Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund22811 Selenicereus undatus HOM05D007892 ORTHO05D009211 3.8e-294 1014.2 565 100.0
AUR62019468 Chenopodium quinoa HOM05D007892 ORTHO05D009211 1.6e-58 231.5 591 38.6
Ah.06g184550 Amaranthus hybridus HOM05D007892 ORTHO05D009211 8.0e-50 202.6 424 37.7
AUR62036164 Chenopodium quinoa HOM05D007892 ORTHO05D009211 3.0e-49 200.7 433 37.9
EL10Ac4g08232 Beta vulgaris HOM05D007892 ORTHO05D009211 2.9e-47 194.1 600 36.7
Dinv20199 Davidia involucrata HOM05D007892 ORTHO05D009211 2.0e-32 144.8 549 32.2
Cfa020559 Carpinus fangiana HOM05D007892 ORTHO05D009211 4.4e-32 143.7 607 30.8
CANSAT56G4073 Cannabis sativa HOM05D007892 ORTHO05D009211 3.2e-30 137.5 495 32.5
FAN21G3246 Fragaria x ananassa HOM05D007892 ORTHO05D009211 6.0e-29 133.3 590 32.7
FAN11G1893 Fragaria x ananassa HOM05D007892 ORTHO05D009211 5.1e-28 130.2 497 34.0
Ciclev10007798m.g Citrus clementina HOM05D007892 ORTHO05D009211 1.5e-27 128.6 416 32.9
GSVIVG01014294001 Vitis vinifera HOM05D007892 ORTHO05D009211 1.9e-27 128.3 582 31.4
QL08p022727 Quercus lobata HOM05D007892 ORTHO05D009211 1.2e-26 125.6 647 31.1
CiPaw.11G172000 Carya illinoinensis HOM05D007892 ORTHO05D009211 2.1e-26 124.8 587 30.8
FvH4_3g19480 Fragaria vesca HOM05D007892 ORTHO05D009211 4.7e-26 123.6 598 32.6
CSS0030192 Camellia sinensis var. sinensis HOM05D007892 ORTHO05D009211 6.2e-26 123.2 568 33.3
FAN25G2763 Fragaria x ananassa HOM05D007892 ORTHO05D009211 8.1e-26 122.9 592 33.8
FAN16G1540 Fragaria x ananassa HOM05D007892 ORTHO05D009211 1.5e-24 118.6 588 32.7
MD03G1231500 Malus domestica HOM05D007892 ORTHO05D009211 9.9e-24 115.9 630 32.4
Lalb_Chr01g0016751 Lupinus albus HOM05D007892 ORTHO05D009211 1.7e-23 115.2 698 29.7
TAR626G1218 Trochodendron aralioides HOM05D007892 ORTHO05D009211 1.7e-23 115.2 571 29.6
MD11G1252600 Malus domestica HOM05D007892 ORTHO05D009211 2.2e-23 114.8 585 30.3
CSS0005747 Camellia sinensis var. sinensis HOM05D007892 ORTHO05D009211 2.9e-23 114.4 568 32.7
Thecc.07G095700 Theobroma cacao HOM05D007892 ORTHO05D009211 2.9e-23 114.4 552 29.2
Manes.15G089300 Manihot esculenta HOM05D007892 ORTHO05D009211 3.8e-23 114.0 653 29.1
Glyma.12G226900 Glycine max HOM05D007892 ORTHO05D009211 6.4e-23 113.2 527 31.1
RcHm_v2.0_Chr5g0032741 Rosa chinensis HOM05D007892 ORTHO05D009211 6.4e-23 113.2 409 32.5
Haze_09454 Corylus avellana HOM05D007892 ORTHO05D009211 2.4e-22 111.3 609 28.9
Rhsim06G0202400 Rhododendron simsii HOM05D007892 ORTHO05D009211 5.4e-22 110.2 509 34.0
DCAR_019569 Daucus carota HOM05D007892 ORTHO05D009211 4.6e-21 107.1 422 30.1
Oeu037370.2 Olea europaea HOM05D007892 ORTHO05D009211 6.0e-21 106.7 481 30.1
Sc03g0010140 Simmondsia chinensis HOM05D007892 ORTHO05D009211 7.8e-21 106.3 502 32.9
Duzib213G0678 Durio zibethinus HOM05D007892 ORTHO05D009211 1.3e-20 105.5 623 28.1
Prupe.4G176400 Prunus persica HOM05D007892 ORTHO05D009211 1.3e-20 105.5 504 30.0
Potri.011G115900 Populus trichocarpa HOM05D007892 ORTHO05D009211 3.9e-20 104.0 591 30.1
Dinv14936 Davidia involucrata HOM05D007892 ORTHO05D009211 1.9e-19 101.7 554 30.7
Medtr2g078660 Medicago truncatula HOM05D007892 ORTHO05D009211 1.2e-18 99.0 495 26.9
HanXRQChr11g0351991 Helianthus annuus HOM05D007892 ORTHO05D009211 1.6e-18 98.6 464 30.6
COL.COLO4_36713 Corchorus olitorius HOM05D007892 ORTHO05D009211 4.7e-18 97.1 605 29.1
Lj3g0007189 Lotus japonicus HOM05D007892 ORTHO05D009211 6.2e-18 96.7 548 29.2
