Peaxi162Scf00091g00169 Petunia axillaris HOM05D003120 ORTHO05D003568 2.0e-07 62.4 205 27.8
Rhsim09G0075900 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.0e-07 62.4 81 39.5
Hund18201 Selenicereus undatus HOM05D000185 ORTHO05D010932 2.0e-07 62.4 157 30.6
Nitab4.5_0000111g0060 Nicotiana tabacum HOM05D008455 ORTHO05D009597 3.4e-07 61.6 80 38.8
Hund10130 Selenicereus undatus HOM05D018500 ORTHO05D382000 3.4e-07 61.6 86 39.5
Manes.11G024650 Manihot esculenta HOM05D008455 ORTHO05D009597 5.8e-07 60.8 169 30.8
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.5e-07 60.5 167 24.6
Manes.06G115750 Manihot esculenta HOM05D009290 ORTHO05D009597 7.5e-07 60.5 128 32.8
AUR62034756 Chenopodium quinoa HOM05D000107 ORTHO05D010932 1.3e-06 59.7 73 42.5
TAR633G0853 Trochodendron aralioides HOM05D001163 ORTHO05D001769 1.7e-06 59.3 104 34.6
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 2.2e-06 58.9 229 24.5
Rhsim10G0033700 Rhododendron simsii HOM05D001309 ORTHO05D000385 2.2e-06 58.9 82 37.8
Sc12g0006970 Simmondsia chinensis HOM05D028797 ORTHO05D030612 2.2e-06 58.9 86 34.9
Manes.17G118642 Manihot esculenta HOM05D008455 ORTHO05D009597 2.9e-06 58.5 98 34.7
Manes.17G119328 Manihot esculenta HOM05D008455 ORTHO05D009597 2.9e-06 58.5 98 34.7
Rhsim06G0190000 Rhododendron simsii HOM05D001309 ORTHO05D000385 2.9e-06 58.5 85 36.5
Dinv04329 Davidia involucrata HOM05D010146 ORTHO05D000385 3.7e-06 58.2 80 37.5
Dinv11732 Davidia involucrata HOM05D010146 ORTHO05D000385 3.7e-06 58.2 80 37.5
Dinv12592 Davidia involucrata HOM05D010146 ORTHO05D000385 3.7e-06 58.2 80 37.5
Dinv15672 Davidia involucrata HOM05D010146 ORTHO05D000385 3.7e-06 58.2 80 37.5
Manes.12G086248 Manihot esculenta HOM05D009290 ORTHO05D009597 3.7e-06 58.2 94 35.1
Peaxi162Scf00050g00139 Petunia axillaris HOM05D001309 ORTHO05D000385 3.7e-06 58.2 166 28.9
Sc11g0006850 Simmondsia chinensis HOM05D001309 ORTHO05D000385 3.7e-06 58.2 115 34.8
Sopen01g033440 Solanum pennellii HOM05D003120 ORTHO05D003568 3.7e-06 58.2 200 21.5
MBI15_g36793_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.9e-06 57.8 73 38.4
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 4.9e-06 57.8 73 37.0
TWI18G1095 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 4.9e-06 57.8 160 26.2
TAR622G0651 Trochodendron aralioides HOM05D000141 ORTHO05D000385 4.9e-06 57.8 100 33.0
Sc02g0004720 Simmondsia chinensis HOM05D008654 ORTHO05D010476 6.4e-06 57.4 72 45.8
Dinv12401 Davidia involucrata HOM05D010146 ORTHO05D000385 8.3e-06 57.0 80 36.2
Glyma.03G071600 Glycine max HOM05D001309 ORTHO05D000385 8.3e-06 57.0 83 38.6
Nitab4.5_0000892g0160 Nicotiana tabacum HOM05D003120 ORTHO05D003568 8.3e-06 57.0 200 24.0
Nitab4.5_0008635g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.3e-06 57.0 95 36.8


User provided reference genes

Program Settings