Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund22764 Selenicereus undatus HOM05D006017 ORTHO05D007821 1.9e-269 931.8 436 100.0
EL10Ac4g08290 Beta vulgaris HOM05D006017 ORTHO05D007821 4.7e-215 751.1 407 85.3
Sc03g0010290 Simmondsia chinensis HOM05D006017 ORTHO05D007821 5.9e-210 734.2 409 81.4
AUR62019513 Chenopodium quinoa HOM05D006017 ORTHO05D007821 1.7e-209 732.6 410 82.4
Rhsim04G0023700 Rhododendron simsii HOM05D006017 ORTHO05D007821 5.7e-205 717.6 397 82.1
vmacro09508 Vaccinium macrocarpon HOM05D006017 ORTHO05D007821 1.8e-203 712.6 413 78.9
Actinidia18784 Actinidia chinensis HOM05D006017 ORTHO05D007821 9.1e-203 710.3 397 80.6
AUR62036125 Chenopodium quinoa HOM05D006017 ORTHO05D007821 1.2e-202 709.9 413 79.7
Dinv14956 Davidia involucrata HOM05D006017 ORTHO05D007821 2.0e-202 709.1 397 79.8
Manes.03G103900 Manihot esculenta HOM05D006017 ORTHO05D007821 2.0e-202 709.1 409 76.8
MBI07_g06432_MAGBIO Magnolia biondii HOM05D006017 ORTHO05D007821 4.5e-202 708.0 408 78.4
Cfa019614 Carpinus fangiana HOM05D006017 ORTHO05D007821 1.0e-201 706.8 397 79.6
CiPaw.12G115700 Carya illinoinensis HOM05D006017 ORTHO05D007821 1.0e-201 706.8 397 79.3
TWI38G0439 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 1.0e-201 706.8 397 79.8
MSTRG.14945 Avicennia marina HOM05D006017 ORTHO05D007821 1.3e-201 706.4 397 79.6
CSS0036883 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 2.9e-201 705.3 397 79.6
GSVIVG01014248001 Vitis vinifera HOM05D006017 ORTHO05D007821 5.0e-201 704.5 408 77.9
CsaV3_4G008430 Cucumis sativus L. HOM05D006017 ORTHO05D007821 6.6e-201 704.1 397 78.8
Hma1.2p1_0416F.1_g148570 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 6.6e-201 704.1 397 79.8
Atru.chr2.2344 Acer truncatum HOM05D006017 ORTHO05D007821 8.6e-201 703.7 397 79.3
CAN.G739.4 Capsicum annuum HOM05D006017 ORTHO05D007821 1.5e-200 703.0 402 78.6
MELO3C016089.2 Cucumis melo HOM05D006017 ORTHO05D007821 1.9e-200 702.6 397 78.6
CANSAT35G1773 Cannabis sativa HOM05D006017 ORTHO05D007821 4.2e-200 701.4 397 79.6
Cpa.g.sc131.80 Carica papaya HOM05D006017 ORTHO05D007821 4.2e-200 701.4 397 79.8
Cc05_g11510 Coffea canephora HOM05D006017 ORTHO05D007821 4.2e-200 701.4 397 79.6
ClCG07G009900 Citrullus lanatus HOM05D006017 ORTHO05D007821 5.5e-200 701.0 397 78.3
Peaxi162Scf00000g00262 Petunia axillaris HOM05D006017 ORTHO05D007821 5.5e-200 701.0 397 79.6
Prupe.4G172100 Prunus persica HOM05D006017 ORTHO05D007821 5.5e-200 701.0 407 77.4
PGSC0003DMG400015330 Solanum tuberosum HOM05D006017 ORTHO05D007821 9.5e-200 700.3 397 79.6
Sed0020976 Sechium edule HOM05D006017 ORTHO05D007821 1.2e-199 699.9 403 77.4
Sopen12g005880 Solanum pennellii HOM05D006017 ORTHO05D007821 1.2e-199 699.9 397 79.3
Thecc.07G102400 Theobroma cacao HOM05D006017 ORTHO05D007821 1.2e-199 699.9 397 79.3
PGR083G0123 Punica granatum HOM05D006017 ORTHO05D007821 1.6e-199 699.5 404 78.5