Gohir.D01G048000 Gossypium hirsutum HOM05D007892 ORTHO05D009211 8.1e-18 96.3 593 28.2
TWI38G1391 Tripterygium wilfordii HOM05D007892 ORTHO05D009211 1.1e-17 95.9 635 29.8
Gorai.002G067800 Gossypium raimondii HOM05D007892 ORTHO05D009211 1.8e-17 95.1 568 27.6
Duzib268G0896 Durio zibethinus HOM05D007892 ORTHO05D009211 3.1e-17 94.4 683 26.4
Eucgr.F01161 Eucalyptus grandis HOM05D007892 ORTHO05D009211 1.5e-16 92.0 621 28.3
vmacro11887 Vaccinium macrocarpon HOM05D007892 ORTHO05D009211 1.3e-15 89.0 540 31.9
Aqoxy1G02331 Aquilegia oxysepala HOM05D007892 ORTHO05D009211 3.8e-15 87.4 692 28.8
Ca_03530_v3 Cicer arietinum L. HOM05D007892 ORTHO05D009211 4.9e-15 87.0 626 28.4
Cc05_g11770 Coffea canephora HOM05D007892 ORTHO05D009211 8.4e-15 86.3 490 25.7
Sabra11G0101600 Salix brachista HOM05D007892 ORTHO05D009211 1.1e-14 85.9 662 29.0
VMungo0331G1677 Vigna mungo HOM05D007892 ORTHO05D009211 1.1e-14 85.9 464 28.4
CsaV3_4G033500 Cucumis sativus L. HOM05D007892 ORTHO05D009211 3.2e-14 84.3 505 29.9
Gohir.A01G061400 Gossypium hirsutum HOM05D007892 ORTHO05D009211 3.2e-14 84.3 455 26.8
Lj1A840G45 Lonicera japonica HOM05D007892 ORTHO05D009211 9.3e-14 82.8 476 25.6
Glyma.13G273900 Glycine max HOM05D007892 ORTHO05D009211 1.6e-13 82.0 586 29.0
Lsat_1_v5_gn_7_104640 Lactuca sativa HOM05D007892 ORTHO05D009211 4.6e-13 80.5 370 28.6
MSTRG.6820 Avicennia marina HOM05D007892 ORTHO05D009211 1.0e-12 79.3 562 31.0
Duzib244G0002 Durio zibethinus HOM05D007892 ORTHO05D009211 1.3e-12 79.0 713 26.4
ClCG11G017870 Citrullus lanatus HOM05D007892 ORTHO05D009211 2.3e-12 78.2 548 27.2
Nn1g06449 Nelumbo nucifera HOM05D007892 ORTHO05D009211 5.6e-11 73.6 417 27.1
Phvul.010G112300 Phaseolus vulgaris HOM05D007892 ORTHO05D009211 7.3e-11 73.2 463 27.6
Solyc07g062920.4 Solanum lycopersicum HOM05D021138 ORTHO05D009211 9.6e-11 72.8 572 27.1
PGSC0003DMG403012406 Solanum tuberosum HOM05D021138 ORTHO05D009211 3.6e-10 70.9 580 25.3
Atru.chr2.2419 Acer truncatum HOM05D007892 ORTHO05D009211 4.8e-10 70.5 354 28.5
Nitab4.5_0002330g0130 Nicotiana tabacum HOM05D021138 ORTHO05D009211 4.8e-10 70.5 543 27.1
arahy.Tifrunner.gnm1.ann1.8Q202K Arachis hypogaea HOM05D007892 ORTHO05D009211 6.2e-10 70.1 568 26.6
TPR.G7948 Trifolium pratense HOM05D007892 ORTHO05D009211 8.1e-10 69.7 64 67.2
Sed0012696 Sechium edule HOM05D007892 ORTHO05D009211 1.2e-08 65.9 509 27.5
unitig_37.g12567 Utricularia gibba HOM05D007892 ORTHO05D009211 2.0e-08 65.1 57 64.9
Potri.001G397001 Populus trichocarpa HOM05D007892 ORTHO05D009211 2.6e-08 64.7 535 26.0
PSO675G5502 Papaver somniferum HOM05D056025 ORTHO05D009211 9.9e-08 62.8 178 32.6
Psat0s3104g0160 Pisum sativum HOM05D007892 ORTHO05D009211 1.3e-07 62.4 482 26.1
arahy.Tifrunner.gnm1.ann1.N2Q107 Arachis hypogaea HOM05D007892 ORTHO05D009211 2.2e-07 61.6 119 39.5
CDE05G2993 Ceratophyllum demersum HOM05D007892 ORTHO05D009211 2.2e-07 61.6 64 57.8
Actinidia09702 Actinidia chinensis HOM05D007892 ORTHO05D009211 2.9e-07 61.2 414 26.6
Migut.M00782 Erythranthe guttata HOM05D007892 ORTHO05D009211 8.4e-07 59.7 516 27.5
Sopen07g031110 Solanum pennellii HOM05D021138 ORTHO05D009211 4.2e-06 57.4 551 28.5
THA.LOC104799933 Tarenaya hassleriana HOM05D012500 ORTHO05D009211 4.2e-06 57.4 290 27.6
BolC2t07910H Brassica oleracea HOM05D012500 ORTHO05D009211 7.1e-06 56.6 424 24.1


User provided reference genes

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