Solyc12g014100.2 Solanum lycopersicum HOM05D006017 ORTHO05D007821 2.1e-199 699.1 397 79.1
FAN11G3087 Fragaria x ananassa HOM05D006017 ORTHO05D007821 2.8e-199 698.7 397 78.3
Lalb_Chr03g0030841 Lupinus albus HOM05D006017 ORTHO05D007821 6.1e-199 697.6 406 76.8
FAN16G2700 Fragaria x ananassa HOM05D006017 ORTHO05D007821 1.4e-198 696.4 397 78.3
RcHm_v2.0_Chr5g0031821 Rosa chinensis HOM05D006017 ORTHO05D007821 1.4e-198 696.4 397 78.3
Gorai.002G065000 Gossypium raimondii HOM05D006017 ORTHO05D007821 4.0e-198 694.9 402 77.9
Haze_09368 Corylus avellana HOM05D006017 ORTHO05D007821 5.2e-198 694.5 417 76.5
Glyma.12G158600 Glycine max HOM05D006017 ORTHO05D007821 5.2e-198 694.5 403 77.2
HanXRQChr03g0070991 Helianthus annuus HOM05D006017 ORTHO05D007821 5.2e-198 694.5 397 77.8
Migut.M00760 Erythranthe guttata HOM05D006017 ORTHO05D007821 2.0e-197 692.6 407 76.4
Gohir.D01G045400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 2.0e-197 692.6 402 77.6
A02p10590 Brassica napus HOM05D006017 ORTHO05D007821 5.7e-197 691.0 397 79.1
BraA02t06124Z Brassica rapa HOM05D006017 ORTHO05D007821 5.7e-197 691.0 397 79.1
Lj3g0015312 Lotus japonicus HOM05D006017 ORTHO05D007821 7.5e-197 690.6 417 75.1
CiPaw.11G165400 Carya illinoinensis HOM05D006017 ORTHO05D007821 9.8e-197 690.3 404 76.5
Lj8A152T86 Lonicera japonica HOM05D006017 ORTHO05D007821 9.8e-197 690.3 405 76.5
ECA240G4517 Erigeron canadensis HOM05D006017 ORTHO05D007821 1.3e-196 689.9 397 76.6
BcaB05g22107 Brassica carinata HOM05D006017 ORTHO05D007821 1.7e-196 689.5 397 79.3
Phvul.011G148800 Phaseolus vulgaris HOM05D006017 ORTHO05D007821 1.7e-196 689.5 397 78.1
Ca_23058_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 2.8e-196 688.7 406 76.4
Ca_30664_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 2.8e-196 688.7 406 76.4
Gohir.A01G059400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 2.8e-196 688.7 397 78.1
C02p17670 Brassica napus HOM05D006017 ORTHO05D007821 6.3e-196 687.6 397 78.8
Aqoxy1G02214 Aquilegia oxysepala HOM05D006017 ORTHO05D007821 1.4e-195 686.4 397 77.3
QL08p027671 Quercus lobata HOM05D006017 ORTHO05D007821 1.4e-195 686.4 398 77.9
Psat4g138640 Pisum sativum HOM05D006017 ORTHO05D007821 1.8e-195 686.0 397 77.8
Eucgr.F01184 Eucalyptus grandis HOM05D006017 ORTHO05D007821 3.1e-195 685.3 397 77.6
Medtr8g463280 Medicago truncatula HOM05D006017 ORTHO05D007821 9.2e-195 683.7 400 76.8
PSO541G6385 Papaver somniferum HOM05D006017 ORTHO05D007821 9.2e-195 683.7 402 78.1
DCAR_028453 Daucus carota HOM05D006017 ORTHO05D007821 1.2e-194 683.3 397 78.1
Lsat_1_v5_gn_9_98620 Lactuca sativa HOM05D006017 ORTHO05D007821 1.6e-194 682.9 406 74.4
Sp6g16110 Schrenkiella parvula HOM05D006017 ORTHO05D007821 1.6e-194 682.9 397 79.3
Carub.0008s1436 Capsella rubella HOM05D006017 ORTHO05D007821 2.0e-194 682.6 406 77.1
ATR0749G089 Amborella trichopoda HOM05D006017 ORTHO05D007821 3.5e-194 681.8 397 77.8
BcaC03g14354 Brassica carinata HOM05D006017 ORTHO05D007821 3.5e-194 681.8 397 78.3
Eucgr.F01185 Eucalyptus grandis HOM05D006017 ORTHO05D007821 3.5e-194 681.8 397 77.3
VMungo1127G0952 Vigna mungo HOM05D006017 ORTHO05D007821 4.5e-194 681.4 399 76.2
AL8G29200 Arabidopsis lyrata HOM05D006017 ORTHO05D007821 5.9e-194 681.0 406 77.1
BolC2t07897H Brassica oleracea HOM05D006017 ORTHO05D007821 7.8e-194 680.6 397 78.1
THA.LOC104811882 Tarenaya hassleriana HOM05D006017 ORTHO05D007821 7.8e-194 680.6 397 77.3
arahy.Tifrunner.gnm1.ann1.DSNA77 Arachis hypogaea HOM05D006017 ORTHO05D007821 1.0e-193 680.2 399 75.7
FAN21G1753 Fragaria x ananassa HOM05D006017 ORTHO05D007821 1.3e-193 679.9 426 73.2
arahy.Tifrunner.gnm1.ann1.FV2XB3 Arachis hypogaea HOM05D006017 ORTHO05D007821 2.3e-193 679.1 399 75.9
CARHR267270 Cardamine hirsuta HOM05D006017 ORTHO05D007821 3.8e-193 678.3 397 78.6
Aa31LG3G9950 Aethionema arabicum HOM05D006017 ORTHO05D007821 6.6e-193 677.6 397 78.3
AT5G54080 Arabidopsis thaliana HOM05D006017 ORTHO05D007821 1.9e-192 676.0 397 78.3
Potri.001G374100 Populus trichocarpa HOM05D006017 ORTHO05D007821 9.5e-192 673.7 414 75.6
Oeu061327.1 Olea europaea HOM05D006017 ORTHO05D007821 1.2e-191 673.3 433 71.1
Oeu061328.1 Olea europaea HOM05D006017 ORTHO05D007821 1.2e-191 673.3 433 71.1
PSO675G4947 Papaver somniferum HOM05D006017 ORTHO05D007821 1.4e-190 669.8 410 75.1
Nitab4.5_0003077g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 3.1e-190 668.7 402 76.1
Ah.04g164440 Amaranthus hybridus HOM05D006017 ORTHO05D007821 3.4e-189 665.2 404 77.2
Sabra16G0246500 Salix brachista HOM05D006017 ORTHO05D007821 5.4e-187 657.9 400 75.2
HPP92_003902 Vanilla planifolia HOM05D006017 ORTHO05D007821 3.0e-185 652.1 397 73.0
Os06g0103300 Oryza sativa ssp. japonica HOM05D006017 ORTHO05D007821 3.6e-183 645.2 410 72.2
Nitab4.5_0005445g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 1.5e-181 639.8 407 73.2
unitig_46.g18314 Utricularia gibba HOM05D006017 ORTHO05D007821 3.4e-181 638.6 401 71.1
Zm00001eb379510 Zea mays HOM05D006017 ORTHO05D007821 1.3e-180 636.7 414 71.3
SGA_v2.0_scaffold73G24213 Striga asiatica HOM05D006017 ORTHO05D007821 6.6e-177 624.4 432 67.6
Ciclev10008509m.g Citrus clementina HOM05D006017 ORTHO05D007821 2.8e-175 619.0 342 81.9
CDE02G3882 Ceratophyllum demersum HOM05D006017 ORTHO05D007821 6.2e-175 617.8 401 70.6
Nn1g04303 Nelumbo nucifera HOM05D006017 ORTHO05D007821 5.8e-173 611.3 347 79.8
FvH4_3g19020 Fragaria vesca HOM05D006017 ORTHO05D007821 1.2e-162 577.0 341 77.1
Mapoly0078s0002 Marchantia polymorpha HOM05D006017 ORTHO05D007821 1.3e-161 573.5 399 66.9
Hma1.2p1_0416F.1_g148580 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 3.0e-161 572.4 320 80.9
Duzib170G0488 Durio zibethinus HOM05D006017 ORTHO05D007821 1.5e-160 570.1 320 80.3
Pp3c16_940 Physcomitrium patens HOM05D006017 ORTHO05D007821 9.6e-160 567.4 409 64.8
Thhalv10013691m.g Eutrema salsugineum HOM05D006017 ORTHO05D007821 2.9e-156 555.8 397 67.3
AagrBONN_evm.TU.Sc2ySwM_228.2578 Anthoceros agrestis HOM05D006017 ORTHO05D007821 1.1e-155 553.9 391 65.0
SalBow8G4076 Salvia bowleyana HOM05D006017 ORTHO05D007821 1.1e-152 543.9 314 78.3
MD03G1237500 Malus domestica HOM05D006017 ORTHO05D007821 2.7e-146 522.7 299 78.6
SMO119G0176 Selaginella moellendorffii HOM05D006017 ORTHO05D007821 2.1e-143 513.1 398 59.8
Cre02.g091200 Chlamydomonas reinhardtii HOM05D006017 ORTHO05D007821 2.5e-131 473.0 404 56.7
TPR.G22540 Trifolium pratense HOM05D006017 ORTHO05D007821 1.5e-128 463.8 342 64.6
PRCOL_00000185 Prasinoderma coloniale HOM05D006017 ORTHO05D007821 4.8e-127 458.8 420 53.8
Glyma.06G234200 Glycine max HOM05D006017 ORTHO05D007821 2.6e-109 399.8 218 78.9
CSS0003418 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 1.8e-78 297.4 217 66.8
BcaC04g20394 Brassica carinata HOM05D006017 ORTHO05D007821 3.9e-68 263.1 380 44.7
FAN25G2436 Fragaria x ananassa HOM05D006017 ORTHO05D007821 1.8e-65 254.2 153 77.1
Glyma.06G234050 Glycine max HOM05D006017 ORTHO05D007821 1.3e-63 248.1 133 81.2
Nitab4.5_0004022g0010 Nicotiana tabacum HOM05D006017 ORTHO05D007821 7.3e-59 232.3 120 85.8
C09p44170 Brassica napus HOM05D006017 ORTHO05D017343 1.8e-57 227.6 237 53.2
Rhsim07G0153900 Rhododendron simsii HOM05D006017 ORTHO05D000252 2.9e-55 220.3 237 49.8
CSS0021316 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 1.5e-48 198.0 116 73.3
TWI38G1497 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 1.1e-46 191.8 119 73.9
MD03G1237300 Malus domestica HOM05D006017 ORTHO05D007821 1.0e-44 185.3 103 74.8
A10p11370 Brassica napus HOM05D006017 ORTHO05D007821 4.3e-43 179.9 270 42.6
SEGI_01915 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 1.8e-41 174.5 119 63.0
Oeu061326.1 Olea europaea HOM05D006017 ORTHO05D007821 2.6e-32 144.1 77 77.9
SEGI_25954 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 4.9e-31 139.8 88 68.2
TAR436G0001 Trochodendron aralioides HOM05D006017 ORTHO05D007821 2.1e-29 134.4 81 72.8
FAN25G2983 Fragaria x ananassa HOM05D006017 ORTHO05D007821 5.8e-24 116.3 89 60.7
SEGI_23248 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 1.4e-22 111.7 72 65.3
TWI38G0821 Tripterygium wilfordii HOM05D006017 ORTHO05D413584 2.5e-22 110.9 55 85.5
CSS0031230 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 2.1e-21 107.8 105 52.4
BolC9t57289H Brassica oleracea HOM05D006017 ORTHO05D104628 1.8e-20 104.8 174 38.5
arahy.Tifrunner.gnm1.ann1.EZ2Q4B Arachis hypogaea HOM05D006004 ORTHO05D006976 2.5e-19 100.9 73 64.4
BraA10t43231Z Brassica rapa HOM05D006017 ORTHO05D017343 2.3e-12 77.8 89 48.3


User provided reference genes

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